RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 DEPDC5O75140 1603 aa19.44■□□□□ 0.7
NEAT1-204ENST00000612303 DIP2CQ9Y2E4 1556 aa19.44■□□□□ 0.7
NEAT1-204ENST00000612303 IQGAP3Q86VI3 1631 aa19.43■□□□□ 0.7
NEAT1-204ENST00000612303 COL17A1Q9UMD9 1497 aaPredicted RBP19.43■□□□□ 0.7
NEAT1-204ENST00000612303 BCORL1Q5H9F3 1711 aa19.43■□□□□ 0.7
NEAT1-204ENST00000612303 TIMELESSQ9UNS1 1208 aa19.43■□□□□ 0.7
NEAT1-204ENST00000612303 FAM135AQ9P2D6 1515 aa19.41■□□□□ 0.7
NEAT1-204ENST00000612303 KIF3BO15066 747 aa19.41■□□□□ 0.7
NEAT1-204ENST00000612303 ANKRD30BQ9BXX2 1392 aa19.4■□□□□ 0.7
NEAT1-204ENST00000612303 PKD2Q13563 968 aa19.39■□□□□ 0.69
NEAT1-204ENST00000612303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.39■□□□□ 0.69
NEAT1-204ENST00000612303 KANK1Q14678 1352 aa19.39■□□□□ 0.69
NEAT1-204ENST00000612303 YEATS2Q9ULM3 1422 aa19.39■□□□□ 0.69
NEAT1-204ENST00000612303 ATP10AO60312 1499 aa19.39■□□□□ 0.69
NEAT1-204ENST00000612303 REREQ9P2R6 1566 aa19.39■□□□□ 0.69
NEAT1-204ENST00000612303 RNF17Q9BXT8 1623 aaKnown RBP19.39■□□□□ 0.69
NEAT1-204ENST00000612303 VWDEQ8N2E2 1590 aa19.37■□□□□ 0.69
NEAT1-204ENST00000612303 SIN3AQ96ST3 1273 aa19.37■□□□□ 0.69
NEAT1-204ENST00000612303 PRDM15P57071 1507 aaPredicted RBP19.36■□□□□ 0.69
NEAT1-204ENST00000612303 MROH1Q8NDA8 1641 aa19.35■□□□□ 0.69
NEAT1-204ENST00000612303 NEUROD1Q13562 356 aa19.33■□□□□ 0.68
NEAT1-204ENST00000612303 FOXD1Q16676 465 aa19.33■□□□□ 0.68
NEAT1-204ENST00000612303 AGLP35573 1532 aa19.33■□□□□ 0.68
NEAT1-204ENST00000612303 ARHGEF40Q8TER5 1519 aa19.32■□□□□ 0.68
NEAT1-204ENST00000612303 TET3O43151 1660 aa19.32■□□□□ 0.68
NEAT1-204ENST00000612303 LMTK2Q8IWU2 1503 aa19.3■□□□□ 0.68
NEAT1-204ENST00000612303 PPP6R1Q9UPN7 881 aa19.29■□□□□ 0.68
NEAT1-204ENST00000612303 RPRD2Q5VT52 1461 aaKnown RBP19.28■□□□□ 0.68
NEAT1-204ENST00000612303 GGT6Q6P531 493 aa19.26■□□□□ 0.67
NEAT1-204ENST00000612303 TONSLQ96HA7 1378 aa19.26■□□□□ 0.67
NEAT1-204ENST00000612303 E9PCH4 1651 aa19.25■□□□□ 0.67
NEAT1-204ENST00000612303 ZC3H13Q5T200 1668 aaKnown RBP19.24■□□□□ 0.67
NEAT1-204ENST00000612303 CEP152O94986 1710 aa19.23■□□□□ 0.67
NEAT1-204ENST00000612303 EFCAB6Q5THR3 1501 aa19.23■□□□□ 0.67
NEAT1-204ENST00000612303 WASHC2CQ9Y4E1 1318 aa19.23■□□□□ 0.67
NEAT1-204ENST00000612303 PLA2R1Q13018 1463 aa19.22■□□□□ 0.67
NEAT1-204ENST00000612303 PPP1R15AO75807 674 aaPredicted RBP19.22■□□□□ 0.67
NEAT1-204ENST00000612303 PTPRTO14522 1441 aa19.22■□□□□ 0.67
NEAT1-204ENST00000612303 ABCC3O15438 1527 aa19.21■□□□□ 0.67
NEAT1-204ENST00000612303 CCDC144AA2RUR9 1427 aa19.19■□□□□ 0.66
NEAT1-204ENST00000612303 SPHKAPQ2M3C7 1700 aa19.19■□□□□ 0.66
NEAT1-204ENST00000612303 ARHGAP31Q2M1Z3 1444 aa19.18■□□□□ 0.66
NEAT1-204ENST00000612303 SIGLEC1Q9BZZ2 1709 aa19.17■□□□□ 0.66
NEAT1-204ENST00000612303 TRPM2O94759 1503 aa19.17■□□□□ 0.66
NEAT1-204ENST00000612303 CAMSAP1Q5T5Y3 1602 aa19.17■□□□□ 0.66
NEAT1-204ENST00000612303 L3MBTL2Q969R5 705 aa19.15■□□□□ 0.66
NEAT1-204ENST00000612303 NPATQ14207 1427 aa19.13■□□□□ 0.65
NEAT1-204ENST00000612303 CNTLNQ9NXG0 1405 aa19.11■□□□□ 0.65
NEAT1-204ENST00000612303 CFAP65Q6ZU64 1925 aaKnown RBP19.1■□□□□ 0.65
NEAT1-204ENST00000612303 NOS1P29475 1434 aa19.09■□□□□ 0.65
NEAT1-204ENST00000612303 ARID4BQ4LE39 1312 aaPredicted RBP19.09■□□□□ 0.65
NEAT1-204ENST00000612303 NEURL4Q96JN8 1562 aa19.09■□□□□ 0.65
NEAT1-204ENST00000612303 CLTCL1P53675 1640 aa19.07■□□□□ 0.64
NEAT1-204ENST00000612303 CLTCQ00610 1675 aaKnown RBP19.07■□□□□ 0.64
NEAT1-204ENST00000612303 MLECQ14165 292 aa19.06■□□□□ 0.64
NEAT1-204ENST00000612303 STAC3Q96MF2 364 aa19.06■□□□□ 0.64
NEAT1-204ENST00000612303 ESF1Q9H501 851 aaKnown RBP19.06■□□□□ 0.64
NEAT1-204ENST00000612303 SPATA31E1Q6ZUB1 1445 aa19.06■□□□□ 0.64
NEAT1-204ENST00000612303 KIF1BO60333 1816 aa19.04■□□□□ 0.64
NEAT1-204ENST00000612303 UHRF1BP1Q6BDS2 1440 aa19.03■□□□□ 0.64
NEAT1-204ENST00000612303 PREX1Q8TCU6 1659 aa19.03■□□□□ 0.64
NEAT1-204ENST00000612303 SLC52A1Q9NWF4 448 aa19.02■□□□□ 0.64
NEAT1-204ENST00000612303 MROH2AA6NES4 1674 aa19.01■□□□□ 0.63
NEAT1-204ENST00000612303 PIK3C2BO00750 1634 aa19.01■□□□□ 0.63
NEAT1-204ENST00000612303 ZNF316A6NFI3 1004 aaPredicted RBP19■□□□□ 0.63
NEAT1-204ENST00000612303 RGL3Q3MIN7 710 aa19■□□□□ 0.63
NEAT1-204ENST00000612303 DCAF11Q8TEB1 546 aa19■□□□□ 0.63
NEAT1-204ENST00000612303 ZMYM3Q14202 1370 aa19■□□□□ 0.63
NEAT1-204ENST00000612303 SYNMO15061 1565 aa19■□□□□ 0.63
NEAT1-204ENST00000612303 ERVK-7P63135 1459 aa18.99■□□□□ 0.63
NEAT1-204ENST00000612303 NBPF8Q3BBV2 869 aa18.99■□□□□ 0.63
NEAT1-204ENST00000612303 SPATA31D1Q6ZQQ2 1576 aa18.98■□□□□ 0.63
NEAT1-204ENST00000612303 UGGT1Q9NYU2 1555 aa18.98■□□□□ 0.63
NEAT1-204ENST00000612303 ADGRB3O60242 1522 aa18.95■□□□□ 0.62
NEAT1-204ENST00000612303 FBXO31Q5XUX0 539 aaPredicted RBP18.95■□□□□ 0.62
NEAT1-204ENST00000612303 KDM2AQ9Y2K7 1162 aa18.95■□□□□ 0.62
NEAT1-204ENST00000612303 RPGRIP1LQ68CZ1 1315 aa18.95■□□□□ 0.62
NEAT1-204ENST00000612303 IDI1Q13907 227 aa18.94■□□□□ 0.62
NEAT1-204ENST00000612303 FER1L4A9Z1Z3 1794 aa18.93■□□□□ 0.62
NEAT1-204ENST00000612303 PRAG1Q86YV5 1406 aa18.92■□□□□ 0.62
NEAT1-204ENST00000612303 RALGAPBQ86X10 1494 aa18.9■□□□□ 0.62
NEAT1-204ENST00000612303 IFT172Q9UG01 1749 aa18.9■□□□□ 0.62
NEAT1-204ENST00000612303 CHGAP10645 457 aaKnown RBP18.89■□□□□ 0.61
NEAT1-204ENST00000612303 MYOM2P54296 1465 aa18.89■□□□□ 0.61
NEAT1-204ENST00000612303 TMEM131LA2VDJ0 1609 aa18.89■□□□□ 0.61
NEAT1-204ENST00000612303 ZNF326Q5BKZ1 582 aaKnown RBP18.88■□□□□ 0.61
NEAT1-204ENST00000612303 ADAMTSL3P82987 1691 aa18.88■□□□□ 0.61
NEAT1-204ENST00000612303 PPLO60437 1756 aa18.87■□□□□ 0.61
NEAT1-204ENST00000612303 C3P01024 1663 aa18.87■□□□□ 0.61
NEAT1-204ENST00000612303 TRPM1Q7Z4N2 1603 aa18.87■□□□□ 0.61
NEAT1-204ENST00000612303 TNRQ92752 1358 aa18.87■□□□□ 0.61
NEAT1-204ENST00000612303 EIF4G2P78344 907 aaKnown RBP eCLIP18.86■□□□□ 0.61
NEAT1-204ENST00000612303 MADDQ8WXG6 1647 aa18.85■□□□□ 0.61
NEAT1-204ENST00000612303 KIAA1210Q9ULL0 1709 aa18.84■□□□□ 0.61
NEAT1-204ENST00000612303 KDM5AP29375 1690 aaKnown RBP18.84■□□□□ 0.61
NEAT1-204ENST00000612303 NRXN1Q9ULB1 1477 aa18.84■□□□□ 0.61
NEAT1-204ENST00000612303 MYO5BQ9ULV0 1848 aa18.84■□□□□ 0.61
NEAT1-204ENST00000612303 ZFYVE9O95405 1425 aa18.83■□□□□ 0.61
NEAT1-204ENST00000612303 GPRASP1Q5JY77 1395 aa18.83■□□□□ 0.61
NEAT1-204ENST00000612303 VGFO15240 615 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms