RNA–Protein interactions for RNA: ENST00000611278.4

ZNF248-208, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-208ENST00000611278 ADGBQ8N7X0 1667 aa12.79□□□□□ -0.36
ZNF248-208ENST00000611278 CPS1P31327 1500 aa12.78□□□□□ -0.36
ZNF248-208ENST00000611278 INO80Q9ULG1 1556 aaPredicted RBP12.78□□□□□ -0.36
ZNF248-208ENST00000611278 A2ML1A8K2U0 1454 aa12.78□□□□□ -0.36
ZNF248-208ENST00000611278 CLTCQ00610 1675 aaKnown RBP12.78□□□□□ -0.36
ZNF248-208ENST00000611278 GPATCH8Q9UKJ3 1502 aaKnown RBP12.78□□□□□ -0.36
ZNF248-208ENST00000611278 FAM50AQ14320 339 aaKnown RBP12.78□□□□□ -0.36
ZNF248-208ENST00000611278 THEMISQ8N1K5 641 aaPredicted RBP12.77□□□□□ -0.36
ZNF248-208ENST00000611278 TOM1O60784 492 aa12.77□□□□□ -0.36
ZNF248-208ENST00000611278 KIF3BO15066 747 aa12.77□□□□□ -0.37
ZNF248-208ENST00000611278 ZNF335Q9H4Z2 1342 aaPredicted RBP12.76□□□□□ -0.37
ZNF248-208ENST00000611278 RTEL1-TNFRSF6BF6WH68 1400 aa12.76□□□□□ -0.37
ZNF248-208ENST00000611278 FOXD1Q16676 465 aa12.75□□□□□ -0.37
ZNF248-208ENST00000611278 HRCP23327 699 aa12.74□□□□□ -0.37
ZNF248-208ENST00000611278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.74□□□□□ -0.37
ZNF248-208ENST00000611278 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
ZNF248-208ENST00000611278 HNRNPMP52272 730 aaKnown RBP eCLIP12.74□□□□□ -0.37
ZNF248-208ENST00000611278 ANKLE2Q86XL3 938 aa12.73□□□□□ -0.37
ZNF248-208ENST00000611278 TNRQ92752 1358 aa12.72□□□□□ -0.37
ZNF248-208ENST00000611278 POLR1AO95602 1720 aaPredicted RBP12.71□□□□□ -0.38
ZNF248-208ENST00000611278 DHX29Q7Z478 1369 aaKnown RBP12.71□□□□□ -0.38
ZNF248-208ENST00000611278 DNMT1P26358 1616 aaKnown RBP12.7□□□□□ -0.38
ZNF248-208ENST00000611278 NLRP1Q9C000 1473 aa12.7□□□□□ -0.38
ZNF248-208ENST00000611278 SHANK2Q9UPX8 1470 aa12.69□□□□□ -0.38
ZNF248-208ENST00000611278 MYT1Q01538 1121 aa12.69□□□□□ -0.38
ZNF248-208ENST00000611278 EHBP1L1Q8N3D4 1523 aa12.69□□□□□ -0.38
ZNF248-208ENST00000611278 PZPP20742 1482 aa12.69□□□□□ -0.38
ZNF248-208ENST00000611278 MED1Q15648 1581 aaPredicted RBP12.68□□□□□ -0.38
ZNF248-208ENST00000611278 KDM5DQ9BY66 1539 aa12.68□□□□□ -0.38
ZNF248-208ENST00000611278 CEP162Q5TB80 1403 aa12.66□□□□□ -0.38
ZNF248-208ENST00000611278 DEPDC5O75140 1603 aa12.66□□□□□ -0.38
ZNF248-208ENST00000611278 HSPA1LP34931 641 aa12.65□□□□□ -0.38
ZNF248-208ENST00000611278 CCDC141Q6ZP82 1450 aa12.65□□□□□ -0.38
ZNF248-208ENST00000611278 MED14O60244 1454 aa12.65□□□□□ -0.38
ZNF248-208ENST00000611278 NPHP4O75161 1426 aaPredicted RBP12.64□□□□□ -0.39
ZNF248-208ENST00000611278 MBD5Q9P267 1494 aa12.64□□□□□ -0.39
ZNF248-208ENST00000611278 PIP4K2BP78356 416 aa12.64□□□□□ -0.39
ZNF248-208ENST00000611278 ACIN1Q9UKV3 1341 aaKnown RBP12.63□□□□□ -0.39
ZNF248-208ENST00000611278 MIA2Q96PC5 1412 aa12.63□□□□□ -0.39
ZNF248-208ENST00000611278 TIAM1Q13009 1591 aa12.63□□□□□ -0.39
ZNF248-208ENST00000611278 NEURL4Q96JN8 1562 aa12.63□□□□□ -0.39
ZNF248-208ENST00000611278 ITGAEP38570 1179 aa12.62□□□□□ -0.39
ZNF248-208ENST00000611278 SYNMO15061 1565 aa12.62□□□□□ -0.39
ZNF248-208ENST00000611278 UGGT1Q9NYU2 1555 aa12.62□□□□□ -0.39
ZNF248-208ENST00000611278 VWDEQ8N2E2 1590 aa12.61□□□□□ -0.39
ZNF248-208ENST00000611278 PCGF6Q9BYE7 350 aa12.61□□□□□ -0.39
ZNF248-208ENST00000611278 ZC3H13Q5T200 1668 aaKnown RBP12.6□□□□□ -0.39
ZNF248-208ENST00000611278 TRIM52Q96A61 297 aa12.6□□□□□ -0.39
ZNF248-208ENST00000611278 ARHGEF5Q12774 1597 aa12.59□□□□□ -0.39
ZNF248-208ENST00000611278 RNF17Q9BXT8 1623 aaKnown RBP12.59□□□□□ -0.39
ZNF248-208ENST00000611278 ANKRD30AQ9BXX3 1397 aa12.59□□□□□ -0.39
ZNF248-208ENST00000611278 IQGAP1P46940 1657 aa12.59□□□□□ -0.39
ZNF248-208ENST00000611278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.58□□□□□ -0.4
ZNF248-208ENST00000611278 MEX3CQ5U5Q3 659 aaKnown RBP12.58□□□□□ -0.4
ZNF248-208ENST00000611278 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.58□□□□□ -0.4
ZNF248-208ENST00000611278 ZNF326Q5BKZ1 582 aaKnown RBP12.58□□□□□ -0.4
ZNF248-208ENST00000611278 FBXO31Q5XUX0 539 aaPredicted RBP12.57□□□□□ -0.4
ZNF248-208ENST00000611278 CAMSAP2Q08AD1 1489 aa12.57□□□□□ -0.4
ZNF248-208ENST00000611278 PPARGC1BQ86YN6 1023 aaKnown RBP12.56□□□□□ -0.4
ZNF248-208ENST00000611278 ZNF644Q9H582 1327 aaPredicted RBP12.56□□□□□ -0.4
ZNF248-208ENST00000611278 EIF2AK4Q9P2K8 1649 aaKnown RBP12.56□□□□□ -0.4
ZNF248-208ENST00000611278 SENP3Q9H4L4 574 aaPredicted RBP12.55□□□□□ -0.4
ZNF248-208ENST00000611278 MAST1Q9Y2H9 1570 aa12.54□□□□□ -0.4
ZNF248-208ENST00000611278 CHIC2Q9UKJ5 165 aa12.54□□□□□ -0.4
ZNF248-208ENST00000611278 NCOA2Q15596 1464 aa12.54□□□□□ -0.4
ZNF248-208ENST00000611278 LRRC7Q96NW7 1537 aa12.53□□□□□ -0.4
ZNF248-208ENST00000611278 TXNDC2Q86VQ3 553 aa12.53□□□□□ -0.4
ZNF248-208ENST00000611278 ERVK-7P63135 1459 aa12.52□□□□□ -0.4
ZNF248-208ENST00000611278 HAP1P54257 671 aaPredicted RBP12.52□□□□□ -0.4
ZNF248-208ENST00000611278 ABCC3O15438 1527 aa12.52□□□□□ -0.4
ZNF248-208ENST00000611278 RRP7BPQ9NSQ0 103 aa12.51□□□□□ -0.41
ZNF248-208ENST00000611278 SCAF11Q99590 1463 aaKnown RBP12.51□□□□□ -0.41
ZNF248-208ENST00000611278 PROSER2Q86WR7 435 aaPredicted RBP12.51□□□□□ -0.41
ZNF248-208ENST00000611278 MYOM3Q5VTT5 1437 aa12.51□□□□□ -0.41
ZNF248-208ENST00000611278 ATF3P18847 181 aa12.5□□□□□ -0.41
ZNF248-208ENST00000611278 ALKQ9UM73 1620 aa12.49□□□□□ -0.41
ZNF248-208ENST00000611278 ARHGAP31Q2M1Z3 1444 aa12.49□□□□□ -0.41
ZNF248-208ENST00000611278 SLIT1O75093 1534 aa12.48□□□□□ -0.41
ZNF248-208ENST00000611278 LRRC9Q6ZRR7 1453 aa12.48□□□□□ -0.41
ZNF248-208ENST00000611278 ARHGAP23Q9P227 1491 aa12.48□□□□□ -0.41
ZNF248-208ENST00000611278 FAM135BQ49AJ0 1406 aa12.48□□□□□ -0.41
ZNF248-208ENST00000611278 DUOX2Q9NRD8 1548 aa12.48□□□□□ -0.41
ZNF248-208ENST00000611278 LOC105371045A0A1W2PR82 267 aa12.47□□□□□ -0.41
ZNF248-208ENST00000611278 VPS8Q8N3P4 1428 aa12.47□□□□□ -0.41
ZNF248-208ENST00000611278 UBR1Q8IWV7 1749 aa12.47□□□□□ -0.41
ZNF248-208ENST00000611278 SLC52A1Q9NWF4 448 aa12.47□□□□□ -0.41
ZNF248-208ENST00000611278 KDM5AP29375 1690 aaKnown RBP12.45□□□□□ -0.42
ZNF248-208ENST00000611278 STRCP1A6NGW2 1772 aa12.44□□□□□ -0.42
ZNF248-208ENST00000611278 MAP3K1Q13233 1512 aa12.44□□□□□ -0.42
ZNF248-208ENST00000611278 ERBINQ96RT1 1412 aa12.43□□□□□ -0.42
ZNF248-208ENST00000611278 CEP152O94986 1710 aa12.42□□□□□ -0.42
ZNF248-208ENST00000611278 PRDM15P57071 1507 aaPredicted RBP12.42□□□□□ -0.42
ZNF248-208ENST00000611278 KCNA6P17658 529 aa12.41□□□□□ -0.42
ZNF248-208ENST00000611278 MROH1Q8NDA8 1641 aa12.41□□□□□ -0.42
ZNF248-208ENST00000611278 KIF15Q9NS87 1388 aa12.41□□□□□ -0.42
ZNF248-208ENST00000611278 TMEM2Q9UHN6 1383 aa12.41□□□□□ -0.42
ZNF248-208ENST00000611278 NKTRP30414 1462 aaKnown RBP12.4□□□□□ -0.42
ZNF248-208ENST00000611278 EFCAB6Q5THR3 1501 aa12.39□□□□□ -0.43
ZNF248-208ENST00000611278 MSH6P52701 1360 aa12.39□□□□□ -0.43
ZNF248-208ENST00000611278 LTKP29376 864 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms