RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 FGD6Q6ZV73 1430 aa15.53■□□□□ 0.08
CTSA-215ENST00000607187 C3P01024 1663 aa15.53■□□□□ 0.08
CTSA-215ENST00000607187 DHX29Q7Z478 1369 aaKnown RBP15.52■□□□□ 0.08
CTSA-215ENST00000607187 TCOF1Q13428 1488 aaKnown RBP15.51■□□□□ 0.07
CTSA-215ENST00000607187 CNTLNQ9NXG0 1405 aa15.51■□□□□ 0.07
CTSA-215ENST00000607187 MROH2AA6NES4 1674 aa15.51■□□□□ 0.07
CTSA-215ENST00000607187 CROCC2H7BZ55 1655 aa15.51■□□□□ 0.07
CTSA-215ENST00000607187 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
CTSA-215ENST00000607187 ESF1Q9H501 851 aaKnown RBP15.5■□□□□ 0.07
CTSA-215ENST00000607187 DMRT2Q9Y5R5 561 aa15.5■□□□□ 0.07
CTSA-215ENST00000607187 LMTK3Q96Q04 1460 aa15.5■□□□□ 0.07
CTSA-215ENST00000607187 CEBPAP49715 358 aaPredicted RBP15.49■□□□□ 0.07
CTSA-215ENST00000607187 CLTCQ00610 1675 aaKnown RBP15.48■□□□□ 0.07
CTSA-215ENST00000607187 DNMT1P26358 1616 aaKnown RBP15.48■□□□□ 0.07
CTSA-215ENST00000607187 ABCC5O15440 1437 aa15.48■□□□□ 0.07
CTSA-215ENST00000607187 PREX1Q8TCU6 1659 aa15.48■□□□□ 0.07
CTSA-215ENST00000607187 GGT6Q6P531 493 aa15.47■□□□□ 0.07
CTSA-215ENST00000607187 SHANK2Q9UPX8 1470 aa15.46■□□□□ 0.07
CTSA-215ENST00000607187 DAPK1P53355 1430 aa15.45■□□□□ 0.06
CTSA-215ENST00000607187 ZMYM3Q14202 1370 aa15.45■□□□□ 0.06
CTSA-215ENST00000607187 KIF3BO15066 747 aa15.44■□□□□ 0.06
CTSA-215ENST00000607187 EIF2AK4Q9P2K8 1649 aaKnown RBP15.43■□□□□ 0.06
CTSA-215ENST00000607187 RNF17Q9BXT8 1623 aaKnown RBP15.42■□□□□ 0.06
CTSA-215ENST00000607187 DUOX2Q9NRD8 1548 aa15.42■□□□□ 0.06
CTSA-215ENST00000607187 FAM135AQ9P2D6 1515 aa15.42■□□□□ 0.06
CTSA-215ENST00000607187 NPATQ14207 1427 aa15.41■□□□□ 0.06
CTSA-215ENST00000607187 UHRF1BP1Q6BDS2 1440 aa15.4■□□□□ 0.06
CTSA-215ENST00000607187 KIF15Q9NS87 1388 aa15.39■□□□□ 0.05
CTSA-215ENST00000607187 KDM5DQ9BY66 1539 aa15.39■□□□□ 0.05
CTSA-215ENST00000607187 HSPA2P54652 639 aa15.39■□□□□ 0.05
CTSA-215ENST00000607187 FAM50AQ14320 339 aaKnown RBP15.39■□□□□ 0.05
CTSA-215ENST00000607187 RRP7BPQ9NSQ0 103 aa15.38■□□□□ 0.05
CTSA-215ENST00000607187 PTPRKQ15262 1439 aa15.37■□□□□ 0.05
CTSA-215ENST00000607187 MROH1Q8NDA8 1641 aa15.37■□□□□ 0.05
CTSA-215ENST00000607187 PPARGC1BQ86YN6 1023 aaKnown RBP15.37■□□□□ 0.05
CTSA-215ENST00000607187 ANKRD30AQ9BXX3 1397 aa15.36■□□□□ 0.05
CTSA-215ENST00000607187 NCOA1Q15788 1441 aa15.36■□□□□ 0.05
CTSA-215ENST00000607187 ERBINQ96RT1 1412 aa15.36■□□□□ 0.05
CTSA-215ENST00000607187 ADGRL2O95490 1459 aa15.36■□□□□ 0.05
CTSA-215ENST00000607187 CHIC2Q9UKJ5 165 aa15.36■□□□□ 0.05
CTSA-215ENST00000607187 WASHC2CQ9Y4E1 1318 aa15.36■□□□□ 0.05
CTSA-215ENST00000607187 ZC3H13Q5T200 1668 aaKnown RBP15.35■□□□□ 0.05
CTSA-215ENST00000607187 PZPP20742 1482 aa15.33■□□□□ 0.05
CTSA-215ENST00000607187 ABCC3O15438 1527 aa15.33■□□□□ 0.05
CTSA-215ENST00000607187 DEPDC5O75140 1603 aa15.33■□□□□ 0.04
CTSA-215ENST00000607187 MYO3AQ8NEV4 1616 aa15.33■□□□□ 0.04
CTSA-215ENST00000607187 CEP152O94986 1710 aa15.33■□□□□ 0.04
CTSA-215ENST00000607187 STRCQ7RTU9 1775 aa15.33■□□□□ 0.04
CTSA-215ENST00000607187 PRDM15P57071 1507 aaPredicted RBP15.33■□□□□ 0.04
CTSA-215ENST00000607187 ZNF142P52746 1687 aaPredicted RBP15.32■□□□□ 0.04
CTSA-215ENST00000607187 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.32■□□□□ 0.04
CTSA-215ENST00000607187 CFAP65Q6ZU64 1925 aaKnown RBP15.31■□□□□ 0.04
CTSA-215ENST00000607187 CAMSAP1Q5T5Y3 1602 aa15.29■□□□□ 0.04
CTSA-215ENST00000607187 CEP170BQ9Y4F5 1589 aaPredicted RBP15.29■□□□□ 0.04
CTSA-215ENST00000607187 FBXO31Q5XUX0 539 aaPredicted RBP15.29■□□□□ 0.04
CTSA-215ENST00000607187 RRBP1Q9P2E9 1410 aaKnown RBP15.27■□□□□ 0.04
CTSA-215ENST00000607187 ROCK1Q13464 1354 aa15.27■□□□□ 0.04
CTSA-215ENST00000607187 ANKRD50Q9ULJ7 1429 aa15.26■□□□□ 0.03
CTSA-215ENST00000607187 TNRQ92752 1358 aa15.26■□□□□ 0.03
CTSA-215ENST00000607187 VWDEQ8N2E2 1590 aa15.26■□□□□ 0.03
CTSA-215ENST00000607187 SPATA31D1Q6ZQQ2 1576 aa15.25■□□□□ 0.03
CTSA-215ENST00000607187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.03
CTSA-215ENST00000607187 A2ML1A8K2U0 1454 aa15.25■□□□□ 0.03
CTSA-215ENST00000607187 KANK1Q14678 1352 aa15.24■□□□□ 0.03
CTSA-215ENST00000607187 ARHGAP31Q2M1Z3 1444 aa15.24■□□□□ 0.03
CTSA-215ENST00000607187 LMTK2Q8IWU2 1503 aa15.23■□□□□ 0.03
CTSA-215ENST00000607187 ERVK-7P63135 1459 aa15.23■□□□□ 0.03
CTSA-215ENST00000607187 PLA2R1Q13018 1463 aa15.22■□□□□ 0.03
CTSA-215ENST00000607187 NLRP1Q9C000 1473 aa15.22■□□□□ 0.03
CTSA-215ENST00000607187 ITGAEP38570 1179 aa15.22■□□□□ 0.03
CTSA-215ENST00000607187 UNC13BO14795 1591 aa15.2■□□□□ 0.02
CTSA-215ENST00000607187 PTPRTO14522 1441 aa15.2■□□□□ 0.02
CTSA-215ENST00000607187 EFCAB6Q5THR3 1501 aa15.18■□□□□ 0.02
CTSA-215ENST00000607187 UGGT1Q9NYU2 1555 aa15.18■□□□□ 0.02
CTSA-215ENST00000607187 PKD2Q13563 968 aa15.17■□□□□ 0.02
CTSA-215ENST00000607187 POLR1AO95602 1720 aaPredicted RBP15.17■□□□□ 0.02
CTSA-215ENST00000607187 NCKAP5LQ9HCH0 1330 aa15.17■□□□□ 0.02
CTSA-215ENST00000607187 TET3O43151 1660 aa15.16■□□□□ 0.02
CTSA-215ENST00000607187 GCC2Q8IWJ2 1684 aa15.16■□□□□ 0.02
CTSA-215ENST00000607187 UBR1Q8IWV7 1749 aa15.15■□□□□ 0.02
CTSA-215ENST00000607187 THEMISQ8N1K5 641 aaPredicted RBP15.15■□□□□ 0.02
CTSA-215ENST00000607187 IQGAP3Q86VI3 1631 aa15.14■□□□□ 0.01
CTSA-215ENST00000607187 RPRD2Q5VT52 1461 aaKnown RBP15.14■□□□□ 0.01
CTSA-215ENST00000607187 NOS1P29475 1434 aa15.13■□□□□ 0.01
CTSA-215ENST00000607187 SYNMO15061 1565 aa15.12■□□□□ 0.01
CTSA-215ENST00000607187 NEURL4Q96JN8 1562 aa15.12■□□□□ 0.01
CTSA-215ENST00000607187 PIK3C2BO00750 1634 aa15.11■□□□□ 0.01
CTSA-215ENST00000607187 E9PCH4 1651 aa15.11■□□□□ 0.01
CTSA-215ENST00000607187 KDM5AP29375 1690 aaKnown RBP15.11■□□□□ 0.01
CTSA-215ENST00000607187 NAIPQ13075 1403 aa15.1■□□□□ 0.01
CTSA-215ENST00000607187 ILDR1Q86SU0 546 aaPredicted RBP15.1■□□□□ 0.01
CTSA-215ENST00000607187 ANKLE2Q86XL3 938 aa15.1■□□□□ 0.01
CTSA-215ENST00000607187 NUP155O75694 1391 aa15.1■□□□□ 0.01
CTSA-215ENST00000607187 CERKQ8TCT0 537 aa15.09■□□□□ 0.01
CTSA-215ENST00000607187 LTBP4Q8N2S1 1624 aa15.09■□□□□ 0.01
CTSA-215ENST00000607187 MED14O60244 1454 aa15.08■□□□□ 0.01
CTSA-215ENST00000607187 IDI1Q13907 227 aa15.08■□□□□ 0
CTSA-215ENST00000607187 HFM1A2PYH4 1435 aa15.08■□□□□ 0
CTSA-215ENST00000607187 ARHGAP23Q9P227 1491 aa15.07■□□□□ 0
CTSA-215ENST00000607187 SLIT1O75093 1534 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms