RNA–Protein interactions for RNA: ENST00000610974.1

RN7SL539P-201, Transcript of RNA, 7SL, cytoplasmic 539, pseudogene, humanhuman

BASIC

Gene RN7SL539P, Length 291 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL539P-201ENST00000610974 CCDC141Q6ZP82 1450 aa16.29■□□□□ 0.2
RN7SL539P-201ENST00000610974 KIF3BO15066 747 aa16.29■□□□□ 0.2
RN7SL539P-201ENST00000610974 RSPH4AQ5TD94 716 aa16.28■□□□□ 0.2
RN7SL539P-201ENST00000610974 KDM5DQ9BY66 1539 aa16.28■□□□□ 0.2
RN7SL539P-201ENST00000610974 PZPP20742 1482 aa16.28■□□□□ 0.2
RN7SL539P-201ENST00000610974 CAMSAP2Q08AD1 1489 aa16.28■□□□□ 0.2
RN7SL539P-201ENST00000610974 POLR1AO95602 1720 aaPredicted RBP16.28■□□□□ 0.2
RN7SL539P-201ENST00000610974 TNRQ92752 1358 aa16.27■□□□□ 0.2
RN7SL539P-201ENST00000610974 FBXO31Q5XUX0 539 aaPredicted RBP16.27■□□□□ 0.2
RN7SL539P-201ENST00000610974 NCOA2Q15596 1464 aa16.27■□□□□ 0.19
RN7SL539P-201ENST00000610974 WASHC2CQ9Y4E1 1318 aa16.25■□□□□ 0.19
RN7SL539P-201ENST00000610974 NEURL4Q96JN8 1562 aa16.25■□□□□ 0.19
RN7SL539P-201ENST00000610974 ARHGEF5Q12774 1597 aa16.23■□□□□ 0.19
RN7SL539P-201ENST00000610974 CPS1P31327 1500 aa16.23■□□□□ 0.19
RN7SL539P-201ENST00000610974 NLRP1Q9C000 1473 aa16.22■□□□□ 0.19
RN7SL539P-201ENST00000610974 SHANK2Q9UPX8 1470 aa16.22■□□□□ 0.19
RN7SL539P-201ENST00000610974 MIA2Q96PC5 1412 aa16.21■□□□□ 0.19
RN7SL539P-201ENST00000610974 ANKLE2Q86XL3 938 aa16.21■□□□□ 0.19
RN7SL539P-201ENST00000610974 TSPY4P0CV99 314 aa16.2■□□□□ 0.18
RN7SL539P-201ENST00000610974 TSPY10P0CW01 314 aa16.2■□□□□ 0.18
RN7SL539P-201ENST00000610974 THEMISQ8N1K5 641 aaPredicted RBP16.2■□□□□ 0.18
RN7SL539P-201ENST00000610974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.2■□□□□ 0.18
RN7SL539P-201ENST00000610974 UGGT1Q9NYU2 1555 aa16.19■□□□□ 0.18
RN7SL539P-201ENST00000610974 TOM1O60784 492 aa16.18■□□□□ 0.18
RN7SL539P-201ENST00000610974 DEPDC5O75140 1603 aa16.18■□□□□ 0.18
RN7SL539P-201ENST00000610974 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
RN7SL539P-201ENST00000610974 VWDEQ8N2E2 1590 aa16.17■□□□□ 0.18
RN7SL539P-201ENST00000610974 MED14O60244 1454 aa16.17■□□□□ 0.18
RN7SL539P-201ENST00000610974 RNF17Q9BXT8 1623 aaKnown RBP16.17■□□□□ 0.18
RN7SL539P-201ENST00000610974 HSPA1LP34931 641 aa16.17■□□□□ 0.18
RN7SL539P-201ENST00000610974 PIP4K2BP78356 416 aa16.16■□□□□ 0.18
RN7SL539P-201ENST00000610974 NPHP4O75161 1426 aaPredicted RBP16.16■□□□□ 0.18
RN7SL539P-201ENST00000610974 MAST1Q9Y2H9 1570 aa16.16■□□□□ 0.18
RN7SL539P-201ENST00000610974 LRRC9Q6ZRR7 1453 aa16.16■□□□□ 0.18
RN7SL539P-201ENST00000610974 ZC3H13Q5T200 1668 aaKnown RBP16.15■□□□□ 0.18
RN7SL539P-201ENST00000610974 ABCC3O15438 1527 aa16.14■□□□□ 0.18
RN7SL539P-201ENST00000610974 IQGAP1P46940 1657 aa16.14■□□□□ 0.17
RN7SL539P-201ENST00000610974 EIF2AK4Q9P2K8 1649 aaKnown RBP16.13■□□□□ 0.17
RN7SL539P-201ENST00000610974 VPS8Q8N3P4 1428 aa16.12■□□□□ 0.17
RN7SL539P-201ENST00000610974 MED1Q15648 1581 aaPredicted RBP16.12■□□□□ 0.17
RN7SL539P-201ENST00000610974 ERVK-7P63135 1459 aa16.1■□□□□ 0.17
RN7SL539P-201ENST00000610974 MROH1Q8NDA8 1641 aa16.1■□□□□ 0.17
RN7SL539P-201ENST00000610974 ALKQ9UM73 1620 aa16.1■□□□□ 0.17
RN7SL539P-201ENST00000610974 MAP3K1Q13233 1512 aa16.09■□□□□ 0.17
RN7SL539P-201ENST00000610974 STRCP1A6NGW2 1772 aa16.08■□□□□ 0.17
RN7SL539P-201ENST00000610974 CEP152O94986 1710 aa16.08■□□□□ 0.16
RN7SL539P-201ENST00000610974 KANK4Q5T7N3 995 aaPredicted RBP16.07■□□□□ 0.16
RN7SL539P-201ENST00000610974 MYOM3Q5VTT5 1437 aa16.07■□□□□ 0.16
RN7SL539P-201ENST00000610974 LRRC7Q96NW7 1537 aa16.07■□□□□ 0.16
RN7SL539P-201ENST00000610974 DUOX2Q9NRD8 1548 aa16.07■□□□□ 0.16
RN7SL539P-201ENST00000610974 UBR1Q8IWV7 1749 aa16.07■□□□□ 0.16
RN7SL539P-201ENST00000610974 SYNMO15061 1565 aa16.06■□□□□ 0.16
RN7SL539P-201ENST00000610974 CFAP65Q6ZU64 1925 aaKnown RBP16.06■□□□□ 0.16
RN7SL539P-201ENST00000610974 SCAF11Q99590 1463 aaKnown RBP16.03■□□□□ 0.16
RN7SL539P-201ENST00000610974 ARHGAP31Q2M1Z3 1444 aa16.02■□□□□ 0.16
RN7SL539P-201ENST00000610974 LOC105371045A0A1W2PR82 267 aa16.02■□□□□ 0.16
RN7SL539P-201ENST00000610974 PRDM15P57071 1507 aaPredicted RBP16.02■□□□□ 0.15
RN7SL539P-201ENST00000610974 ARHGAP23Q9P227 1491 aa16.02■□□□□ 0.15
RN7SL539P-201ENST00000610974 SLIT1O75093 1534 aa16.01■□□□□ 0.15
RN7SL539P-201ENST00000610974 ERBINQ96RT1 1412 aa16.01■□□□□ 0.15
RN7SL539P-201ENST00000610974 KIF15Q9NS87 1388 aa16■□□□□ 0.15
RN7SL539P-201ENST00000610974 CROCC2H7BZ55 1655 aa16■□□□□ 0.15
RN7SL539P-201ENST00000610974 LTKP29376 864 aa16■□□□□ 0.15
RN7SL539P-201ENST00000610974 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
RN7SL539P-201ENST00000610974 PHF23Q9BUL5 403 aaPredicted RBP15.99■□□□□ 0.15
RN7SL539P-201ENST00000610974 ABCC5O15440 1437 aa15.99■□□□□ 0.15
RN7SL539P-201ENST00000610974 RRP7BPQ9NSQ0 103 aa15.98■□□□□ 0.15
RN7SL539P-201ENST00000610974 EID1Q9Y6B2 187 aa15.97■□□□□ 0.15
RN7SL539P-201ENST00000610974 PTPN23Q9H3S7 1636 aa15.97■□□□□ 0.15
RN7SL539P-201ENST00000610974 SENP3Q9H4L4 574 aaPredicted RBP15.96■□□□□ 0.15
RN7SL539P-201ENST00000610974 PIK3C2BO00750 1634 aa15.96■□□□□ 0.15
RN7SL539P-201ENST00000610974 XIRP1Q702N8 1843 aaKnown RBP15.96■□□□□ 0.14
RN7SL539P-201ENST00000610974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.95■□□□□ 0.14
RN7SL539P-201ENST00000610974 DAPK1P53355 1430 aa15.94■□□□□ 0.14
RN7SL539P-201ENST00000610974 KANK1Q14678 1352 aa15.94■□□□□ 0.14
RN7SL539P-201ENST00000610974 TMEM2Q9UHN6 1383 aa15.94■□□□□ 0.14
RN7SL539P-201ENST00000610974 KDM5AP29375 1690 aaKnown RBP15.94■□□□□ 0.14
RN7SL539P-201ENST00000610974 STAG3Q9UJ98 1225 aa15.92■□□□□ 0.14
RN7SL539P-201ENST00000610974 EFCAB6Q5THR3 1501 aa15.91■□□□□ 0.14
RN7SL539P-201ENST00000610974 LMTK2Q8IWU2 1503 aa15.91■□□□□ 0.14
RN7SL539P-201ENST00000610974 APLP2Q06481 763 aa15.91■□□□□ 0.14
RN7SL539P-201ENST00000610974 IDI1Q13907 227 aa15.9■□□□□ 0.14
RN7SL539P-201ENST00000610974 FGD6Q6ZV73 1430 aa15.9■□□□□ 0.14
RN7SL539P-201ENST00000610974 ANKRD30AQ9BXX3 1397 aa15.89■□□□□ 0.13
RN7SL539P-201ENST00000610974 FAM135BQ49AJ0 1406 aa15.88■□□□□ 0.13
RN7SL539P-201ENST00000610974 TET3O43151 1660 aa15.88■□□□□ 0.13
RN7SL539P-201ENST00000610974 TMEM94Q12767 1356 aa15.87■□□□□ 0.13
RN7SL539P-201ENST00000610974 KCNA6P17658 529 aa15.87■□□□□ 0.13
RN7SL539P-201ENST00000610974 CHIC2Q9UKJ5 165 aa15.87■□□□□ 0.13
RN7SL539P-201ENST00000610974 NOS1P29475 1434 aa15.86■□□□□ 0.13
RN7SL539P-201ENST00000610974 RGS17Q9UGC6 210 aaPredicted RBP15.86■□□□□ 0.13
RN7SL539P-201ENST00000610974 ADGRB3O60242 1522 aa15.85■□□□□ 0.13
RN7SL539P-201ENST00000610974 SLC26A8Q96RN1 970 aa15.85■□□□□ 0.13
RN7SL539P-201ENST00000610974 SLC52A1Q9NWF4 448 aa15.84■□□□□ 0.13
RN7SL539P-201ENST00000610974 PROSER2Q86WR7 435 aaPredicted RBP15.83■□□□□ 0.12
RN7SL539P-201ENST00000610974 ADGRL2O95490 1459 aa15.83■□□□□ 0.12
RN7SL539P-201ENST00000610974 ROBO1Q9Y6N7 1651 aa15.83■□□□□ 0.12
RN7SL539P-201ENST00000610974 NKTRP30414 1462 aaKnown RBP15.82■□□□□ 0.12
RN7SL539P-201ENST00000610974 NWD1Q149M9 1564 aa15.82■□□□□ 0.12
RN7SL539P-201ENST00000610974 RPRD2Q5VT52 1461 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms