RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 PDE4AP27815 886 aa22.59■■□□□ 1.21
TNIP1-220ENST00000610535 ADGBQ8N7X0 1667 aa22.58■■□□□ 1.21
TNIP1-220ENST00000610535 TCERG1O14776 1098 aaKnown RBP22.57■■□□□ 1.2
TNIP1-220ENST00000610535 CDCA7LQ96GN5 454 aa22.57■■□□□ 1.2
TNIP1-220ENST00000610535 LAS1LQ9Y4W2 734 aaKnown RBP22.55■■□□□ 1.2
TNIP1-220ENST00000610535 CARMIL2Q6F5E8 1435 aa22.55■■□□□ 1.2
TNIP1-220ENST00000610535 PLIN1O60240 522 aa22.53■■□□□ 1.2
TNIP1-220ENST00000610535 NLRP13Q86W25 1043 aa22.52■■□□□ 1.2
TNIP1-220ENST00000610535 BACH2Q9BYV9 841 aa22.52■■□□□ 1.2
TNIP1-220ENST00000610535 PLEKHD1A6NEE1 506 aa22.52■■□□□ 1.2
TNIP1-220ENST00000610535 SKAP1Q86WV1 359 aa22.52■■□□□ 1.2
TNIP1-220ENST00000610535 KTN1Q86UP2 1357 aaKnown RBP22.52■■□□□ 1.2
TNIP1-220ENST00000610535 ITSN2Q9NZM3 1697 aa22.51■■□□□ 1.19
TNIP1-220ENST00000610535 NUP160Q12769 1436 aa22.51■■□□□ 1.19
TNIP1-220ENST00000610535 CROCC2H7BZ55 1655 aa22.5■■□□□ 1.19
TNIP1-220ENST00000610535 ARHGEF12Q9NZN5 1544 aa22.49■■□□□ 1.19
TNIP1-220ENST00000610535 PDE3BQ13370 1112 aa22.48■■□□□ 1.19
TNIP1-220ENST00000610535 NEFMP07197 916 aa22.47■■□□□ 1.19
TNIP1-220ENST00000610535 C9orf84Q5VXU9 1444 aa22.46■■□□□ 1.19
TNIP1-220ENST00000610535 PER1O15534 1290 aaPredicted RBP22.46■■□□□ 1.19
TNIP1-220ENST00000610535 TSPY4P0CV99 314 aa22.46■■□□□ 1.19
TNIP1-220ENST00000610535 TSPY10P0CW01 314 aa22.46■■□□□ 1.19
TNIP1-220ENST00000610535 PARD3Q8TEW0 1356 aa22.46■■□□□ 1.19
TNIP1-220ENST00000610535 NBPF1Q3BBV0 1214 aa22.46■■□□□ 1.19
TNIP1-220ENST00000610535 CC2D1BQ5T0F9 858 aaKnown RBP22.46■■□□□ 1.19
TNIP1-220ENST00000610535 IL27Q8NEV9 243 aa22.45■■□□□ 1.19
TNIP1-220ENST00000610535 MS4A1P11836 297 aa22.45■■□□□ 1.18
TNIP1-220ENST00000610535 RGL3Q3MIN7 710 aa22.45■■□□□ 1.18
TNIP1-220ENST00000610535 HNRNPMP52272 730 aaKnown RBP eCLIP22.44■■□□□ 1.181e-6■■■■□ 22.9
TNIP1-220ENST00000610535 RTN4Q9NQC3 1192 aaKnown RBP22.44■■□□□ 1.18
TNIP1-220ENST00000610535 E9PCH4 1651 aa22.43■■□□□ 1.18
TNIP1-220ENST00000610535 CRBNQ96SW2 442 aa22.42■■□□□ 1.18
TNIP1-220ENST00000610535 ATP10BO94823 1461 aa22.41■■□□□ 1.18
TNIP1-220ENST00000610535 PTPRGP23470 1445 aa22.41■■□□□ 1.18
TNIP1-220ENST00000610535 ADCY10Q96PN6 1610 aa22.4■■□□□ 1.18
TNIP1-220ENST00000610535 ANO8Q9HCE9 1232 aaPredicted RBP22.39■■□□□ 1.17
TNIP1-220ENST00000610535 CDC42BPAQ5VT25 1732 aa22.37■■□□□ 1.17
TNIP1-220ENST00000610535 C20orf194Q5TEA3 1177 aa22.36■■□□□ 1.17
TNIP1-220ENST00000610535 PANK3Q9H999 370 aa22.36■■□□□ 1.17
TNIP1-220ENST00000610535 KDM5DQ9BY66 1539 aa22.35■■□□□ 1.17
TNIP1-220ENST00000610535 PRAG1Q86YV5 1406 aa22.35■■□□□ 1.17
TNIP1-220ENST00000610535 USP35Q9P2H5 1018 aa22.34■■□□□ 1.17
TNIP1-220ENST00000610535 SHANK2Q9UPX8 1470 aa22.34■■□□□ 1.17
TNIP1-220ENST00000610535 DISP3Q9P2K9 1392 aa22.34■■□□□ 1.17
TNIP1-220ENST00000610535 ABCC10Q5T3U5 1492 aa22.33■■□□□ 1.17
TNIP1-220ENST00000610535 TESK2Q96S53 571 aa22.33■■□□□ 1.16
TNIP1-220ENST00000610535 PPM1GO15355 546 aaPredicted RBP22.31■■□□□ 1.16
TNIP1-220ENST00000610535 ERCC6L2Q5T890 1561 aa22.31■■□□□ 1.16
TNIP1-220ENST00000610535 SLC4A3P48751 1232 aa22.3■■□□□ 1.16
TNIP1-220ENST00000610535 CCDC144AA2RUR9 1427 aa22.3■■□□□ 1.16
TNIP1-220ENST00000610535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.3■■□□□ 1.161e-6■■■□□ 15.7
TNIP1-220ENST00000610535 TRPM1Q7Z4N2 1603 aa22.29■■□□□ 1.16
TNIP1-220ENST00000610535 ABCA8O94911 1581 aa22.29■■□□□ 1.16
TNIP1-220ENST00000610535 ADAMTS8Q9UP79 889 aa22.29■■□□□ 1.16
TNIP1-220ENST00000610535 CHD1O14646 1710 aa22.29■■□□□ 1.16
TNIP1-220ENST00000610535 BLMP54132 1417 aaPredicted RBP22.29■■□□□ 1.16
TNIP1-220ENST00000610535 FAM135AQ9P2D6 1515 aa22.28■■□□□ 1.16
TNIP1-220ENST00000610535 WASHC2CQ9Y4E1 1318 aa22.27■■□□□ 1.16
TNIP1-220ENST00000610535 COL17A1Q9UMD9 1497 aaPredicted RBP22.26■■□□□ 1.15
TNIP1-220ENST00000610535 DDRGK1Q96HY6 314 aa22.25■■□□□ 1.15
TNIP1-220ENST00000610535 PLA2R1Q13018 1463 aa22.24■■□□□ 1.15
TNIP1-220ENST00000610535 GPRASP1Q5JY77 1395 aa22.24■■□□□ 1.15
TNIP1-220ENST00000610535 A2MP01023 1474 aa22.23■■□□□ 1.15
TNIP1-220ENST00000610535 KDM2BQ8NHM5 1336 aa22.22■■□□□ 1.15
TNIP1-220ENST00000610535 ERBINQ96RT1 1412 aa22.22■■□□□ 1.15
TNIP1-220ENST00000610535 TMF1P82094 1093 aa22.22■■□□□ 1.15
TNIP1-220ENST00000610535 PRKCSHP14314 528 aaPredicted RBP22.2■■□□□ 1.14
TNIP1-220ENST00000610535 ZMYM4Q5VZL5 1548 aa22.2■■□□□ 1.14
TNIP1-220ENST00000610535 INSRP06213 1382 aa22.2■■□□□ 1.14
TNIP1-220ENST00000610535 NFKBIBQ15653 356 aa22.19■■□□□ 1.14
TNIP1-220ENST00000610535 PLEKHH1Q9ULM0 1364 aa22.19■■□□□ 1.14
TNIP1-220ENST00000610535 DUSP27Q5VZP5 1158 aa22.19■■□□□ 1.14
TNIP1-220ENST00000610535 ARHGEF5Q12774 1597 aa22.17■■□□□ 1.14
TNIP1-220ENST00000610535 CCDC141Q6ZP82 1450 aa22.17■■□□□ 1.14
TNIP1-220ENST00000610535 PRDM15P57071 1507 aaPredicted RBP22.16■■□□□ 1.14
TNIP1-220ENST00000610535 CENPQQ7L2Z9 268 aaPredicted RBP22.16■■□□□ 1.14
TNIP1-220ENST00000610535 PPP2R1AP30153 589 aa22.15■■□□□ 1.14
TNIP1-220ENST00000610535 GSE1Q14687 1217 aa22.15■■□□□ 1.14
TNIP1-220ENST00000610535 DAXXQ9UER7 740 aaPredicted RBP22.15■■□□□ 1.14
TNIP1-220ENST00000610535 WDR43Q15061 677 aaKnown RBP eCLIP22.15■■□□□ 1.14
TNIP1-220ENST00000610535 BRPF3Q9ULD4 1205 aa22.15■■□□□ 1.14
TNIP1-220ENST00000610535 PLEKHH2Q8IVE3 1493 aa22.14■■□□□ 1.14
TNIP1-220ENST00000610535 C8orf34Q49A92 452 aa22.14■■□□□ 1.13
TNIP1-220ENST00000610535 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.14■■□□□ 1.13
TNIP1-220ENST00000610535 SAMD9LQ8IVG5 1584 aa22.13■■□□□ 1.13
TNIP1-220ENST00000610535 RGS3P49796 1198 aa22.13■■□□□ 1.13
TNIP1-220ENST00000610535 FAM161AQ3B820 660 aa22.13■■□□□ 1.13
TNIP1-220ENST00000610535 KNSTRNQ9Y448 316 aa22.13■■□□□ 1.13
TNIP1-220ENST00000610535 GOLGA2Q08379 1002 aa22.12■■□□□ 1.13
TNIP1-220ENST00000610535 RSPH4AQ5TD94 716 aa22.11■■□□□ 1.13
TNIP1-220ENST00000610535 MAGI2Q86UL8 1455 aa22.11■■□□□ 1.13
TNIP1-220ENST00000610535 ZNF521Q96K83 1311 aa22.09■■□□□ 1.13
TNIP1-220ENST00000610535 FRAT1Q92837 279 aaPredicted RBP22.09■■□□□ 1.13
TNIP1-220ENST00000610535 ARHGAP5Q13017 1502 aa22.09■■□□□ 1.13
TNIP1-220ENST00000610535 CCDC146Q8IYE0 955 aa22.08■■□□□ 1.13
TNIP1-220ENST00000610535 CDC42BPBQ9Y5S2 1711 aa22.08■■□□□ 1.12
TNIP1-220ENST00000610535 AMER1Q5JTC6 1135 aaPredicted RBP22.08■■□□□ 1.12
TNIP1-220ENST00000610535 LAMC1P11047 1609 aa22.07■■□□□ 1.12
TNIP1-220ENST00000610535 WDR7Q9Y4E6 1490 aa22.07■■□□□ 1.12
TNIP1-220ENST00000610535 TTC37Q6PGP7 1564 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms