RNA–Protein interactions for RNA: ENST00000607357.1

COPS9-205, Transcript of COP9 signalosome subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS9, Length 418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-205ENST00000607357 SHANK2Q9UPX8 1470 aa23.38■■□□□ 1.33
COPS9-205ENST00000607357 RNF17Q9BXT8 1623 aaKnown RBP23.38■■□□□ 1.33
COPS9-205ENST00000607357 EIF2AK4Q9P2K8 1649 aaKnown RBP23.38■■□□□ 1.33
COPS9-205ENST00000607357 ZNF142P52746 1687 aaPredicted RBP23.38■■□□□ 1.33
COPS9-205ENST00000607357 DNMT1P26358 1616 aaKnown RBP23.37■■□□□ 1.33
COPS9-205ENST00000607357 ABCC5O15440 1437 aa23.34■■□□□ 1.33
COPS9-205ENST00000607357 DUOX2Q9NRD8 1548 aa23.33■■□□□ 1.33
COPS9-205ENST00000607357 CEP170BQ9Y4F5 1589 aaPredicted RBP23.33■■□□□ 1.33
COPS9-205ENST00000607357 DAPK1P53355 1430 aa23.33■■□□□ 1.32
COPS9-205ENST00000607357 PZPP20742 1482 aa23.31■■□□□ 1.32
COPS9-205ENST00000607357 CAMSAP1Q5T5Y3 1602 aa23.31■■□□□ 1.32
COPS9-205ENST00000607357 NCOA1Q15788 1441 aa23.31■■□□□ 1.32
COPS9-205ENST00000607357 ZC3H13Q5T200 1668 aaKnown RBP23.31■■□□□ 1.32
COPS9-205ENST00000607357 WASHC2CQ9Y4E1 1318 aa23.3■■□□□ 1.32
COPS9-205ENST00000607357 MROH1Q8NDA8 1641 aa23.3■■□□□ 1.32
COPS9-205ENST00000607357 DMRT2Q9Y5R5 561 aa23.29■■□□□ 1.32
COPS9-205ENST00000607357 KIF15Q9NS87 1388 aa23.28■■□□□ 1.32
COPS9-205ENST00000607357 ABCC3O15438 1527 aa23.28■■□□□ 1.32
COPS9-205ENST00000607357 PTPRTO14522 1441 aa23.26■■□□□ 1.31
COPS9-205ENST00000607357 ERBINQ96RT1 1412 aa23.25■■□□□ 1.31
COPS9-205ENST00000607357 A2ML1A8K2U0 1454 aa23.25■■□□□ 1.31
COPS9-205ENST00000607357 TNRQ92752 1358 aa23.25■■□□□ 1.31
COPS9-205ENST00000607357 FBXO41Q8TF61 875 aa23.24■■□□□ 1.31
COPS9-205ENST00000607357 CEP152O94986 1710 aa23.24■■□□□ 1.31
COPS9-205ENST00000607357 PLA2R1Q13018 1463 aa23.24■■□□□ 1.31
COPS9-205ENST00000607357 PRDM15P57071 1507 aaPredicted RBP23.23■■□□□ 1.31
COPS9-205ENST00000607357 FBXO31Q5XUX0 539 aaPredicted RBP23.22■■□□□ 1.31
COPS9-205ENST00000607357 RRP7BPQ9NSQ0 103 aa23.21■■□□□ 1.31
COPS9-205ENST00000607357 DEPDC5O75140 1603 aa23.19■■□□□ 1.3
COPS9-205ENST00000607357 ANKRD30AQ9BXX3 1397 aa23.19■■□□□ 1.3
COPS9-205ENST00000607357 CHIC2Q9UKJ5 165 aa23.18■■□□□ 1.3
COPS9-205ENST00000607357 ADGRL2O95490 1459 aa23.17■■□□□ 1.3
COPS9-205ENST00000607357 FAM50AQ14320 339 aaKnown RBP23.17■■□□□ 1.3
COPS9-205ENST00000607357 CERKQ8TCT0 537 aa23.17■■□□□ 1.3
COPS9-205ENST00000607357 SPATA31D1Q6ZQQ2 1576 aa23.17■■□□□ 1.3
COPS9-205ENST00000607357 NLRP1Q9C000 1473 aa23.17■■□□□ 1.3
COPS9-205ENST00000607357 NCKAP5LQ9HCH0 1330 aa23.15■■□□□ 1.3
COPS9-205ENST00000607357 ERVK-7P63135 1459 aa23.15■■□□□ 1.3
COPS9-205ENST00000607357 PKD2Q13563 968 aa23.13■■□□□ 1.29
COPS9-205ENST00000607357 POLR1AO95602 1720 aaPredicted RBP23.13■■□□□ 1.29
COPS9-205ENST00000607357 UGGT1Q9NYU2 1555 aa23.11■■□□□ 1.29
COPS9-205ENST00000607357 LTBP4Q8N2S1 1624 aa23.11■■□□□ 1.29
COPS9-205ENST00000607357 ARHGAP31Q2M1Z3 1444 aa23.09■■□□□ 1.29
COPS9-205ENST00000607357 CFAP65Q6ZU64 1925 aaKnown RBP23.09■■□□□ 1.29
COPS9-205ENST00000607357 VWDEQ8N2E2 1590 aa23.09■■□□□ 1.29
COPS9-205ENST00000607357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.08■■□□□ 1.29
COPS9-205ENST00000607357 KANK1Q14678 1352 aa23.08■■□□□ 1.29
COPS9-205ENST00000607357 NEURL4Q96JN8 1562 aa23.07■■□□□ 1.28
COPS9-205ENST00000607357 LMTK2Q8IWU2 1503 aa23.07■■□□□ 1.28
COPS9-205ENST00000607357 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.04■■□□□ 1.28
COPS9-205ENST00000607357 ANKRD50Q9ULJ7 1429 aa23.04■■□□□ 1.28
COPS9-205ENST00000607357 PPARGC1BQ86YN6 1023 aaKnown RBP23.03■■□□□ 1.28
COPS9-205ENST00000607357 THEMISQ8N1K5 641 aaPredicted RBP23.03■■□□□ 1.28
COPS9-205ENST00000607357 UBR1Q8IWV7 1749 aa23.02■■□□□ 1.28
COPS9-205ENST00000607357 EFCAB6Q5THR3 1501 aa23.01■■□□□ 1.27
COPS9-205ENST00000607357 ZNF335Q9H4Z2 1342 aaPredicted RBP23■■□□□ 1.27
COPS9-205ENST00000607357 IQSEC2Q5JU85 1478 aa22.99■■□□□ 1.27
COPS9-205ENST00000607357 ROCK1Q13464 1354 aa22.99■■□□□ 1.27
COPS9-205ENST00000607357 ANKLE2Q86XL3 938 aa22.98■■□□□ 1.27
COPS9-205ENST00000607357 UNC13BO14795 1591 aa22.97■■□□□ 1.27
COPS9-205ENST00000607357 MED14O60244 1454 aa22.97■■□□□ 1.27
COPS9-205ENST00000607357 PIK3C2BO00750 1634 aa22.96■■□□□ 1.27
COPS9-205ENST00000607357 NPHP4O75161 1426 aaPredicted RBP22.95■■□□□ 1.26
COPS9-205ENST00000607357 IQGAP1P46940 1657 aa22.95■■□□□ 1.26
COPS9-205ENST00000607357 SYNMO15061 1565 aa22.94■■□□□ 1.26
COPS9-205ENST00000607357 TET3O43151 1660 aa22.93■■□□□ 1.26
COPS9-205ENST00000607357 KDM5AP29375 1690 aaKnown RBP22.91■■□□□ 1.26
COPS9-205ENST00000607357 GCC2Q8IWJ2 1684 aa22.91■■□□□ 1.26
COPS9-205ENST00000607357 SLIT1O75093 1534 aa22.91■■□□□ 1.26
COPS9-205ENST00000607357 RPRD2Q5VT52 1461 aaKnown RBP22.91■■□□□ 1.26
COPS9-205ENST00000607357 ARHGAP23Q9P227 1491 aa22.91■■□□□ 1.26
COPS9-205ENST00000607357 NOS1P29475 1434 aa22.91■■□□□ 1.26
COPS9-205ENST00000607357 ITGAEP38570 1179 aa22.9■■□□□ 1.26
COPS9-205ENST00000607357 RRBP1Q9P2E9 1410 aaKnown RBP22.9■■□□□ 1.26
COPS9-205ENST00000607357 SCAF11Q99590 1463 aaKnown RBP22.89■■□□□ 1.25
COPS9-205ENST00000607357 CPS1P31327 1500 aa22.87■■□□□ 1.25
COPS9-205ENST00000607357 IQGAP3Q86VI3 1631 aa22.87■■□□□ 1.25
COPS9-205ENST00000607357 ADGRB3O60242 1522 aa22.86■■□□□ 1.25
COPS9-205ENST00000607357 E9PCH4 1651 aa22.84■■□□□ 1.25
COPS9-205ENST00000607357 IDI1Q13907 227 aa22.83■■□□□ 1.25
COPS9-205ENST00000607357 STAG3Q9UJ98 1225 aa22.83■■□□□ 1.25
COPS9-205ENST00000607357 TMEM2Q9UHN6 1383 aa22.83■■□□□ 1.25
COPS9-205ENST00000607357 LTKP29376 864 aa22.81■■□□□ 1.24
COPS9-205ENST00000607357 TXNDC2Q86VQ3 553 aa22.8■■□□□ 1.24
COPS9-205ENST00000607357 STRCP1A6NGW2 1772 aa22.8■■□□□ 1.24
COPS9-205ENST00000607357 SLC52A1Q9NWF4 448 aa22.79■■□□□ 1.24
COPS9-205ENST00000607357 EID1Q9Y6B2 187 aa22.79■■□□□ 1.24
COPS9-205ENST00000607357 NUP155O75694 1391 aa22.77■■□□□ 1.24
COPS9-205ENST00000607357 MYO5BQ9ULV0 1848 aa22.76■■□□□ 1.23
COPS9-205ENST00000607357 UBAP1LF5GYI3 381 aa22.75■■□□□ 1.23
COPS9-205ENST00000607357 TMEM131LA2VDJ0 1609 aa22.73■■□□□ 1.23
COPS9-205ENST00000607357 NAIPQ13075 1403 aa22.72■■□□□ 1.23
COPS9-205ENST00000607357 LRRC7Q96NW7 1537 aa22.71■■□□□ 1.23
COPS9-205ENST00000607357 ZFYVE9O95405 1425 aa22.69■■□□□ 1.22
COPS9-205ENST00000607357 SPHKAPQ2M3C7 1700 aa22.68■■□□□ 1.22
COPS9-205ENST00000607357 HFM1A2PYH4 1435 aa22.66■■□□□ 1.22
COPS9-205ENST00000607357 RIMS2Q9UQ26 1411 aa22.66■■□□□ 1.22
COPS9-205ENST00000607357 ALKQ9UM73 1620 aa22.64■■□□□ 1.21
COPS9-205ENST00000607357 TOM1O60784 492 aa22.63■■□□□ 1.21
COPS9-205ENST00000607357 XIRP1Q702N8 1843 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms