RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 DUOX2Q9NRD8 1548 aa23.4■■□□□ 1.34
LMBR1-220ENST00000609081 DAPK1P53355 1430 aa23.4■■□□□ 1.34
LMBR1-220ENST00000609081 RNF17Q9BXT8 1623 aaKnown RBP23.39■■□□□ 1.33
LMBR1-220ENST00000609081 PTPRKQ15262 1439 aa23.36■■□□□ 1.33
LMBR1-220ENST00000609081 WASHC2CQ9Y4E1 1318 aa23.35■■□□□ 1.33
LMBR1-220ENST00000609081 ZC3H13Q5T200 1668 aaKnown RBP23.35■■□□□ 1.33
LMBR1-220ENST00000609081 ERBINQ96RT1 1412 aa23.34■■□□□ 1.33
LMBR1-220ENST00000609081 DMRT2Q9Y5R5 561 aa23.34■■□□□ 1.33
LMBR1-220ENST00000609081 KIF15Q9NS87 1388 aa23.34■■□□□ 1.33
LMBR1-220ENST00000609081 ANKRD30AQ9BXX3 1397 aa23.32■■□□□ 1.32
LMBR1-220ENST00000609081 ZNF142P52746 1687 aaPredicted RBP23.32■■□□□ 1.32
LMBR1-220ENST00000609081 PZPP20742 1482 aa23.31■■□□□ 1.32
LMBR1-220ENST00000609081 MYO3AQ8NEV4 1616 aa23.31■■□□□ 1.32
LMBR1-220ENST00000609081 STRCQ7RTU9 1775 aa23.29■■□□□ 1.32
LMBR1-220ENST00000609081 FAM50AQ14320 339 aaKnown RBP23.27■■□□□ 1.32
LMBR1-220ENST00000609081 RRP7BPQ9NSQ0 103 aa23.27■■□□□ 1.32
LMBR1-220ENST00000609081 ADGRL2O95490 1459 aa23.27■■□□□ 1.32
LMBR1-220ENST00000609081 CEP170BQ9Y4F5 1589 aaPredicted RBP23.27■■□□□ 1.32
LMBR1-220ENST00000609081 MROH1Q8NDA8 1641 aa23.26■■□□□ 1.31
LMBR1-220ENST00000609081 NCOA1Q15788 1441 aa23.26■■□□□ 1.31
LMBR1-220ENST00000609081 ABCC3O15438 1527 aa23.26■■□□□ 1.31
LMBR1-220ENST00000609081 PRDM15P57071 1507 aaPredicted RBP23.25■■□□□ 1.31
LMBR1-220ENST00000609081 TNRQ92752 1358 aa23.24■■□□□ 1.31
LMBR1-220ENST00000609081 DEPDC5O75140 1603 aa23.23■■□□□ 1.31
LMBR1-220ENST00000609081 PTPRTO14522 1441 aa23.23■■□□□ 1.31
LMBR1-220ENST00000609081 A2ML1A8K2U0 1454 aa23.23■■□□□ 1.31
LMBR1-220ENST00000609081 PLA2R1Q13018 1463 aa23.23■■□□□ 1.31
LMBR1-220ENST00000609081 CAMSAP1Q5T5Y3 1602 aa23.22■■□□□ 1.31
LMBR1-220ENST00000609081 CHIC2Q9UKJ5 165 aa23.21■■□□□ 1.31
LMBR1-220ENST00000609081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.21■■□□□ 1.31
LMBR1-220ENST00000609081 KANK1Q14678 1352 aa23.2■■□□□ 1.3
LMBR1-220ENST00000609081 NLRP1Q9C000 1473 aa23.19■■□□□ 1.3
LMBR1-220ENST00000609081 CEP152O94986 1710 aa23.19■■□□□ 1.3
LMBR1-220ENST00000609081 FBXO31Q5XUX0 539 aaPredicted RBP23.18■■□□□ 1.3
LMBR1-220ENST00000609081 ARHGAP31Q2M1Z3 1444 aa23.17■■□□□ 1.3
LMBR1-220ENST00000609081 PKD2Q13563 968 aa23.17■■□□□ 1.3
LMBR1-220ENST00000609081 SPATA31D1Q6ZQQ2 1576 aa23.17■■□□□ 1.3
LMBR1-220ENST00000609081 ROCK1Q13464 1354 aa23.14■■□□□ 1.3
LMBR1-220ENST00000609081 ANKRD50Q9ULJ7 1429 aa23.14■■□□□ 1.29
LMBR1-220ENST00000609081 ERVK-7P63135 1459 aa23.13■■□□□ 1.29
LMBR1-220ENST00000609081 ILDR1Q86SU0 546 aaPredicted RBP23.13■■□□□ 1.29
LMBR1-220ENST00000609081 LMTK2Q8IWU2 1503 aa23.13■■□□□ 1.29
LMBR1-220ENST00000609081 VWDEQ8N2E2 1590 aa23.12■■□□□ 1.29
LMBR1-220ENST00000609081 FBXO41Q8TF61 875 aa23.11■■□□□ 1.29
LMBR1-220ENST00000609081 THEMISQ8N1K5 641 aaPredicted RBP23.1■■□□□ 1.29
LMBR1-220ENST00000609081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.1■■□□□ 1.29
LMBR1-220ENST00000609081 UGGT1Q9NYU2 1555 aa23.1■■□□□ 1.29
LMBR1-220ENST00000609081 CFAP65Q6ZU64 1925 aaKnown RBP23.08■■□□□ 1.28
LMBR1-220ENST00000609081 POLR1AO95602 1720 aaPredicted RBP23.06■■□□□ 1.28
LMBR1-220ENST00000609081 PPARGC1BQ86YN6 1023 aaKnown RBP23.06■■□□□ 1.28
LMBR1-220ENST00000609081 CERKQ8TCT0 537 aa23.06■■□□□ 1.28
LMBR1-220ENST00000609081 RRBP1Q9P2E9 1410 aaKnown RBP23.06■■□□□ 1.28
LMBR1-220ENST00000609081 NCKAP5LQ9HCH0 1330 aa23.06■■□□□ 1.28
LMBR1-220ENST00000609081 EFCAB6Q5THR3 1501 aa23.03■■□□□ 1.28
LMBR1-220ENST00000609081 ANKLE2Q86XL3 938 aa23.02■■□□□ 1.28
LMBR1-220ENST00000609081 RPRD2Q5VT52 1461 aaKnown RBP23.02■■□□□ 1.28
LMBR1-220ENST00000609081 UNC13BO14795 1591 aa23.01■■□□□ 1.27
LMBR1-220ENST00000609081 TET3O43151 1660 aa22.99■■□□□ 1.27
LMBR1-220ENST00000609081 UBR1Q8IWV7 1749 aa22.99■■□□□ 1.27
LMBR1-220ENST00000609081 KDM5AP29375 1690 aaKnown RBP22.98■■□□□ 1.27
LMBR1-220ENST00000609081 MED14O60244 1454 aa22.98■■□□□ 1.27
LMBR1-220ENST00000609081 IQSEC2Q5JU85 1478 aa22.98■■□□□ 1.27
LMBR1-220ENST00000609081 NEURL4Q96JN8 1562 aa22.97■■□□□ 1.27
LMBR1-220ENST00000609081 LTBP4Q8N2S1 1624 aa22.97■■□□□ 1.27
LMBR1-220ENST00000609081 ITGAEP38570 1179 aa22.97■■□□□ 1.27
LMBR1-220ENST00000609081 GCC2Q8IWJ2 1684 aa22.96■■□□□ 1.27
LMBR1-220ENST00000609081 NOS1P29475 1434 aa22.95■■□□□ 1.26
LMBR1-220ENST00000609081 IQGAP3Q86VI3 1631 aa22.93■■□□□ 1.26
LMBR1-220ENST00000609081 SLIT1O75093 1534 aa22.92■■□□□ 1.26
LMBR1-220ENST00000609081 SLC52A1Q9NWF4 448 aa22.92■■□□□ 1.26
LMBR1-220ENST00000609081 NPHP4O75161 1426 aaPredicted RBP22.91■■□□□ 1.26
LMBR1-220ENST00000609081 PIK3C2BO00750 1634 aa22.91■■□□□ 1.26
LMBR1-220ENST00000609081 SYNMO15061 1565 aa22.9■■□□□ 1.26
LMBR1-220ENST00000609081 ARHGAP23Q9P227 1491 aa22.9■■□□□ 1.26
LMBR1-220ENST00000609081 IQGAP1P46940 1657 aa22.9■■□□□ 1.26
LMBR1-220ENST00000609081 ZNF335Q9H4Z2 1342 aaPredicted RBP22.89■■□□□ 1.26
LMBR1-220ENST00000609081 STAG3Q9UJ98 1225 aa22.89■■□□□ 1.25
LMBR1-220ENST00000609081 SCAF11Q99590 1463 aaKnown RBP22.88■■□□□ 1.25
LMBR1-220ENST00000609081 IDI1Q13907 227 aa22.87■■□□□ 1.25
LMBR1-220ENST00000609081 NUP155O75694 1391 aa22.87■■□□□ 1.25
LMBR1-220ENST00000609081 EID1Q9Y6B2 187 aa22.86■■□□□ 1.25
LMBR1-220ENST00000609081 CPS1P31327 1500 aa22.85■■□□□ 1.25
LMBR1-220ENST00000609081 TMEM2Q9UHN6 1383 aa22.85■■□□□ 1.25
LMBR1-220ENST00000609081 E9PCH4 1651 aa22.84■■□□□ 1.25
LMBR1-220ENST00000609081 ADGRB3O60242 1522 aa22.84■■□□□ 1.25
LMBR1-220ENST00000609081 TXNDC2Q86VQ3 553 aa22.83■■□□□ 1.25
LMBR1-220ENST00000609081 NAIPQ13075 1403 aa22.82■■□□□ 1.24
LMBR1-220ENST00000609081 HFM1A2PYH4 1435 aa22.81■■□□□ 1.24
LMBR1-220ENST00000609081 LTKP29376 864 aa22.77■■□□□ 1.24
LMBR1-220ENST00000609081 HDGFP51858 240 aaKnown RBP22.76■■□□□ 1.23
LMBR1-220ENST00000609081 TMEM131LA2VDJ0 1609 aa22.75■■□□□ 1.23
LMBR1-220ENST00000609081 SPHKAPQ2M3C7 1700 aa22.71■■□□□ 1.23
LMBR1-220ENST00000609081 MYO5BQ9ULV0 1848 aa22.71■■□□□ 1.23
LMBR1-220ENST00000609081 ZFYVE9O95405 1425 aa22.69■■□□□ 1.22
LMBR1-220ENST00000609081 ACIN1Q9UKV3 1341 aaKnown RBP22.69■■□□□ 1.22
LMBR1-220ENST00000609081 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.69■■□□□ 1.22
LMBR1-220ENST00000609081 RIMS2Q9UQ26 1411 aa22.66■■□□□ 1.22
LMBR1-220ENST00000609081 STRCP1A6NGW2 1772 aa22.66■■□□□ 1.22
LMBR1-220ENST00000609081 UBAP1LF5GYI3 381 aa22.66■■□□□ 1.22
LMBR1-220ENST00000609081 PLEKHG1Q9ULL1 1385 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms