RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 ARHGEF12Q9NZN5 1544 aa12.05□□□□□ -0.48
TARDBP-213ENST00000611963 MBD5Q9P267 1494 aa12.04□□□□□ -0.48
TARDBP-213ENST00000611963 KDM5CP41229 1560 aa12.04□□□□□ -0.48
TARDBP-213ENST00000611963 ZNF518AQ6AHZ1 1483 aa12.03□□□□□ -0.48
TARDBP-213ENST00000611963 CCDC141Q6ZP82 1450 aa12.03□□□□□ -0.48
TARDBP-213ENST00000611963 PLEKHH2Q8IVE3 1493 aa12.03□□□□□ -0.48
TARDBP-213ENST00000611963 AFAP1Q8N556 730 aa12.03□□□□□ -0.48
TARDBP-213ENST00000611963 C9orf84Q5VXU9 1444 aa12.03□□□□□ -0.48
TARDBP-213ENST00000611963 TRAPPC8Q9Y2L5 1435 aa12.03□□□□□ -0.48
TARDBP-213ENST00000611963 SHANK2Q9UPX8 1470 aa12.02□□□□□ -0.48
TARDBP-213ENST00000611963 ARID4BQ4LE39 1312 aaPredicted RBP12.02□□□□□ -0.49
TARDBP-213ENST00000611963 ROCK1Q13464 1354 aa12.02□□□□□ -0.49
TARDBP-213ENST00000611963 KIAA1107Q9UPP5 1409 aa12.02□□□□□ -0.49
TARDBP-213ENST00000611963 ADGRL2O95490 1459 aa12.02□□□□□ -0.49
TARDBP-213ENST00000611963 PTPRMP28827 1452 aa12.02□□□□□ -0.49
TARDBP-213ENST00000611963 MADDQ8WXG6 1647 aa12.01□□□□□ -0.49
TARDBP-213ENST00000611963 DHX57Q6P158 1386 aaKnown RBP12.01□□□□□ -0.49
TARDBP-213ENST00000611963 ATP10AO60312 1499 aa12□□□□□ -0.49
TARDBP-213ENST00000611963 NCOA1Q15788 1441 aa11.99□□□□□ -0.49
TARDBP-213ENST00000611963 MLH3Q9UHC1 1453 aa11.99□□□□□ -0.49
TARDBP-213ENST00000611963 HECW2Q9P2P5 1572 aa11.99□□□□□ -0.49
TARDBP-213ENST00000611963 MAST1Q9Y2H9 1570 aa11.99□□□□□ -0.49
TARDBP-213ENST00000611963 DIP2CQ9Y2E4 1556 aa11.98□□□□□ -0.49
TARDBP-213ENST00000611963 ANKRD30AQ9BXX3 1397 aa11.98□□□□□ -0.49
TARDBP-213ENST00000611963 ABCA6Q8N139 1617 aa11.97□□□□□ -0.49
TARDBP-213ENST00000611963 TSPY4P0CV99 314 aa11.97□□□□□ -0.49
TARDBP-213ENST00000611963 TSPY10P0CW01 314 aa11.97□□□□□ -0.49
TARDBP-213ENST00000611963 RIMS1Q86UR5 1692 aaKnown RBP11.96□□□□□ -0.5
TARDBP-213ENST00000611963 KIDINS220Q9ULH0 1771 aa11.95□□□□□ -0.5
TARDBP-213ENST00000611963 RSPH4AQ5TD94 716 aa11.95□□□□□ -0.5
TARDBP-213ENST00000611963 PLXNC1O60486 1568 aa11.95□□□□□ -0.5
TARDBP-213ENST00000611963 REREQ9P2R6 1566 aa11.95□□□□□ -0.5
TARDBP-213ENST00000611963 KIF15Q9NS87 1388 aa11.94□□□□□ -0.5
TARDBP-213ENST00000611963 ZEB1P37275 1124 aaPredicted RBP11.94□□□□□ -0.5
TARDBP-213ENST00000611963 MLECQ14165 292 aa11.94□□□□□ -0.5
TARDBP-213ENST00000611963 INO80Q9ULG1 1556 aaPredicted RBP11.92□□□□□ -0.5
TARDBP-213ENST00000611963 TRIM52Q96A61 297 aa11.92□□□□□ -0.5
TARDBP-213ENST00000611963 ANKRD50Q9ULJ7 1429 aa11.92□□□□□ -0.5
TARDBP-213ENST00000611963 FER1L4A9Z1Z3 1794 aa11.92□□□□□ -0.5
TARDBP-213ENST00000611963 AGLP35573 1532 aa11.91□□□□□ -0.5
TARDBP-213ENST00000611963 SPAG9O60271 1321 aaKnown RBP11.91□□□□□ -0.5
TARDBP-213ENST00000611963 MYT1LQ9UL68 1186 aa11.91□□□□□ -0.5
TARDBP-213ENST00000611963 ATP7AQ04656 1500 aa11.91□□□□□ -0.5
TARDBP-213ENST00000611963 LMTK3Q96Q04 1460 aa11.89□□□□□ -0.51
TARDBP-213ENST00000611963 DUOX2Q9NRD8 1548 aa11.89□□□□□ -0.51
TARDBP-213ENST00000611963 RTEL1-TNFRSF6BF6WH68 1400 aa11.88□□□□□ -0.51
TARDBP-213ENST00000611963 CLSPNQ9HAW4 1339 aa11.87□□□□□ -0.51
TARDBP-213ENST00000611963 PZPP20742 1482 aa11.87□□□□□ -0.51
TARDBP-213ENST00000611963 CEBPAP49715 358 aaPredicted RBP11.86□□□□□ -0.51
TARDBP-213ENST00000611963 UNC13BO14795 1591 aa11.84□□□□□ -0.51
TARDBP-213ENST00000611963 A2MP01023 1474 aa11.84□□□□□ -0.51
TARDBP-213ENST00000611963 MPHOSPH9Q99550 1183 aa11.84□□□□□ -0.51
TARDBP-213ENST00000611963 KDM5DQ9BY66 1539 aa11.84□□□□□ -0.51
TARDBP-213ENST00000611963 ERBINQ96RT1 1412 aa11.84□□□□□ -0.51
TARDBP-213ENST00000611963 SIN3AQ96ST3 1273 aa11.83□□□□□ -0.52
TARDBP-213ENST00000611963 NUP155O75694 1391 aa11.82□□□□□ -0.52
TARDBP-213ENST00000611963 C3P01024 1663 aa11.82□□□□□ -0.52
TARDBP-213ENST00000611963 HSPA2P54652 639 aa11.82□□□□□ -0.52
TARDBP-213ENST00000611963 ACIN1Q9UKV3 1341 aaKnown RBP11.82□□□□□ -0.52
TARDBP-213ENST00000611963 IQGAP3Q86VI3 1631 aa11.8□□□□□ -0.52
TARDBP-213ENST00000611963 EIF2AK4Q9P2K8 1649 aaKnown RBP11.8□□□□□ -0.52
TARDBP-213ENST00000611963 NEUROD1Q13562 356 aa11.8□□□□□ -0.52
TARDBP-213ENST00000611963 FAM135AQ9P2D6 1515 aa11.8□□□□□ -0.52
TARDBP-213ENST00000611963 DEPDC5O75140 1603 aa11.79□□□□□ -0.52
TARDBP-213ENST00000611963 CNTLNQ9NXG0 1405 aa11.79□□□□□ -0.52
TARDBP-213ENST00000611963 DHX29Q7Z478 1369 aaKnown RBP11.79□□□□□ -0.52
TARDBP-213ENST00000611963 PREX1Q8TCU6 1659 aa11.78□□□□□ -0.52
TARDBP-213ENST00000611963 MKRN4PQ13434 485 aaPredicted RBP11.77□□□□□ -0.53
TARDBP-213ENST00000611963 PKD2Q13563 968 aa11.77□□□□□ -0.53
TARDBP-213ENST00000611963 MROH1Q8NDA8 1641 aa11.77□□□□□ -0.53
TARDBP-213ENST00000611963 MROH2AA6NES4 1674 aa11.77□□□□□ -0.53
TARDBP-213ENST00000611963 ZMYM3Q14202 1370 aa11.77□□□□□ -0.53
TARDBP-213ENST00000611963 RNF17Q9BXT8 1623 aaKnown RBP11.76□□□□□ -0.53
TARDBP-213ENST00000611963 KIF3BO15066 747 aa11.76□□□□□ -0.53
TARDBP-213ENST00000611963 GGT6Q6P531 493 aa11.76□□□□□ -0.53
TARDBP-213ENST00000611963 ESF1Q9H501 851 aaKnown RBP11.76□□□□□ -0.53
TARDBP-213ENST00000611963 ANKRD30BQ9BXX2 1392 aa11.76□□□□□ -0.53
TARDBP-213ENST00000611963 CLTCQ00610 1675 aaKnown RBP11.75□□□□□ -0.53
TARDBP-213ENST00000611963 CEP152O94986 1710 aa11.75□□□□□ -0.53
TARDBP-213ENST00000611963 UHRF1BP1Q6BDS2 1440 aa11.75□□□□□ -0.53
TARDBP-213ENST00000611963 SETD1BQ9UPS6 1966 aaKnown RBP11.74□□□□□ -0.53
TARDBP-213ENST00000611963 NPATQ14207 1427 aa11.74□□□□□ -0.53
TARDBP-213ENST00000611963 PRDM15P57071 1507 aaPredicted RBP11.74□□□□□ -0.53
TARDBP-213ENST00000611963 CFAP65Q6ZU64 1925 aaKnown RBP11.74□□□□□ -0.53
TARDBP-213ENST00000611963 VWDEQ8N2E2 1590 aa11.73□□□□□ -0.53
TARDBP-213ENST00000611963 E9PCH4 1651 aa11.72□□□□□ -0.53
TARDBP-213ENST00000611963 TET3O43151 1660 aa11.72□□□□□ -0.53
TARDBP-213ENST00000611963 ILDR1Q86SU0 546 aaPredicted RBP11.71□□□□□ -0.53
TARDBP-213ENST00000611963 STRCQ7RTU9 1775 aa11.71□□□□□ -0.54
TARDBP-213ENST00000611963 KANK1Q14678 1352 aa11.7□□□□□ -0.54
TARDBP-213ENST00000611963 TONSLQ96HA7 1378 aa11.7□□□□□ -0.54
TARDBP-213ENST00000611963 RPRD2Q5VT52 1461 aaKnown RBP11.7□□□□□ -0.54
TARDBP-213ENST00000611963 ZBTB12Q9Y330 459 aaPredicted RBP11.69□□□□□ -0.54
TARDBP-213ENST00000611963 SPHKAPQ2M3C7 1700 aa11.69□□□□□ -0.54
TARDBP-213ENST00000611963 PLA2R1Q13018 1463 aa11.68□□□□□ -0.54
TARDBP-213ENST00000611963 MYO3AQ8NEV4 1616 aa11.68□□□□□ -0.54
TARDBP-213ENST00000611963 EFCAB6Q5THR3 1501 aa11.67□□□□□ -0.54
TARDBP-213ENST00000611963 ABCC3O15438 1527 aa11.66□□□□□ -0.54
TARDBP-213ENST00000611963 LMTK2Q8IWU2 1503 aa11.66□□□□□ -0.54
TARDBP-213ENST00000611963 FBXO31Q5XUX0 539 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms