RNA–Protein interactions for RNA: ENST00000611163.4

CPEB1-208, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 2 BASIC

Gene CPEB1, Length 1,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-208ENST00000611163 DEPDC5O75140 1603 aa17.06■□□□□ 0.32
CPEB1-208ENST00000611163 CLSPNQ9HAW4 1339 aa17.05■□□□□ 0.32
CPEB1-208ENST00000611163 KIF3BO15066 747 aa17.05■□□□□ 0.32
CPEB1-208ENST00000611163 ARHGEF40Q8TER5 1519 aa17.04■□□□□ 0.32
CPEB1-208ENST00000611163 ATP10AO60312 1499 aa17.04■□□□□ 0.32
CPEB1-208ENST00000611163 MROH1Q8NDA8 1641 aa17.04■□□□□ 0.32
CPEB1-208ENST00000611163 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
CPEB1-208ENST00000611163 FAM135AQ9P2D6 1515 aa17.03■□□□□ 0.32
CPEB1-208ENST00000611163 BCORL1Q5H9F3 1711 aa17.03■□□□□ 0.32
CPEB1-208ENST00000611163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.32
CPEB1-208ENST00000611163 REREQ9P2R6 1566 aa17.02■□□□□ 0.32
CPEB1-208ENST00000611163 IQGAP3Q86VI3 1631 aa17.02■□□□□ 0.32
CPEB1-208ENST00000611163 PRDM15P57071 1507 aaPredicted RBP17.02■□□□□ 0.31
CPEB1-208ENST00000611163 RNF17Q9BXT8 1623 aaKnown RBP17.01■□□□□ 0.31
CPEB1-208ENST00000611163 SIGLEC1Q9BZZ2 1709 aa17.01■□□□□ 0.31
CPEB1-208ENST00000611163 FOXD1Q16676 465 aa17■□□□□ 0.31
CPEB1-208ENST00000611163 VWDEQ8N2E2 1590 aa17■□□□□ 0.31
CPEB1-208ENST00000611163 PKD2Q13563 968 aa16.98■□□□□ 0.31
CPEB1-208ENST00000611163 AGLP35573 1532 aa16.97■□□□□ 0.31
CPEB1-208ENST00000611163 GGT6Q6P531 493 aa16.96■□□□□ 0.3
CPEB1-208ENST00000611163 SIN3AQ96ST3 1273 aa16.96■□□□□ 0.3
CPEB1-208ENST00000611163 ANKRD30BQ9BXX2 1392 aa16.95■□□□□ 0.3
CPEB1-208ENST00000611163 KANK1Q14678 1352 aa16.94■□□□□ 0.3
CPEB1-208ENST00000611163 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
CPEB1-208ENST00000611163 LMTK2Q8IWU2 1503 aa16.92■□□□□ 0.3
CPEB1-208ENST00000611163 TET3O43151 1660 aa16.91■□□□□ 0.3
CPEB1-208ENST00000611163 E9PCH4 1651 aa16.9■□□□□ 0.3
CPEB1-208ENST00000611163 CEP152O94986 1710 aa16.9■□□□□ 0.3
CPEB1-208ENST00000611163 ABCC3O15438 1527 aa16.9■□□□□ 0.3
CPEB1-208ENST00000611163 PLA2R1Q13018 1463 aa16.89■□□□□ 0.29
CPEB1-208ENST00000611163 EFCAB6Q5THR3 1501 aa16.88■□□□□ 0.29
CPEB1-208ENST00000611163 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
CPEB1-208ENST00000611163 NEUROD1Q13562 356 aa16.88■□□□□ 0.29
CPEB1-208ENST00000611163 ZC3H13Q5T200 1668 aaKnown RBP16.85■□□□□ 0.29
CPEB1-208ENST00000611163 MLECQ14165 292 aa16.85■□□□□ 0.29
CPEB1-208ENST00000611163 RPRD2Q5VT52 1461 aaKnown RBP16.85■□□□□ 0.29
CPEB1-208ENST00000611163 NPATQ14207 1427 aa16.85■□□□□ 0.29
CPEB1-208ENST00000611163 CAMSAP1Q5T5Y3 1602 aa16.84■□□□□ 0.29
CPEB1-208ENST00000611163 ARID4BQ4LE39 1312 aaPredicted RBP16.84■□□□□ 0.29
CPEB1-208ENST00000611163 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
CPEB1-208ENST00000611163 PTPRTO14522 1441 aa16.83■□□□□ 0.28
CPEB1-208ENST00000611163 ARHGAP31Q2M1Z3 1444 aa16.81■□□□□ 0.28
CPEB1-208ENST00000611163 SPHKAPQ2M3C7 1700 aa16.8■□□□□ 0.28
CPEB1-208ENST00000611163 TRPM2O94759 1503 aa16.8■□□□□ 0.28
CPEB1-208ENST00000611163 TIMELESSQ9UNS1 1208 aa16.8■□□□□ 0.28
CPEB1-208ENST00000611163 CLTCQ00610 1675 aaKnown RBP16.79■□□□□ 0.28
CPEB1-208ENST00000611163 CCDC144AA2RUR9 1427 aa16.79■□□□□ 0.28
CPEB1-208ENST00000611163 TONSLQ96HA7 1378 aa16.77■□□□□ 0.28
CPEB1-208ENST00000611163 NOS1P29475 1434 aa16.77■□□□□ 0.27
CPEB1-208ENST00000611163 UGGT1Q9NYU2 1555 aa16.76■□□□□ 0.27
CPEB1-208ENST00000611163 CFAP65Q6ZU64 1925 aaKnown RBP16.75■□□□□ 0.27
CPEB1-208ENST00000611163 CLTCL1P53675 1640 aa16.75■□□□□ 0.27
CPEB1-208ENST00000611163 CNTLNQ9NXG0 1405 aa16.74■□□□□ 0.27
CPEB1-208ENST00000611163 L3MBTL2Q969R5 705 aa16.74■□□□□ 0.27
CPEB1-208ENST00000611163 ZMYM3Q14202 1370 aa16.73■□□□□ 0.27
CPEB1-208ENST00000611163 SYNMO15061 1565 aa16.73■□□□□ 0.27
CPEB1-208ENST00000611163 FBXO31Q5XUX0 539 aaPredicted RBP16.72■□□□□ 0.27
CPEB1-208ENST00000611163 PREX1Q8TCU6 1659 aa16.72■□□□□ 0.27
CPEB1-208ENST00000611163 PPP1R15AO75807 674 aaPredicted RBP16.72■□□□□ 0.27
CPEB1-208ENST00000611163 SPATA31E1Q6ZUB1 1445 aa16.71■□□□□ 0.27
CPEB1-208ENST00000611163 ESF1Q9H501 851 aaKnown RBP16.71■□□□□ 0.27
CPEB1-208ENST00000611163 ERVK-7P63135 1459 aa16.71■□□□□ 0.26
CPEB1-208ENST00000611163 MROH2AA6NES4 1674 aa16.7■□□□□ 0.26
CPEB1-208ENST00000611163 FER1L4A9Z1Z3 1794 aa16.69■□□□□ 0.26
CPEB1-208ENST00000611163 PIK3C2BO00750 1634 aa16.69■□□□□ 0.26
CPEB1-208ENST00000611163 SPATA31D1Q6ZQQ2 1576 aa16.69■□□□□ 0.26
CPEB1-208ENST00000611163 MADDQ8WXG6 1647 aa16.67■□□□□ 0.26
CPEB1-208ENST00000611163 RGL3Q3MIN7 710 aa16.66■□□□□ 0.26
CPEB1-208ENST00000611163 PELP1Q8IZL8 1130 aaKnown RBP16.66■□□□□ 0.26
CPEB1-208ENST00000611163 ADAMTSL3P82987 1691 aa16.66■□□□□ 0.26
CPEB1-208ENST00000611163 NEURL4Q96JN8 1562 aa16.65■□□□□ 0.26
CPEB1-208ENST00000611163 IDI1Q13907 227 aa16.65■□□□□ 0.26
CPEB1-208ENST00000611163 CEBPAP49715 358 aaPredicted RBP16.64■□□□□ 0.26
CPEB1-208ENST00000611163 SLC52A1Q9NWF4 448 aa16.64■□□□□ 0.26
CPEB1-208ENST00000611163 C3P01024 1663 aa16.64■□□□□ 0.25
CPEB1-208ENST00000611163 KIF1BO60333 1816 aa16.64■□□□□ 0.25
CPEB1-208ENST00000611163 ADGRB3O60242 1522 aa16.63■□□□□ 0.25
CPEB1-208ENST00000611163 DCAF11Q8TEB1 546 aa16.62■□□□□ 0.25
CPEB1-208ENST00000611163 NBPF8Q3BBV2 869 aa16.62■□□□□ 0.25
CPEB1-208ENST00000611163 RIMS1Q86UR5 1692 aaKnown RBP16.61■□□□□ 0.25
CPEB1-208ENST00000611163 UHRF1BP1Q6BDS2 1440 aa16.59■□□□□ 0.25
CPEB1-208ENST00000611163 KDM2AQ9Y2K7 1162 aa16.59■□□□□ 0.25
CPEB1-208ENST00000611163 TNRQ92752 1358 aa16.59■□□□□ 0.25
CPEB1-208ENST00000611163 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
CPEB1-208ENST00000611163 CHGAP10645 457 aaKnown RBP16.58■□□□□ 0.25
CPEB1-208ENST00000611163 IFT172Q9UG01 1749 aa16.56■□□□□ 0.24
CPEB1-208ENST00000611163 PRAG1Q86YV5 1406 aa16.56■□□□□ 0.24
CPEB1-208ENST00000611163 ZNF326Q5BKZ1 582 aaKnown RBP16.55■□□□□ 0.24
CPEB1-208ENST00000611163 PLPPR3Q6T4P5 718 aa16.55■□□□□ 0.24
CPEB1-208ENST00000611163 MYO5BQ9ULV0 1848 aa16.55■□□□□ 0.24
CPEB1-208ENST00000611163 A2ML1A8K2U0 1454 aa16.54■□□□□ 0.24
CPEB1-208ENST00000611163 MYOM2P54296 1465 aa16.53■□□□□ 0.24
CPEB1-208ENST00000611163 PPLO60437 1756 aa16.53■□□□□ 0.24
CPEB1-208ENST00000611163 STAC3Q96MF2 364 aa16.53■□□□□ 0.24
CPEB1-208ENST00000611163 NEXMIFQ5QGS0 1516 aa16.52■□□□□ 0.24
CPEB1-208ENST00000611163 NLRP1Q9C000 1473 aa16.52■□□□□ 0.24
CPEB1-208ENST00000611163 RPGRIP1LQ68CZ1 1315 aa16.52■□□□□ 0.24
CPEB1-208ENST00000611163 PTPRMP28827 1452 aa16.52■□□□□ 0.23
CPEB1-208ENST00000611163 ADGRF5Q8IZF2 1346 aa16.51■□□□□ 0.23
CPEB1-208ENST00000611163 NRXN1Q9ULB1 1477 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms