RNA–Protein interactions for RNA: ENST00000610289.2

PRAMEF28P-201, Transcript of PRAME family member 28, pseudogene, humanhuman

BASIC

Gene PRAMEF28P, Length 1,450 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF28P-201ENST00000610289 CCDC141Q6ZP82 1450 aa17.22■□□□□ 0.35
PRAMEF28P-201ENST00000610289 WASHC2CQ9Y4E1 1318 aa17.21■□□□□ 0.35
PRAMEF28P-201ENST00000610289 SOCS7O14512 581 aa17.2■□□□□ 0.34
PRAMEF28P-201ENST00000610289 CAMSAP2Q08AD1 1489 aa17.2■□□□□ 0.34
PRAMEF28P-201ENST00000610289 DNMT1P26358 1616 aaKnown RBP17.19■□□□□ 0.34
PRAMEF28P-201ENST00000610289 TNRQ92752 1358 aa17.19■□□□□ 0.34
PRAMEF28P-201ENST00000610289 TSPY4P0CV99 314 aa17.18■□□□□ 0.34
PRAMEF28P-201ENST00000610289 TSPY10P0CW01 314 aa17.18■□□□□ 0.34
PRAMEF28P-201ENST00000610289 PZPP20742 1482 aa17.17■□□□□ 0.34
PRAMEF28P-201ENST00000610289 SPATA31D1Q6ZQQ2 1576 aa17.16■□□□□ 0.34
PRAMEF28P-201ENST00000610289 KDM5DQ9BY66 1539 aa17.16■□□□□ 0.34
PRAMEF28P-201ENST00000610289 MIA2Q96PC5 1412 aa17.15■□□□□ 0.34
PRAMEF28P-201ENST00000610289 LOC105371045A0A1W2PR82 267 aa17.14■□□□□ 0.33
PRAMEF28P-201ENST00000610289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.14■□□□□ 0.33
PRAMEF28P-201ENST00000610289 ANKLE2Q86XL3 938 aa17.13■□□□□ 0.33
PRAMEF28P-201ENST00000610289 THEMISQ8N1K5 641 aaPredicted RBP17.13■□□□□ 0.33
PRAMEF28P-201ENST00000610289 ARHGEF5Q12774 1597 aa17.12■□□□□ 0.33
PRAMEF28P-201ENST00000610289 FAM135AQ9P2D6 1515 aa17.12■□□□□ 0.33
PRAMEF28P-201ENST00000610289 KANK4Q5T7N3 995 aaPredicted RBP17.12■□□□□ 0.33
PRAMEF28P-201ENST00000610289 LRRC9Q6ZRR7 1453 aa17.11■□□□□ 0.33
PRAMEF28P-201ENST00000610289 NEURL4Q96JN8 1562 aa17.11■□□□□ 0.33
PRAMEF28P-201ENST00000610289 VPS8Q8N3P4 1428 aa17.1■□□□□ 0.33
PRAMEF28P-201ENST00000610289 SHANK2Q9UPX8 1470 aa17.1■□□□□ 0.33
PRAMEF28P-201ENST00000610289 NLRP1Q9C000 1473 aa17.09■□□□□ 0.33
PRAMEF28P-201ENST00000610289 PIP4K2BP78356 416 aa17.08■□□□□ 0.32
PRAMEF28P-201ENST00000610289 TOM1O60784 492 aa17.07■□□□□ 0.32
PRAMEF28P-201ENST00000610289 HSPA1LP34931 641 aa17.07■□□□□ 0.32
PRAMEF28P-201ENST00000610289 SCAF1Q9H7N4 1312 aaKnown RBP17.07■□□□□ 0.32
PRAMEF28P-201ENST00000610289 UGGT1Q9NYU2 1555 aa17.07■□□□□ 0.32
PRAMEF28P-201ENST00000610289 POLR1AO95602 1720 aaPredicted RBP17.07■□□□□ 0.32
PRAMEF28P-201ENST00000610289 CPS1P31327 1500 aa17.06■□□□□ 0.32
PRAMEF28P-201ENST00000610289 NPHP4O75161 1426 aaPredicted RBP17.05■□□□□ 0.32
PRAMEF28P-201ENST00000610289 MED14O60244 1454 aa17.05■□□□□ 0.32
PRAMEF28P-201ENST00000610289 ABCC3O15438 1527 aa17.05■□□□□ 0.32
PRAMEF28P-201ENST00000610289 VWDEQ8N2E2 1590 aa17.04■□□□□ 0.32
PRAMEF28P-201ENST00000610289 MAST1Q9Y2H9 1570 aa17.04■□□□□ 0.32
PRAMEF28P-201ENST00000610289 RNF17Q9BXT8 1623 aaKnown RBP17.03■□□□□ 0.32
PRAMEF28P-201ENST00000610289 MYOM3Q5VTT5 1437 aa17.02■□□□□ 0.32
PRAMEF28P-201ENST00000610289 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
PRAMEF28P-201ENST00000610289 DEPDC5O75140 1603 aa17.01■□□□□ 0.31
PRAMEF28P-201ENST00000610289 ERVK-7P63135 1459 aa17.01■□□□□ 0.31
PRAMEF28P-201ENST00000610289 MROH1Q8NDA8 1641 aa16.99■□□□□ 0.31
PRAMEF28P-201ENST00000610289 RRP7BPQ9NSQ0 103 aa16.98■□□□□ 0.31
PRAMEF28P-201ENST00000610289 EIF2AK4Q9P2K8 1649 aaKnown RBP16.98■□□□□ 0.31
PRAMEF28P-201ENST00000610289 ZC3H13Q5T200 1668 aaKnown RBP16.97■□□□□ 0.31
PRAMEF28P-201ENST00000610289 ALKQ9UM73 1620 aa16.96■□□□□ 0.31
PRAMEF28P-201ENST00000610289 DUOX2Q9NRD8 1548 aa16.96■□□□□ 0.31
PRAMEF28P-201ENST00000610289 KIF15Q9NS87 1388 aa16.96■□□□□ 0.31
PRAMEF28P-201ENST00000610289 LTKP29376 864 aa16.96■□□□□ 0.31
PRAMEF28P-201ENST00000610289 IQGAP1P46940 1657 aa16.96■□□□□ 0.3
PRAMEF28P-201ENST00000610289 ABCC5O15440 1437 aa16.95■□□□□ 0.3
PRAMEF28P-201ENST00000610289 CFAP65Q6ZU64 1925 aaKnown RBP16.95■□□□□ 0.3
PRAMEF28P-201ENST00000610289 TXNDC2Q86VQ3 553 aa16.94■□□□□ 0.3
PRAMEF28P-201ENST00000610289 LRRC7Q96NW7 1537 aa16.94■□□□□ 0.3
PRAMEF28P-201ENST00000610289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.93■□□□□ 0.3
PRAMEF28P-201ENST00000610289 ARHGAP31Q2M1Z3 1444 aa16.93■□□□□ 0.3
PRAMEF28P-201ENST00000610289 STRCP1A6NGW2 1772 aa16.93■□□□□ 0.3
PRAMEF28P-201ENST00000610289 CEP152O94986 1710 aa16.92■□□□□ 0.3
PRAMEF28P-201ENST00000610289 MED1Q15648 1581 aaPredicted RBP16.91■□□□□ 0.3
PRAMEF28P-201ENST00000610289 SCAF11Q99590 1463 aaKnown RBP16.91■□□□□ 0.3
PRAMEF28P-201ENST00000610289 SENP3Q9H4L4 574 aaPredicted RBP16.91■□□□□ 0.3
PRAMEF28P-201ENST00000610289 ERBINQ96RT1 1412 aa16.91■□□□□ 0.3
PRAMEF28P-201ENST00000610289 UBR1Q8IWV7 1749 aa16.91■□□□□ 0.3
PRAMEF28P-201ENST00000610289 ARHGAP23Q9P227 1491 aa16.9■□□□□ 0.3
PRAMEF28P-201ENST00000610289 APLP2Q06481 763 aa16.9■□□□□ 0.3
PRAMEF28P-201ENST00000610289 PRDM15P57071 1507 aaPredicted RBP16.89■□□□□ 0.29
PRAMEF28P-201ENST00000610289 SLIT1O75093 1534 aa16.88■□□□□ 0.29
PRAMEF28P-201ENST00000610289 CHIC2Q9UKJ5 165 aa16.88■□□□□ 0.29
PRAMEF28P-201ENST00000610289 EID1Q9Y6B2 187 aa16.88■□□□□ 0.29
PRAMEF28P-201ENST00000610289 DAPK1P53355 1430 aa16.88■□□□□ 0.29
PRAMEF28P-201ENST00000610289 PTPN23Q9H3S7 1636 aa16.87■□□□□ 0.29
PRAMEF28P-201ENST00000610289 IDI1Q13907 227 aa16.86■□□□□ 0.29
PRAMEF28P-201ENST00000610289 KANK1Q14678 1352 aa16.86■□□□□ 0.29
PRAMEF28P-201ENST00000610289 TMEM2Q9UHN6 1383 aa16.86■□□□□ 0.29
PRAMEF28P-201ENST00000610289 STAG3Q9UJ98 1225 aa16.86■□□□□ 0.29
PRAMEF28P-201ENST00000610289 FGD6Q6ZV73 1430 aa16.85■□□□□ 0.29
PRAMEF28P-201ENST00000610289 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
PRAMEF28P-201ENST00000610289 SYNMO15061 1565 aa16.84■□□□□ 0.29
PRAMEF28P-201ENST00000610289 ANKRD30AQ9BXX3 1397 aa16.84■□□□□ 0.29
PRAMEF28P-201ENST00000610289 CROCC2H7BZ55 1655 aa16.84■□□□□ 0.29
PRAMEF28P-201ENST00000610289 PIK3C2BO00750 1634 aa16.82■□□□□ 0.28
PRAMEF28P-201ENST00000610289 LMTK2Q8IWU2 1503 aa16.81■□□□□ 0.28
PRAMEF28P-201ENST00000610289 SLC26A8Q96RN1 970 aa16.8■□□□□ 0.28
PRAMEF28P-201ENST00000610289 KCNA6P17658 529 aa16.79■□□□□ 0.28
PRAMEF28P-201ENST00000610289 NOS1P29475 1434 aa16.78■□□□□ 0.28
PRAMEF28P-201ENST00000610289 EFCAB6Q5THR3 1501 aa16.78■□□□□ 0.28
PRAMEF28P-201ENST00000610289 TMEM94Q12767 1356 aa16.78■□□□□ 0.28
PRAMEF28P-201ENST00000610289 XIRP1Q702N8 1843 aaKnown RBP16.77■□□□□ 0.28
PRAMEF28P-201ENST00000610289 RBM33Q96EV2 1170 aaKnown RBP16.77■□□□□ 0.28
PRAMEF28P-201ENST00000610289 SLC52A1Q9NWF4 448 aa16.77■□□□□ 0.28
PRAMEF28P-201ENST00000610289 RGS17Q9UGC6 210 aaPredicted RBP16.76■□□□□ 0.27
PRAMEF28P-201ENST00000610289 FAM135BQ49AJ0 1406 aa16.76■□□□□ 0.27
PRAMEF28P-201ENST00000610289 TET3O43151 1660 aa16.76■□□□□ 0.27
PRAMEF28P-201ENST00000610289 PROSER2Q86WR7 435 aaPredicted RBP16.75■□□□□ 0.27
PRAMEF28P-201ENST00000610289 FAM50AQ14320 339 aaKnown RBP16.74■□□□□ 0.27
PRAMEF28P-201ENST00000610289 KDM5AP29375 1690 aaKnown RBP16.74■□□□□ 0.27
PRAMEF28P-201ENST00000610289 ADGRL2O95490 1459 aa16.74■□□□□ 0.27
PRAMEF28P-201ENST00000610289 ANKRD50Q9ULJ7 1429 aa16.72■□□□□ 0.27
PRAMEF28P-201ENST00000610289 BCANQ96GW7 911 aa16.72■□□□□ 0.27
PRAMEF28P-201ENST00000610289 ADGRB3O60242 1522 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms