RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 CEP170BQ9Y4F5 1589 aaPredicted RBP34.46■■■■□ 3.11
TMEM248-207ENST00000607045 ZNF335Q9H4Z2 1342 aaPredicted RBP34.46■■■■□ 3.11
TMEM248-207ENST00000607045 MAP3K1Q13233 1512 aa34.44■■■■□ 3.1
TMEM248-207ENST00000607045 PLA2R1Q13018 1463 aa34.42■■■■□ 3.1
TMEM248-207ENST00000607045 TNRQ92752 1358 aa34.42■■■■□ 3.1
TMEM248-207ENST00000607045 A2ML1A8K2U0 1454 aa34.4■■■■□ 3.1
TMEM248-207ENST00000607045 TCOF1Q13428 1488 aaKnown RBP34.4■■■■□ 3.1
TMEM248-207ENST00000607045 MYOM3Q5VTT5 1437 aa34.39■■■■□ 3.1
TMEM248-207ENST00000607045 ZNF142P52746 1687 aaPredicted RBP34.39■■■■□ 3.1
TMEM248-207ENST00000607045 MIA2Q96PC5 1412 aa34.38■■■■□ 3.09
TMEM248-207ENST00000607045 KDM5DQ9BY66 1539 aa34.37■■■■□ 3.09
TMEM248-207ENST00000607045 PZPP20742 1482 aa34.37■■■■□ 3.09
TMEM248-207ENST00000607045 DNMT1P26358 1616 aaKnown RBP34.34■■■■□ 3.09
TMEM248-207ENST00000607045 APLP2Q06481 763 aa34.34■■■■□ 3.09
TMEM248-207ENST00000607045 MAST1Q9Y2H9 1570 aa34.28■■■■□ 3.08
TMEM248-207ENST00000607045 THEMISQ8N1K5 641 aaPredicted RBP34.28■■■■□ 3.08
TMEM248-207ENST00000607045 FAM135AQ9P2D6 1515 aa34.28■■■■□ 3.08
TMEM248-207ENST00000607045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.27■■■■□ 3.08
TMEM248-207ENST00000607045 IQSEC2Q5JU85 1478 aa34.27■■■■□ 3.08
TMEM248-207ENST00000607045 ANKLE2Q86XL3 938 aa34.26■■■■□ 3.08
TMEM248-207ENST00000607045 RRP7BPQ9NSQ0 103 aa34.25■■■■□ 3.07
TMEM248-207ENST00000607045 UBAP1LF5GYI3 381 aa34.24■■■■□ 3.07
TMEM248-207ENST00000607045 ABCC5O15440 1437 aa34.21■■■■□ 3.07
TMEM248-207ENST00000607045 ABCC3O15438 1527 aa34.2■■■■□ 3.07
TMEM248-207ENST00000607045 NLRP1Q9C000 1473 aa34.18■■■■□ 3.06
TMEM248-207ENST00000607045 RNF17Q9BXT8 1623 aaKnown RBP34.18■■■■□ 3.06
TMEM248-207ENST00000607045 KIF15Q9NS87 1388 aa34.16■■■■□ 3.06
TMEM248-207ENST00000607045 DISP3Q9P2K9 1392 aa34.15■■■■□ 3.06
TMEM248-207ENST00000607045 CHIC2Q9UKJ5 165 aa34.15■■■■□ 3.06
TMEM248-207ENST00000607045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.14■■■■□ 3.06
TMEM248-207ENST00000607045 UGGT1Q9NYU2 1555 aa34.14■■■■□ 3.06
TMEM248-207ENST00000607045 DUOX2Q9NRD8 1548 aa34.14■■■■□ 3.06
TMEM248-207ENST00000607045 NEURL4Q96JN8 1562 aa34.13■■■■□ 3.05
TMEM248-207ENST00000607045 MROH1Q8NDA8 1641 aa34.12■■■■□ 3.05
TMEM248-207ENST00000607045 PTPN23Q9H3S7 1636 aa34.11■■■■□ 3.05
TMEM248-207ENST00000607045 EIF2AK4Q9P2K8 1649 aaKnown RBP34.1■■■■□ 3.05
TMEM248-207ENST00000607045 FGD6Q6ZV73 1430 aa34.09■■■■□ 3.05
TMEM248-207ENST00000607045 ERVK-7P63135 1459 aa34.08■■■■□ 3.05
TMEM248-207ENST00000607045 DAPK1P53355 1430 aa34.08■■■■□ 3.05
TMEM248-207ENST00000607045 ILDR2Q71H61 639 aa34.08■■■■□ 3.05
TMEM248-207ENST00000607045 SPATA31D1Q6ZQQ2 1576 aa34.07■■■■□ 3.05
TMEM248-207ENST00000607045 SHANK2Q9UPX8 1470 aa34.07■■■■□ 3.04
TMEM248-207ENST00000607045 NPHP4O75161 1426 aaPredicted RBP34.06■■■■□ 3.04
TMEM248-207ENST00000607045 CFAP65Q6ZU64 1925 aaKnown RBP34.04■■■■□ 3.04
TMEM248-207ENST00000607045 POLR1AO95602 1720 aaPredicted RBP34.03■■■■□ 3.04
TMEM248-207ENST00000607045 ZC3H13Q5T200 1668 aaKnown RBP34.03■■■■□ 3.04
TMEM248-207ENST00000607045 MED14O60244 1454 aa34.02■■■■□ 3.04
TMEM248-207ENST00000607045 ERBINQ96RT1 1412 aa34.02■■■■□ 3.04
TMEM248-207ENST00000607045 CEP152O94986 1710 aa34.01■■■■□ 3.03
TMEM248-207ENST00000607045 PIP4K2BP78356 416 aa33.98■■■■□ 3.03
TMEM248-207ENST00000607045 ANKRD30AQ9BXX3 1397 aa33.98■■■■□ 3.03
TMEM248-207ENST00000607045 ARHGAP31Q2M1Z3 1444 aa33.97■■■■□ 3.03
TMEM248-207ENST00000607045 LTKP29376 864 aa33.97■■■■□ 3.03
TMEM248-207ENST00000607045 FAM50AQ14320 339 aaKnown RBP33.96■■■■□ 3.03
TMEM248-207ENST00000607045 VWDEQ8N2E2 1590 aa33.96■■■■□ 3.03
TMEM248-207ENST00000607045 SCAF1Q9H7N4 1312 aaKnown RBP33.96■■■■□ 3.03
TMEM248-207ENST00000607045 CPS1P31327 1500 aa33.95■■■■□ 3.03
TMEM248-207ENST00000607045 DEPDC5O75140 1603 aa33.95■■■■□ 3.03
TMEM248-207ENST00000607045 TOM1O60784 492 aa33.95■■■■□ 3.03
TMEM248-207ENST00000607045 CROCC2H7BZ55 1655 aa33.95■■■■□ 3.03
TMEM248-207ENST00000607045 TXNDC2Q86VQ3 553 aa33.94■■■■□ 3.02
TMEM248-207ENST00000607045 PRDM15P57071 1507 aaPredicted RBP33.93■■■■□ 3.02
TMEM248-207ENST00000607045 KANK1Q14678 1352 aa33.92■■■■□ 3.02
TMEM248-207ENST00000607045 HSPA1LP34931 641 aa33.9■■■■□ 3.02
TMEM248-207ENST00000607045 IDI1Q13907 227 aa33.88■■■■□ 3.01
TMEM248-207ENST00000607045 IQGAP1P46940 1657 aa33.86■■■■□ 3.01
TMEM248-207ENST00000607045 UBR1Q8IWV7 1749 aa33.85■■■■□ 3.01
TMEM248-207ENST00000607045 STAG3Q9UJ98 1225 aa33.84■■■■□ 3.01
TMEM248-207ENST00000607045 EID1Q9Y6B2 187 aa33.83■■■■□ 3.01
TMEM248-207ENST00000607045 SCAF11Q99590 1463 aaKnown RBP33.82■■■■□ 3.01
TMEM248-207ENST00000607045 ARHGAP23Q9P227 1491 aa33.82■■■■□ 3
TMEM248-207ENST00000607045 SLIT1O75093 1534 aa33.79■■■■□ 3
TMEM248-207ENST00000607045 LRRC7Q96NW7 1537 aa33.78■■■■□ 3
TMEM248-207ENST00000607045 ADGRL2O95490 1459 aa33.77■■■■□ 3
TMEM248-207ENST00000607045 TMEM2Q9UHN6 1383 aa33.77■■■■□ 3
TMEM248-207ENST00000607045 LMTK2Q8IWU2 1503 aa33.77■■■■□ 3
TMEM248-207ENST00000607045 STRCP1A6NGW2 1772 aa33.77■■■■□ 3
TMEM248-207ENST00000607045 SOCS7O14512 581 aa33.76■■■□□ 2.99
TMEM248-207ENST00000607045 ANKRD50Q9ULJ7 1429 aa33.73■■■□□ 2.99
TMEM248-207ENST00000607045 PIK3C2BO00750 1634 aa33.73■■■□□ 2.99
TMEM248-207ENST00000607045 ALKQ9UM73 1620 aa33.72■■■□□ 2.99
TMEM248-207ENST00000607045 NOS1P29475 1434 aa33.7■■■□□ 2.99
TMEM248-207ENST00000607045 PPARGC1BQ86YN6 1023 aaKnown RBP33.7■■■□□ 2.99
TMEM248-207ENST00000607045 SENP3Q9H4L4 574 aaPredicted RBP33.7■■■□□ 2.99
TMEM248-207ENST00000607045 SLC52A1Q9NWF4 448 aa33.68■■■□□ 2.98
TMEM248-207ENST00000607045 SLC26A8Q96RN1 970 aa33.67■■■□□ 2.98
TMEM248-207ENST00000607045 SYNMO15061 1565 aa33.66■■■□□ 2.98
TMEM248-207ENST00000607045 EFCAB6Q5THR3 1501 aa33.64■■■□□ 2.98
TMEM248-207ENST00000607045 ITGAEP38570 1179 aa33.6■■■□□ 2.97
TMEM248-207ENST00000607045 KCNA6P17658 529 aa33.58■■■□□ 2.97
TMEM248-207ENST00000607045 RBM33Q96EV2 1170 aaKnown RBP33.57■■■□□ 2.96
TMEM248-207ENST00000607045 BCANQ96GW7 911 aa33.56■■■□□ 2.96
TMEM248-207ENST00000607045 TET3O43151 1660 aa33.53■■■□□ 2.96
TMEM248-207ENST00000607045 KDM5AP29375 1690 aaKnown RBP33.52■■■□□ 2.96
TMEM248-207ENST00000607045 RPRD2Q5VT52 1461 aaKnown RBP33.52■■■□□ 2.96
TMEM248-207ENST00000607045 PROSER2Q86WR7 435 aaPredicted RBP33.52■■■□□ 2.96
TMEM248-207ENST00000607045 TMEM94Q12767 1356 aa33.51■■■□□ 2.96
TMEM248-207ENST00000607045 ROCK1Q13464 1354 aa33.51■■■□□ 2.96
TMEM248-207ENST00000607045 ADGRB3O60242 1522 aa33.5■■■□□ 2.95
TMEM248-207ENST00000607045 CHGAP10645 457 aaKnown RBP33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms