RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 RNF17Q9BXT8 1623 aaKnown RBP20.09■□□□□ 0.81
SNX20-205ENST00000610485 EIF2AK4Q9P2K8 1649 aaKnown RBP20.09■□□□□ 0.81
SNX20-205ENST00000610485 DAPK1P53355 1430 aa20.09■□□□□ 0.81
SNX20-205ENST00000610485 DNMT1P26358 1616 aaKnown RBP20.09■□□□□ 0.81
SNX20-205ENST00000610485 STRCQ7RTU9 1775 aa20.08■□□□□ 0.81
SNX20-205ENST00000610485 MYO3AQ8NEV4 1616 aa20.08■□□□□ 0.8
SNX20-205ENST00000610485 DUOX2Q9NRD8 1548 aa20.07■□□□□ 0.8
SNX20-205ENST00000610485 PZPP20742 1482 aa20.06■□□□□ 0.8
SNX20-205ENST00000610485 ZNF142P52746 1687 aaPredicted RBP20.06■□□□□ 0.8
SNX20-205ENST00000610485 WASHC2CQ9Y4E1 1318 aa20.05■□□□□ 0.8
SNX20-205ENST00000610485 NCOA1Q15788 1441 aa20.05■□□□□ 0.8
SNX20-205ENST00000610485 DMRT2Q9Y5R5 561 aa20.05■□□□□ 0.8
SNX20-205ENST00000610485 KIF15Q9NS87 1388 aa20.05■□□□□ 0.8
SNX20-205ENST00000610485 MROH1Q8NDA8 1641 aa20.04■□□□□ 0.8
SNX20-205ENST00000610485 CEP170BQ9Y4F5 1589 aaPredicted RBP20.04■□□□□ 0.8
SNX20-205ENST00000610485 PTPRTO14522 1441 aa20.02■□□□□ 0.8
SNX20-205ENST00000610485 ERBINQ96RT1 1412 aa20.02■□□□□ 0.8
SNX20-205ENST00000610485 ABCC3O15438 1527 aa20.02■□□□□ 0.8
SNX20-205ENST00000610485 CAMSAP1Q5T5Y3 1602 aa20.02■□□□□ 0.8
SNX20-205ENST00000610485 ZC3H13Q5T200 1668 aaKnown RBP20.02■□□□□ 0.8
SNX20-205ENST00000610485 A2ML1A8K2U0 1454 aa19.99■□□□□ 0.79
SNX20-205ENST00000610485 PLA2R1Q13018 1463 aa19.99■□□□□ 0.79
SNX20-205ENST00000610485 TNRQ92752 1358 aa19.99■□□□□ 0.79
SNX20-205ENST00000610485 FBXO31Q5XUX0 539 aaPredicted RBP19.99■□□□□ 0.79
SNX20-205ENST00000610485 RRP7BPQ9NSQ0 103 aa19.99■□□□□ 0.79
SNX20-205ENST00000610485 ANKRD30AQ9BXX3 1397 aa19.98■□□□□ 0.79
SNX20-205ENST00000610485 PRDM15P57071 1507 aaPredicted RBP19.98■□□□□ 0.79
SNX20-205ENST00000610485 FBXO41Q8TF61 875 aa19.98■□□□□ 0.79
SNX20-205ENST00000610485 ADGRL2O95490 1459 aa19.97■□□□□ 0.79
SNX20-205ENST00000610485 DEPDC5O75140 1603 aa19.94■□□□□ 0.78
SNX20-205ENST00000610485 FAM50AQ14320 339 aaKnown RBP19.94■□□□□ 0.78
SNX20-205ENST00000610485 CHIC2Q9UKJ5 165 aa19.94■□□□□ 0.78
SNX20-205ENST00000610485 SPATA31D1Q6ZQQ2 1576 aa19.94■□□□□ 0.78
SNX20-205ENST00000610485 NLRP1Q9C000 1473 aa19.93■□□□□ 0.78
SNX20-205ENST00000610485 CERKQ8TCT0 537 aa19.93■□□□□ 0.78
SNX20-205ENST00000610485 PKD2Q13563 968 aa19.92■□□□□ 0.78
SNX20-205ENST00000610485 NCKAP5LQ9HCH0 1330 aa19.92■□□□□ 0.78
SNX20-205ENST00000610485 ERVK-7P63135 1459 aa19.92■□□□□ 0.78
SNX20-205ENST00000610485 CEP152O94986 1710 aa19.91■□□□□ 0.78
SNX20-205ENST00000610485 ARHGAP31Q2M1Z3 1444 aa19.9■□□□□ 0.78
SNX20-205ENST00000610485 VWDEQ8N2E2 1590 aa19.87■□□□□ 0.77
SNX20-205ENST00000610485 LMTK2Q8IWU2 1503 aa19.87■□□□□ 0.77
SNX20-205ENST00000610485 LTBP4Q8N2S1 1624 aa19.87■□□□□ 0.77
SNX20-205ENST00000610485 UGGT1Q9NYU2 1555 aa19.87■□□□□ 0.77
SNX20-205ENST00000610485 KANK1Q14678 1352 aa19.86■□□□□ 0.77
SNX20-205ENST00000610485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.85■□□□□ 0.77
SNX20-205ENST00000610485 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.84■□□□□ 0.77
SNX20-205ENST00000610485 ANKRD50Q9ULJ7 1429 aa19.84■□□□□ 0.77
SNX20-205ENST00000610485 NEURL4Q96JN8 1562 aa19.83■□□□□ 0.77
SNX20-205ENST00000610485 THEMISQ8N1K5 641 aaPredicted RBP19.83■□□□□ 0.77
SNX20-205ENST00000610485 ROCK1Q13464 1354 aa19.83■□□□□ 0.76
SNX20-205ENST00000610485 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
SNX20-205ENST00000610485 POLR1AO95602 1720 aaPredicted RBP19.81■□□□□ 0.76
SNX20-205ENST00000610485 EFCAB6Q5THR3 1501 aa19.79■□□□□ 0.76
SNX20-205ENST00000610485 IQSEC2Q5JU85 1478 aa19.79■□□□□ 0.76
SNX20-205ENST00000610485 ZNF335Q9H4Z2 1342 aaPredicted RBP19.78■□□□□ 0.76
SNX20-205ENST00000610485 ANKLE2Q86XL3 938 aa19.78■□□□□ 0.76
SNX20-205ENST00000610485 MED14O60244 1454 aa19.78■□□□□ 0.76
SNX20-205ENST00000610485 UBR1Q8IWV7 1749 aa19.76■□□□□ 0.75
SNX20-205ENST00000610485 UNC13BO14795 1591 aa19.75■□□□□ 0.75
SNX20-205ENST00000610485 RRBP1Q9P2E9 1410 aaKnown RBP19.75■□□□□ 0.75
SNX20-205ENST00000610485 NPHP4O75161 1426 aaPredicted RBP19.74■□□□□ 0.75
SNX20-205ENST00000610485 NOS1P29475 1434 aa19.74■□□□□ 0.75
SNX20-205ENST00000610485 RPRD2Q5VT52 1461 aaKnown RBP19.73■□□□□ 0.75
SNX20-205ENST00000610485 ARHGAP23Q9P227 1491 aa19.73■□□□□ 0.75
SNX20-205ENST00000610485 SYNMO15061 1565 aa19.72■□□□□ 0.75
SNX20-205ENST00000610485 SLIT1O75093 1534 aa19.71■□□□□ 0.75
SNX20-205ENST00000610485 PIK3C2BO00750 1634 aa19.71■□□□□ 0.75
SNX20-205ENST00000610485 ITGAEP38570 1179 aa19.7■□□□□ 0.74
SNX20-205ENST00000610485 TET3O43151 1660 aa19.7■□□□□ 0.74
SNX20-205ENST00000610485 KDM5AP29375 1690 aaKnown RBP19.69■□□□□ 0.74
SNX20-205ENST00000610485 CFAP65Q6ZU64 1925 aaKnown RBP19.68■□□□□ 0.74
SNX20-205ENST00000610485 IQGAP1P46940 1657 aa19.68■□□□□ 0.74
SNX20-205ENST00000610485 SCAF11Q99590 1463 aaKnown RBP19.68■□□□□ 0.74
SNX20-205ENST00000610485 IDI1Q13907 227 aa19.67■□□□□ 0.74
SNX20-205ENST00000610485 CPS1P31327 1500 aa19.66■□□□□ 0.74
SNX20-205ENST00000610485 IQGAP3Q86VI3 1631 aa19.66■□□□□ 0.74
SNX20-205ENST00000610485 TMEM2Q9UHN6 1383 aa19.66■□□□□ 0.74
SNX20-205ENST00000610485 GCC2Q8IWJ2 1684 aa19.65■□□□□ 0.74
SNX20-205ENST00000610485 ADGRB3O60242 1522 aa19.65■□□□□ 0.74
SNX20-205ENST00000610485 LTKP29376 864 aa19.64■□□□□ 0.73
SNX20-205ENST00000610485 SLC52A1Q9NWF4 448 aa19.64■□□□□ 0.73
SNX20-205ENST00000610485 TXNDC2Q86VQ3 553 aa19.63■□□□□ 0.73
SNX20-205ENST00000610485 STAG3Q9UJ98 1225 aa19.62■□□□□ 0.73
SNX20-205ENST00000610485 NUP155O75694 1391 aa19.61■□□□□ 0.73
SNX20-205ENST00000610485 EID1Q9Y6B2 187 aa19.61■□□□□ 0.73
SNX20-205ENST00000610485 E9PCH4 1651 aa19.6■□□□□ 0.73
SNX20-205ENST00000610485 NAIPQ13075 1403 aa19.58■□□□□ 0.72
SNX20-205ENST00000610485 UBAP1LF5GYI3 381 aa19.56■□□□□ 0.72
SNX20-205ENST00000610485 TMEM131LA2VDJ0 1609 aa19.54■□□□□ 0.72
SNX20-205ENST00000610485 ZFYVE9O95405 1425 aa19.54■□□□□ 0.72
SNX20-205ENST00000610485 STRCP1A6NGW2 1772 aa19.54■□□□□ 0.72
SNX20-205ENST00000610485 HFM1A2PYH4 1435 aa19.53■□□□□ 0.72
SNX20-205ENST00000610485 LRRC7Q96NW7 1537 aa19.53■□□□□ 0.72
SNX20-205ENST00000610485 RIMS2Q9UQ26 1411 aa19.5■□□□□ 0.71
SNX20-205ENST00000610485 PLEKHG1Q9ULL1 1385 aa19.47■□□□□ 0.71
SNX20-205ENST00000610485 TOM1O60784 492 aa19.47■□□□□ 0.71
SNX20-205ENST00000610485 ALKQ9UM73 1620 aa19.47■□□□□ 0.71
SNX20-205ENST00000610485 MYO5BQ9ULV0 1848 aa19.46■□□□□ 0.71
SNX20-205ENST00000610485 HDGFP51858 240 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms