RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 ARHGAP35Q9NRY4 1499 aa15.36■□□□□ 0.05
CTCFL-220ENST00000608858 POLR1AO95602 1720 aaPredicted RBP15.35■□□□□ 0.05
CTCFL-220ENST00000608858 LRRC7Q96NW7 1537 aa15.35■□□□□ 0.05
CTCFL-220ENST00000608858 KIF3BO15066 747 aa15.35■□□□□ 0.05
CTCFL-220ENST00000608858 CFDP1Q9UEE9 299 aaPredicted RBP15.35■□□□□ 0.05
CTCFL-220ENST00000608858 SYCP2Q9BX26 1530 aa15.34■□□□□ 0.05
CTCFL-220ENST00000608858 CDC42BPAQ5VT25 1732 aa15.33■□□□□ 0.04
CTCFL-220ENST00000608858 ZNF644Q9H582 1327 aaPredicted RBP15.33■□□□□ 0.04
CTCFL-220ENST00000608858 WASHC2CQ9Y4E1 1318 aa15.33■□□□□ 0.04
CTCFL-220ENST00000608858 STRCP1A6NGW2 1772 aa15.33■□□□□ 0.04
CTCFL-220ENST00000608858 RBM33Q96EV2 1170 aaKnown RBP15.32■□□□□ 0.04
CTCFL-220ENST00000608858 ATP7AQ04656 1500 aa15.32■□□□□ 0.04
CTCFL-220ENST00000608858 UPF1Q92900 1129 aaKnown RBP eCLIP15.31■□□□□ 0.04
CTCFL-220ENST00000608858 SETD1AO15047 1707 aaKnown RBP15.3■□□□□ 0.04
CTCFL-220ENST00000608858 EEA1Q15075 1411 aa15.3■□□□□ 0.04
CTCFL-220ENST00000608858 GPATCH8Q9UKJ3 1502 aaKnown RBP15.29■□□□□ 0.04
CTCFL-220ENST00000608858 TRIM52Q96A61 297 aa15.29■□□□□ 0.04
CTCFL-220ENST00000608858 MIA2Q96PC5 1412 aa15.28■□□□□ 0.04
CTCFL-220ENST00000608858 PLXNC1O60486 1568 aa15.27■□□□□ 0.03
CTCFL-220ENST00000608858 UGGT1Q9NYU2 1555 aa15.26■□□□□ 0.03
CTCFL-220ENST00000608858 FAM135AQ9P2D6 1515 aa15.26■□□□□ 0.03
CTCFL-220ENST00000608858 MED14O60244 1454 aa15.26■□□□□ 0.03
CTCFL-220ENST00000608858 DHX29Q7Z478 1369 aaKnown RBP15.24■□□□□ 0.03
CTCFL-220ENST00000608858 TXNDC2Q86VQ3 553 aa15.24■□□□□ 0.03
CTCFL-220ENST00000608858 IQGAP1P46940 1657 aa15.23■□□□□ 0.03
CTCFL-220ENST00000608858 LTKP29376 864 aa15.23■□□□□ 0.03
CTCFL-220ENST00000608858 CCNB3Q8WWL7 1395 aa15.23■□□□□ 0.03
CTCFL-220ENST00000608858 RNF17Q9BXT8 1623 aaKnown RBP15.22■□□□□ 0.03
CTCFL-220ENST00000608858 KIAA1107Q9UPP5 1409 aa15.22■□□□□ 0.03
CTCFL-220ENST00000608858 INO80Q9ULG1 1556 aaPredicted RBP15.22■□□□□ 0.03
CTCFL-220ENST00000608858 PZPP20742 1482 aa15.2■□□□□ 0.02
CTCFL-220ENST00000608858 FAM135BQ49AJ0 1406 aa15.2■□□□□ 0.02
CTCFL-220ENST00000608858 DEPDC5O75140 1603 aa15.2■□□□□ 0.02
CTCFL-220ENST00000608858 CASKIN1Q8WXD9 1431 aa15.19■□□□□ 0.02
CTCFL-220ENST00000608858 PROSER2Q86WR7 435 aaPredicted RBP15.19■□□□□ 0.02
CTCFL-220ENST00000608858 ADGBQ8N7X0 1667 aa15.19■□□□□ 0.02
CTCFL-220ENST00000608858 MEX3CQ5U5Q3 659 aaKnown RBP15.18■□□□□ 0.02
CTCFL-220ENST00000608858 CCDC18Q5T9S5 1454 aa15.18■□□□□ 0.02
CTCFL-220ENST00000608858 NLRP1Q9C000 1473 aa15.18■□□□□ 0.02
CTCFL-220ENST00000608858 CFAP65Q6ZU64 1925 aaKnown RBP15.17■□□□□ 0.02
CTCFL-220ENST00000608858 PLEKHH2Q8IVE3 1493 aa15.17■□□□□ 0.02
CTCFL-220ENST00000608858 XIRP1Q702N8 1843 aaKnown RBP15.16■□□□□ 0.02
CTCFL-220ENST00000608858 TMEM94Q12767 1356 aa15.15■□□□□ 0.02
CTCFL-220ENST00000608858 SLC26A8Q96RN1 970 aa15.15■□□□□ 0.02
CTCFL-220ENST00000608858 EID1Q9Y6B2 187 aa15.14■□□□□ 0.01
CTCFL-220ENST00000608858 KDM5DQ9BY66 1539 aa15.13■□□□□ 0.01
CTCFL-220ENST00000608858 SYNMO15061 1565 aa15.13■□□□□ 0.01
CTCFL-220ENST00000608858 RXRBP28702 533 aa15.13■□□□□ 0.01
CTCFL-220ENST00000608858 MAPK8IP2Q13387 824 aaPredicted RBP15.13■□□□□ 0.01
CTCFL-220ENST00000608858 SLAIN2Q9P270 581 aa15.13■□□□□ 0.01
CTCFL-220ENST00000608858 MBD5Q9P267 1494 aa15.13■□□□□ 0.01
CTCFL-220ENST00000608858 SRCAPQ6ZRS2 3230 aa15.12■□□□□ 0.01
CTCFL-220ENST00000608858 ROBO1Q9Y6N7 1651 aa15.12■□□□□ 0.01
CTCFL-220ENST00000608858 RTEL1-TNFRSF6BF6WH68 1400 aa15.11■□□□□ 0.01
CTCFL-220ENST00000608858 ZNF772Q68DY9 489 aaPredicted RBP15.11■□□□□ 0.01
CTCFL-220ENST00000608858 ZC3H13Q5T200 1668 aaKnown RBP15.1■□□□□ 0.01
CTCFL-220ENST00000608858 NUTM2BA6NNL0 878 aaPredicted RBP15.1■□□□□ 0.01
CTCFL-220ENST00000608858 NUTM2EB1AL46 878 aaPredicted RBP15.1■□□□□ 0.01
CTCFL-220ENST00000608858 KCNA6P17658 529 aa15.1■□□□□ 0.01
CTCFL-220ENST00000608858 NUTM2AQ8IVF1 878 aaPredicted RBP15.1■□□□□ 0.01
CTCFL-220ENST00000608858 BCANQ96GW7 911 aa15.1■□□□□ 0.01
CTCFL-220ENST00000608858 MTUS2Q5JR59 1369 aa15.1■□□□□ 0.01
CTCFL-220ENST00000608858 JCADQ9P266 1359 aa15.1■□□□□ 0.01
CTCFL-220ENST00000608858 SCAF11Q99590 1463 aaKnown RBP15.09■□□□□ 0.01
CTCFL-220ENST00000608858 STAG3Q9UJ98 1225 aa15.09■□□□□ 0.01
CTCFL-220ENST00000608858 TSPY4P0CV99 314 aa15.07■□□□□ 0
CTCFL-220ENST00000608858 TSPY10P0CW01 314 aa15.07■□□□□ 0
CTCFL-220ENST00000608858 NCOA2Q15596 1464 aa15.05■□□□□ -0
CTCFL-220ENST00000608858 PHLPP1O60346 1717 aa15.05■□□□□ -0
CTCFL-220ENST00000608858 LRP6O75581 1613 aa15.03■□□□□ -0
CTCFL-220ENST00000608858 ERVK-7P63135 1459 aa15.03■□□□□ -0
CTCFL-220ENST00000608858 FYCO1Q9BQS8 1478 aa15.03■□□□□ -0
CTCFL-220ENST00000608858 NUTM2DQ5VT03 806 aaPredicted RBP15.03■□□□□ -0
CTCFL-220ENST00000608858 UBR1Q8IWV7 1749 aa15.03■□□□□ -0
CTCFL-220ENST00000608858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.02■□□□□ -01e-10■□□□□ 8.3
CTCFL-220ENST00000608858 MSH6P52701 1360 aa15.01□□□□□ -0.01
CTCFL-220ENST00000608858 RSPH4AQ5TD94 716 aa15.01□□□□□ -0.01
CTCFL-220ENST00000608858 C14orf37Q86TY3 774 aa15□□□□□ -0.01
CTCFL-220ENST00000608858 ABCC3O15438 1527 aa15□□□□□ -0.01
CTCFL-220ENST00000608858 TIAM1Q13009 1591 aa14.99□□□□□ -0.01
CTCFL-220ENST00000608858 SPATA31A6Q5VVP1 1343 aa14.99□□□□□ -0.01
CTCFL-220ENST00000608858 QTRT2Q9H974 415 aaKnown RBP14.99□□□□□ -0.01
CTCFL-220ENST00000608858 ARHGAP23Q9P227 1491 aa14.99□□□□□ -0.01
CTCFL-220ENST00000608858 AFF2P51816 1311 aa14.98□□□□□ -0.01
CTCFL-220ENST00000608858 CCDC141Q6ZP82 1450 aa14.98□□□□□ -0.01
CTCFL-220ENST00000608858 IDI1Q13907 227 aa14.98□□□□□ -0.01
CTCFL-220ENST00000608858 PPP4R3CPQ6ZMV5 832 aa14.98□□□□□ -0.01
CTCFL-220ENST00000608858 TMEM2Q9UHN6 1383 aa14.98□□□□□ -0.01
CTCFL-220ENST00000608858 MAP3K1Q13233 1512 aa14.97□□□□□ -0.01
CTCFL-220ENST00000608858 SLIT1O75093 1534 aa14.97□□□□□ -0.01
CTCFL-220ENST00000608858 ZRANB1Q9UGI0 708 aa14.96□□□□□ -0.01
CTCFL-220ENST00000608858 C8orf37Q96NL8 207 aa14.95□□□□□ -0.02
CTCFL-220ENST00000608858 CAMSAP2Q08AD1 1489 aa14.95□□□□□ -0.02
CTCFL-220ENST00000608858 LRRC9Q6ZRR7 1453 aa14.94□□□□□ -0.02
CTCFL-220ENST00000608858 PRDM15P57071 1507 aaPredicted RBP14.93□□□□□ -0.02
CTCFL-220ENST00000608858 CEP152O94986 1710 aa14.93□□□□□ -0.02
CTCFL-220ENST00000608858 COL16A1Q07092 1604 aaPredicted RBP14.92□□□□□ -0.02
CTCFL-220ENST00000608858 ATF3P18847 181 aa14.91□□□□□ -0.02
CTCFL-220ENST00000608858 RBM6P78332 1123 aaKnown RBP14.91□□□□□ -0.02
CTCFL-220ENST00000608858 PIK3C2BO00750 1634 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms