RNA–Protein interactions for RNA: ENST00000610434.4

PSMB3-207, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 510 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-207ENST00000610434 PLA2R1Q13018 1463 aa17.33■□□□□ 0.37
PSMB3-207ENST00000610434 TNRQ92752 1358 aa17.32■□□□□ 0.36
PSMB3-207ENST00000610434 ILDR2Q71H61 639 aa17.32■□□□□ 0.36
PSMB3-207ENST00000610434 ZNF142P52746 1687 aaPredicted RBP17.32■□□□□ 0.36
PSMB3-207ENST00000610434 A2ML1A8K2U0 1454 aa17.31■□□□□ 0.36
PSMB3-207ENST00000610434 TCOF1Q13428 1488 aaKnown RBP17.31■□□□□ 0.36
PSMB3-207ENST00000610434 KANK4Q5T7N3 995 aaPredicted RBP17.31■□□□□ 0.36
PSMB3-207ENST00000610434 IQSEC2Q5JU85 1478 aa17.31■□□□□ 0.36
PSMB3-207ENST00000610434 LRRC9Q6ZRR7 1453 aa17.29■□□□□ 0.36
PSMB3-207ENST00000610434 VPS8Q8N3P4 1428 aa17.28■□□□□ 0.36
PSMB3-207ENST00000610434 DNMT1P26358 1616 aaKnown RBP17.28■□□□□ 0.36
PSMB3-207ENST00000610434 ANKLE2Q86XL3 938 aa17.27■□□□□ 0.36
PSMB3-207ENST00000610434 KDM5DQ9BY66 1539 aa17.26■□□□□ 0.35
PSMB3-207ENST00000610434 PZPP20742 1482 aa17.26■□□□□ 0.35
PSMB3-207ENST00000610434 THEMISQ8N1K5 641 aaPredicted RBP17.26■□□□□ 0.35
PSMB3-207ENST00000610434 MIA2Q96PC5 1412 aa17.26■□□□□ 0.35
PSMB3-207ENST00000610434 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.26■□□□□ 0.357e-7■■■■■ 52.8
PSMB3-207ENST00000610434 ARHGEF5Q12774 1597 aa17.25■□□□□ 0.35
PSMB3-207ENST00000610434 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
PSMB3-207ENST00000610434 PIP4K2BP78356 416 aa17.21■□□□□ 0.35
PSMB3-207ENST00000610434 FAM135AQ9P2D6 1515 aa17.21■□□□□ 0.34
PSMB3-207ENST00000610434 SOCS7O14512 581 aa17.2■□□□□ 0.34
PSMB3-207ENST00000610434 APLP2Q06481 763 aa17.19■□□□□ 0.34
PSMB3-207ENST00000610434 MYOM3Q5VTT5 1437 aa17.19■□□□□ 0.34
PSMB3-207ENST00000610434 SPATA31D1Q6ZQQ2 1576 aa17.19■□□□□ 0.34
PSMB3-207ENST00000610434 NLRP1Q9C000 1473 aa17.18■□□□□ 0.34
PSMB3-207ENST00000610434 UGGT1Q9NYU2 1555 aa17.18■□□□□ 0.34
PSMB3-207ENST00000610434 SHANK2Q9UPX8 1470 aa17.18■□□□□ 0.34
PSMB3-207ENST00000610434 TOM1O60784 492 aa17.17■□□□□ 0.34
PSMB3-207ENST00000610434 NEURL4Q96JN8 1562 aa17.17■□□□□ 0.34
PSMB3-207ENST00000610434 RRP7BPQ9NSQ0 103 aa17.17■□□□□ 0.34
PSMB3-207ENST00000610434 ABCC3O15438 1527 aa17.16■□□□□ 0.34
PSMB3-207ENST00000610434 MAP3K1Q13233 1512 aa17.16■□□□□ 0.34
PSMB3-207ENST00000610434 POLR1AO95602 1720 aaPredicted RBP17.16■□□□□ 0.34
PSMB3-207ENST00000610434 NPHP4O75161 1426 aaPredicted RBP17.16■□□□□ 0.34
PSMB3-207ENST00000610434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
PSMB3-207ENST00000610434 CFAP65Q6ZU64 1925 aaKnown RBP17.15■□□□□ 0.34
PSMB3-207ENST00000610434 MAST1Q9Y2H9 1570 aa17.15■□□□□ 0.34
PSMB3-207ENST00000610434 HSPA1LP34931 641 aa17.15■□□□□ 0.34
PSMB3-207ENST00000610434 RNF17Q9BXT8 1623 aaKnown RBP17.14■□□□□ 0.33
PSMB3-207ENST00000610434 CPS1P31327 1500 aa17.13■□□□□ 0.33
PSMB3-207ENST00000610434 KIF15Q9NS87 1388 aa17.12■□□□□ 0.33
PSMB3-207ENST00000610434 ERVK-7P63135 1459 aa17.12■□□□□ 0.33
PSMB3-207ENST00000610434 CHIC2Q9UKJ5 165 aa17.11■□□□□ 0.33
PSMB3-207ENST00000610434 ABCC5O15440 1437 aa17.11■□□□□ 0.33
PSMB3-207ENST00000610434 MED14O60244 1454 aa17.11■□□□□ 0.33
PSMB3-207ENST00000610434 DUOX2Q9NRD8 1548 aa17.11■□□□□ 0.33
PSMB3-207ENST00000610434 VWDEQ8N2E2 1590 aa17.11■□□□□ 0.33
PSMB3-207ENST00000610434 SENP3Q9H4L4 574 aaPredicted RBP17.1■□□□□ 0.33
PSMB3-207ENST00000610434 EIF2AK4Q9P2K8 1649 aaKnown RBP17.1■□□□□ 0.33
PSMB3-207ENST00000610434 TXNDC2Q86VQ3 553 aa17.09■□□□□ 0.33
PSMB3-207ENST00000610434 MROH1Q8NDA8 1641 aa17.09■□□□□ 0.33
PSMB3-207ENST00000610434 CEP152O94986 1710 aa17.08■□□□□ 0.32
PSMB3-207ENST00000610434 ZC3H13Q5T200 1668 aaKnown RBP17.08■□□□□ 0.32
PSMB3-207ENST00000610434 DEPDC5O75140 1603 aa17.08■□□□□ 0.32
PSMB3-207ENST00000610434 LTKP29376 864 aa17.08■□□□□ 0.32
PSMB3-207ENST00000610434 STAG3Q9UJ98 1225 aa17.06■□□□□ 0.32
PSMB3-207ENST00000610434 IQGAP1P46940 1657 aa17.06■□□□□ 0.32
PSMB3-207ENST00000610434 PTPN23Q9H3S7 1636 aa17.06■□□□□ 0.32
PSMB3-207ENST00000610434 DAPK1P53355 1430 aa17.04■□□□□ 0.32
PSMB3-207ENST00000610434 KANK1Q14678 1352 aa17.04■□□□□ 0.32
PSMB3-207ENST00000610434 EID1Q9Y6B2 187 aa17.04■□□□□ 0.32
PSMB3-207ENST00000610434 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
PSMB3-207ENST00000610434 ERBINQ96RT1 1412 aa17.04■□□□□ 0.32
PSMB3-207ENST00000610434 SCAF11Q99590 1463 aaKnown RBP17.02■□□□□ 0.32
PSMB3-207ENST00000610434 ARHGAP31Q2M1Z3 1444 aa17.02■□□□□ 0.31
PSMB3-207ENST00000610434 ANKRD30AQ9BXX3 1397 aa17.02■□□□□ 0.31
PSMB3-207ENST00000610434 UBR1Q8IWV7 1749 aa17.01■□□□□ 0.31
PSMB3-207ENST00000610434 LRRC7Q96NW7 1537 aa17.01■□□□□ 0.31
PSMB3-207ENST00000610434 STRCP1A6NGW2 1772 aa17■□□□□ 0.31
PSMB3-207ENST00000610434 IDI1Q13907 227 aa17■□□□□ 0.31
PSMB3-207ENST00000610434 FAM50AQ14320 339 aaKnown RBP17■□□□□ 0.31
PSMB3-207ENST00000610434 PRDM15P57071 1507 aaPredicted RBP17■□□□□ 0.31
PSMB3-207ENST00000610434 CROCC2H7BZ55 1655 aa16.99■□□□□ 0.31
PSMB3-207ENST00000610434 ALKQ9UM73 1620 aa16.98■□□□□ 0.31
PSMB3-207ENST00000610434 PHF23Q9BUL5 403 aaPredicted RBP16.97■□□□□ 0.31
PSMB3-207ENST00000610434 TMEM2Q9UHN6 1383 aa16.97■□□□□ 0.31
PSMB3-207ENST00000610434 ARHGAP23Q9P227 1491 aa16.97■□□□□ 0.31
PSMB3-207ENST00000610434 SLIT1O75093 1534 aa16.96■□□□□ 0.31
PSMB3-207ENST00000610434 MED1Q15648 1581 aaPredicted RBP16.95■□□□□ 0.3
PSMB3-207ENST00000610434 PIK3C2BO00750 1634 aa16.95■□□□□ 0.3
PSMB3-207ENST00000610434 BCANQ96GW7 911 aa16.94■□□□□ 0.3
PSMB3-207ENST00000610434 SLC26A8Q96RN1 970 aa16.94■□□□□ 0.3
PSMB3-207ENST00000610434 RBM33Q96EV2 1170 aaKnown RBP16.92■□□□□ 0.3
PSMB3-207ENST00000610434 SYNMO15061 1565 aa16.91■□□□□ 0.3
PSMB3-207ENST00000610434 PROSER2Q86WR7 435 aaPredicted RBP16.91■□□□□ 0.3
PSMB3-207ENST00000610434 EFCAB6Q5THR3 1501 aa16.91■□□□□ 0.3
PSMB3-207ENST00000610434 LMTK2Q8IWU2 1503 aa16.91■□□□□ 0.3
PSMB3-207ENST00000610434 KCNA6P17658 529 aa16.9■□□□□ 0.3
PSMB3-207ENST00000610434 SLC52A1Q9NWF4 448 aa16.9■□□□□ 0.3
PSMB3-207ENST00000610434 TMEM94Q12767 1356 aa16.89■□□□□ 0.29
PSMB3-207ENST00000610434 NOS1P29475 1434 aa16.88■□□□□ 0.29
PSMB3-207ENST00000610434 ANKRD50Q9ULJ7 1429 aa16.87■□□□□ 0.29
PSMB3-207ENST00000610434 ADGRL2O95490 1459 aa16.86■□□□□ 0.29
PSMB3-207ENST00000610434 CHGAP10645 457 aaKnown RBP16.85■□□□□ 0.29
PSMB3-207ENST00000610434 XIRP1Q702N8 1843 aaKnown RBP16.84■□□□□ 0.29
PSMB3-207ENST00000610434 PPP1R15AO75807 674 aaPredicted RBP16.84■□□□□ 0.29
PSMB3-207ENST00000610434 TET3O43151 1660 aa16.83■□□□□ 0.28
PSMB3-207ENST00000610434 KDM5AP29375 1690 aaKnown RBP16.82■□□□□ 0.28
PSMB3-207ENST00000610434 ADGRB3O60242 1522 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms