RNA–Protein interactions for RNA: ENST00000610723.4

TPGS2-220, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 3 BASIC

Gene TPGS2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-220ENST00000610723 CROCC2H7BZ55 1655 aa25.45■■□□□ 1.66
TPGS2-220ENST00000610723 CHIC2Q9UKJ5 165 aa25.45■■□□□ 1.66
TPGS2-220ENST00000610723 DNMT1P26358 1616 aaKnown RBP25.44■■□□□ 1.66
TPGS2-220ENST00000610723 PTPRKQ15262 1439 aa25.43■■□□□ 1.66
TPGS2-220ENST00000610723 KIF15Q9NS87 1388 aa25.43■■□□□ 1.66
TPGS2-220ENST00000610723 KDM5DQ9BY66 1539 aa25.43■■□□□ 1.66
TPGS2-220ENST00000610723 DUOX2Q9NRD8 1548 aa25.42■■□□□ 1.66
TPGS2-220ENST00000610723 EIF2AK4Q9P2K8 1649 aaKnown RBP25.39■■□□□ 1.65
TPGS2-220ENST00000610723 FAM135AQ9P2D6 1515 aa25.38■■□□□ 1.65
TPGS2-220ENST00000610723 FBXO31Q5XUX0 539 aaPredicted RBP25.37■■□□□ 1.65
TPGS2-220ENST00000610723 RNF17Q9BXT8 1623 aaKnown RBP25.37■■□□□ 1.65
TPGS2-220ENST00000610723 ANKRD30AQ9BXX3 1397 aa25.36■■□□□ 1.65
TPGS2-220ENST00000610723 ERBINQ96RT1 1412 aa25.34■■□□□ 1.65
TPGS2-220ENST00000610723 PZPP20742 1482 aa25.33■■□□□ 1.65
TPGS2-220ENST00000610723 MYO3AQ8NEV4 1616 aa25.33■■□□□ 1.65
TPGS2-220ENST00000610723 DMRT2Q9Y5R5 561 aa25.32■■□□□ 1.64
TPGS2-220ENST00000610723 STRCQ7RTU9 1775 aa25.32■■□□□ 1.64
TPGS2-220ENST00000610723 ABCC3O15438 1527 aa25.31■■□□□ 1.64
TPGS2-220ENST00000610723 NCOA1Q15788 1441 aa25.31■■□□□ 1.64
TPGS2-220ENST00000610723 TNRQ92752 1358 aa25.3■■□□□ 1.64
TPGS2-220ENST00000610723 ILDR1Q86SU0 546 aaPredicted RBP25.3■■□□□ 1.64
TPGS2-220ENST00000610723 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.3■■□□□ 1.644e-8■□□□□ 8.6
TPGS2-220ENST00000610723 MROH1Q8NDA8 1641 aa25.3■■□□□ 1.64
TPGS2-220ENST00000610723 CAMSAP1Q5T5Y3 1602 aa25.29■■□□□ 1.64
TPGS2-220ENST00000610723 CEP170BQ9Y4F5 1589 aaPredicted RBP25.29■■□□□ 1.64
TPGS2-220ENST00000610723 ZC3H13Q5T200 1668 aaKnown RBP25.27■■□□□ 1.64
TPGS2-220ENST00000610723 ADGRL2O95490 1459 aa25.27■■□□□ 1.64
TPGS2-220ENST00000610723 ZNF142P52746 1687 aaPredicted RBP25.26■■□□□ 1.63
TPGS2-220ENST00000610723 A2ML1A8K2U0 1454 aa25.25■■□□□ 1.63
TPGS2-220ENST00000610723 NCKAP5LQ9HCH0 1330 aa25.24■■□□□ 1.63
TPGS2-220ENST00000610723 CEP152O94986 1710 aa25.24■■□□□ 1.63
TPGS2-220ENST00000610723 PRDM15P57071 1507 aaPredicted RBP25.23■■□□□ 1.63
TPGS2-220ENST00000610723 ITGAEP38570 1179 aa25.23■■□□□ 1.63
TPGS2-220ENST00000610723 KANK1Q14678 1352 aa25.22■■□□□ 1.63
TPGS2-220ENST00000610723 PTPRTO14522 1441 aa25.22■■□□□ 1.63
TPGS2-220ENST00000610723 DEPDC5O75140 1603 aa25.18■■□□□ 1.62
TPGS2-220ENST00000610723 ERVK-7P63135 1459 aa25.17■■□□□ 1.62
TPGS2-220ENST00000610723 PLA2R1Q13018 1463 aa25.17■■□□□ 1.62
TPGS2-220ENST00000610723 ANKRD50Q9ULJ7 1429 aa25.17■■□□□ 1.62
TPGS2-220ENST00000610723 PKD2Q13563 968 aa25.17■■□□□ 1.62
TPGS2-220ENST00000610723 NLRP1Q9C000 1473 aa25.17■■□□□ 1.62
TPGS2-220ENST00000610723 SPATA31D1Q6ZQQ2 1576 aa25.16■■□□□ 1.62
TPGS2-220ENST00000610723 CERKQ8TCT0 537 aa25.15■■□□□ 1.62
TPGS2-220ENST00000610723 FBXO41Q8TF61 875 aa25.14■■□□□ 1.62
TPGS2-220ENST00000610723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.13■■□□□ 1.61
TPGS2-220ENST00000610723 ARHGAP31Q2M1Z3 1444 aa25.13■■□□□ 1.61
TPGS2-220ENST00000610723 THEMISQ8N1K5 641 aaPredicted RBP25.12■■□□□ 1.61
TPGS2-220ENST00000610723 ROCK1Q13464 1354 aa25.12■■□□□ 1.61
TPGS2-220ENST00000610723 UGGT1Q9NYU2 1555 aa25.12■■□□□ 1.61
TPGS2-220ENST00000610723 CFAP65Q6ZU64 1925 aaKnown RBP25.1■■□□□ 1.61
TPGS2-220ENST00000610723 VWDEQ8N2E2 1590 aa25.1■■□□□ 1.61
TPGS2-220ENST00000610723 LMTK2Q8IWU2 1503 aa25.09■■□□□ 1.61
TPGS2-220ENST00000610723 RRBP1Q9P2E9 1410 aaKnown RBP25.07■■□□□ 1.6
TPGS2-220ENST00000610723 ANKLE2Q86XL3 938 aa25.06■■□□□ 1.6
TPGS2-220ENST00000610723 ZNF335Q9H4Z2 1342 aaPredicted RBP25.02■■□□□ 1.6
TPGS2-220ENST00000610723 EFCAB6Q5THR3 1501 aa25.02■■□□□ 1.6
TPGS2-220ENST00000610723 POLR1AO95602 1720 aaPredicted RBP25■■□□□ 1.59
TPGS2-220ENST00000610723 LTBP4Q8N2S1 1624 aa24.99■■□□□ 1.59
TPGS2-220ENST00000610723 STAG3Q9UJ98 1225 aa24.99■■□□□ 1.59
TPGS2-220ENST00000610723 UNC13BO14795 1591 aa24.99■■□□□ 1.59
TPGS2-220ENST00000610723 NEURL4Q96JN8 1562 aa24.99■■□□□ 1.59
TPGS2-220ENST00000610723 UBR1Q8IWV7 1749 aa24.97■■□□□ 1.59
TPGS2-220ENST00000610723 IDI1Q13907 227 aa24.96■■□□□ 1.59
TPGS2-220ENST00000610723 NPHP4O75161 1426 aaPredicted RBP24.95■■□□□ 1.59
TPGS2-220ENST00000610723 NUP155O75694 1391 aa24.95■■□□□ 1.58
TPGS2-220ENST00000610723 NOS1P29475 1434 aa24.95■■□□□ 1.58
TPGS2-220ENST00000610723 PIK3C2BO00750 1634 aa24.94■■□□□ 1.58
TPGS2-220ENST00000610723 TET3O43151 1660 aa24.94■■□□□ 1.58
TPGS2-220ENST00000610723 SYNMO15061 1565 aa24.94■■□□□ 1.58
TPGS2-220ENST00000610723 RPRD2Q5VT52 1461 aaKnown RBP24.93■■□□□ 1.58
TPGS2-220ENST00000610723 MED14O60244 1454 aa24.91■■□□□ 1.58
TPGS2-220ENST00000610723 TXNDC2Q86VQ3 553 aa24.91■■□□□ 1.58
TPGS2-220ENST00000610723 LTKP29376 864 aa24.89■■□□□ 1.58
TPGS2-220ENST00000610723 SLC52A1Q9NWF4 448 aa24.89■■□□□ 1.58
TPGS2-220ENST00000610723 EID1Q9Y6B2 187 aa24.89■■□□□ 1.58
TPGS2-220ENST00000610723 IQGAP3Q86VI3 1631 aa24.89■■□□□ 1.57
TPGS2-220ENST00000610723 GCC2Q8IWJ2 1684 aa24.89■■□□□ 1.57
TPGS2-220ENST00000610723 SCAF11Q99590 1463 aaKnown RBP24.88■■□□□ 1.57
TPGS2-220ENST00000610723 ARHGAP23Q9P227 1491 aa24.87■■□□□ 1.57
TPGS2-220ENST00000610723 SLIT1O75093 1534 aa24.87■■□□□ 1.57
TPGS2-220ENST00000610723 IQGAP1P46940 1657 aa24.87■■□□□ 1.57
TPGS2-220ENST00000610723 TMEM2Q9UHN6 1383 aa24.87■■□□□ 1.57
TPGS2-220ENST00000610723 NAIPQ13075 1403 aa24.86■■□□□ 1.57
TPGS2-220ENST00000610723 E9PCH4 1651 aa24.85■■□□□ 1.57
TPGS2-220ENST00000610723 IQSEC2Q5JU85 1478 aa24.83■■□□□ 1.57
TPGS2-220ENST00000610723 ADGRB3O60242 1522 aa24.83■■□□□ 1.57
TPGS2-220ENST00000610723 KDM5AP29375 1690 aaKnown RBP24.81■■□□□ 1.56
TPGS2-220ENST00000610723 CHGAP10645 457 aaKnown RBP24.81■■□□□ 1.56
TPGS2-220ENST00000610723 HFM1A2PYH4 1435 aa24.79■■□□□ 1.56
TPGS2-220ENST00000610723 CPS1P31327 1500 aa24.78■■□□□ 1.56
TPGS2-220ENST00000610723 TRIM52Q96A61 297 aa24.78■■□□□ 1.56
TPGS2-220ENST00000610723 UBAP1LF5GYI3 381 aa24.76■■□□□ 1.55
TPGS2-220ENST00000610723 BCANQ96GW7 911 aa24.74■■□□□ 1.55
TPGS2-220ENST00000610723 SENP3Q9H4L4 574 aaPredicted RBP24.74■■□□□ 1.55
TPGS2-220ENST00000610723 TMEM131LA2VDJ0 1609 aa24.72■■□□□ 1.55
TPGS2-220ENST00000610723 RIMS2Q9UQ26 1411 aa24.71■■□□□ 1.55
TPGS2-220ENST00000610723 PPP1R15AO75807 674 aaPredicted RBP24.7■■□□□ 1.55
TPGS2-220ENST00000610723 HDGFP51858 240 aaKnown RBP24.7■■□□□ 1.55
TPGS2-220ENST00000610723 SLC26A8Q96RN1 970 aa24.7■■□□□ 1.55
TPGS2-220ENST00000610723 MYO5BQ9ULV0 1848 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms