RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 STRCQ7RTU9 1775 aa19.16■□□□□ 0.66
CTSA-210ENST00000606000 MROH1Q8NDA8 1641 aa19.16■□□□□ 0.66
CTSA-210ENST00000606000 PTPRKQ15262 1439 aa19.16■□□□□ 0.66
CTSA-210ENST00000606000 SETD1BQ9UPS6 1966 aaKnown RBP19.15■□□□□ 0.66
CTSA-210ENST00000606000 NPATQ14207 1427 aa19.15■□□□□ 0.66
CTSA-210ENST00000606000 DUOX2Q9NRD8 1548 aa19.14■□□□□ 0.65
CTSA-210ENST00000606000 PPARGC1BQ86YN6 1023 aaKnown RBP19.13■□□□□ 0.65
CTSA-210ENST00000606000 CEP152O94986 1710 aa19.12■□□□□ 0.65
CTSA-210ENST00000606000 ZNF142P52746 1687 aaPredicted RBP19.12■□□□□ 0.65
CTSA-210ENST00000606000 PHF23Q9BUL5 403 aaPredicted RBP19.12■□□□□ 0.65
CTSA-210ENST00000606000 FAM135AQ9P2D6 1515 aa19.11■□□□□ 0.65
CTSA-210ENST00000606000 KIF15Q9NS87 1388 aa19.11■□□□□ 0.65
CTSA-210ENST00000606000 PPP6R1Q9UPN7 881 aa19.1■□□□□ 0.65
CTSA-210ENST00000606000 ZC3H13Q5T200 1668 aaKnown RBP19.1■□□□□ 0.65
CTSA-210ENST00000606000 ABCC3O15438 1527 aa19.1■□□□□ 0.65
CTSA-210ENST00000606000 RRP7BPQ9NSQ0 103 aa19.09■□□□□ 0.65
CTSA-210ENST00000606000 CHIC2Q9UKJ5 165 aa19.09■□□□□ 0.65
CTSA-210ENST00000606000 CEP170BQ9Y4F5 1589 aaPredicted RBP19.09■□□□□ 0.65
CTSA-210ENST00000606000 FAM50AQ14320 339 aaKnown RBP19.08■□□□□ 0.64
CTSA-210ENST00000606000 PZPP20742 1482 aa19.08■□□□□ 0.64
CTSA-210ENST00000606000 CAMSAP1Q5T5Y3 1602 aa19.07■□□□□ 0.64
CTSA-210ENST00000606000 WASHC2CQ9Y4E1 1318 aa19.07■□□□□ 0.64
CTSA-210ENST00000606000 PRDM15P57071 1507 aaPredicted RBP19.06■□□□□ 0.64
CTSA-210ENST00000606000 FBXO31Q5XUX0 539 aaPredicted RBP19.06■□□□□ 0.64
CTSA-210ENST00000606000 DEPDC5O75140 1603 aa19.06■□□□□ 0.64
CTSA-210ENST00000606000 ERBINQ96RT1 1412 aa19.06■□□□□ 0.64
CTSA-210ENST00000606000 NCOA1Q15788 1441 aa19.04■□□□□ 0.64
CTSA-210ENST00000606000 ADGRL2O95490 1459 aa19.03■□□□□ 0.64
CTSA-210ENST00000606000 ANKRD30AQ9BXX3 1397 aa19.03■□□□□ 0.64
CTSA-210ENST00000606000 ILDR1Q86SU0 546 aaPredicted RBP19.02■□□□□ 0.64
CTSA-210ENST00000606000 TNRQ92752 1358 aa19.01■□□□□ 0.63
CTSA-210ENST00000606000 A2ML1A8K2U0 1454 aa19■□□□□ 0.63
CTSA-210ENST00000606000 SPATA31D1Q6ZQQ2 1576 aa18.99■□□□□ 0.63
CTSA-210ENST00000606000 ERVK-7P63135 1459 aa18.97■□□□□ 0.63
CTSA-210ENST00000606000 CFAP65Q6ZU64 1925 aaKnown RBP18.96■□□□□ 0.63
CTSA-210ENST00000606000 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.96■□□□□ 0.63
CTSA-210ENST00000606000 NCKAP5LQ9HCH0 1330 aa18.96■□□□□ 0.63
CTSA-210ENST00000606000 PLA2R1Q13018 1463 aa18.96■□□□□ 0.63
CTSA-210ENST00000606000 VWDEQ8N2E2 1590 aa18.95■□□□□ 0.62
CTSA-210ENST00000606000 PTPRTO14522 1441 aa18.95■□□□□ 0.62
CTSA-210ENST00000606000 POLR1AO95602 1720 aaPredicted RBP18.94■□□□□ 0.62
CTSA-210ENST00000606000 ANKRD50Q9ULJ7 1429 aa18.92■□□□□ 0.62
CTSA-210ENST00000606000 NLRP1Q9C000 1473 aa18.92■□□□□ 0.62
CTSA-210ENST00000606000 NEURL4Q96JN8 1562 aa18.91■□□□□ 0.62
CTSA-210ENST00000606000 UGGT1Q9NYU2 1555 aa18.91■□□□□ 0.62
CTSA-210ENST00000606000 ITGAEP38570 1179 aa18.91■□□□□ 0.62
CTSA-210ENST00000606000 DMRT2Q9Y5R5 561 aa18.91■□□□□ 0.62
CTSA-210ENST00000606000 LMTK2Q8IWU2 1503 aa18.9■□□□□ 0.62
CTSA-210ENST00000606000 UNC13BO14795 1591 aa18.89■□□□□ 0.62
CTSA-210ENST00000606000 KANK1Q14678 1352 aa18.89■□□□□ 0.61
CTSA-210ENST00000606000 ARHGAP31Q2M1Z3 1444 aa18.89■□□□□ 0.61
CTSA-210ENST00000606000 EFCAB6Q5THR3 1501 aa18.89■□□□□ 0.61
CTSA-210ENST00000606000 UBR1Q8IWV7 1749 aa18.88■□□□□ 0.61
CTSA-210ENST00000606000 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.88■□□□□ 0.61
CTSA-210ENST00000606000 LTBP4Q8N2S1 1624 aa18.88■□□□□ 0.61
CTSA-210ENST00000606000 RRBP1Q9P2E9 1410 aaKnown RBP18.87■□□□□ 0.61
CTSA-210ENST00000606000 SYNMO15061 1565 aa18.86■□□□□ 0.61
CTSA-210ENST00000606000 ROCK1Q13464 1354 aa18.86■□□□□ 0.61
CTSA-210ENST00000606000 CERKQ8TCT0 537 aa18.86■□□□□ 0.61
CTSA-210ENST00000606000 PIK3C2BO00750 1634 aa18.85■□□□□ 0.61
CTSA-210ENST00000606000 FBXO41Q8TF61 875 aa18.85■□□□□ 0.61
CTSA-210ENST00000606000 PKD2Q13563 968 aa18.84■□□□□ 0.61
CTSA-210ENST00000606000 TET3O43151 1660 aa18.84■□□□□ 0.61
CTSA-210ENST00000606000 GCC2Q8IWJ2 1684 aa18.82■□□□□ 0.6
CTSA-210ENST00000606000 ZNF335Q9H4Z2 1342 aaPredicted RBP18.81■□□□□ 0.6
CTSA-210ENST00000606000 IQGAP3Q86VI3 1631 aa18.81■□□□□ 0.6
CTSA-210ENST00000606000 E9PCH4 1651 aa18.79■□□□□ 0.6
CTSA-210ENST00000606000 IQGAP1P46940 1657 aa18.79■□□□□ 0.6
CTSA-210ENST00000606000 THEMISQ8N1K5 641 aaPredicted RBP18.79■□□□□ 0.6
CTSA-210ENST00000606000 NOS1P29475 1434 aa18.79■□□□□ 0.6
CTSA-210ENST00000606000 NPHP4O75161 1426 aaPredicted RBP18.76■□□□□ 0.59
CTSA-210ENST00000606000 MED14O60244 1454 aa18.76■□□□□ 0.59
CTSA-210ENST00000606000 SLIT1O75093 1534 aa18.75■□□□□ 0.59
CTSA-210ENST00000606000 ANKLE2Q86XL3 938 aa18.75■□□□□ 0.59
CTSA-210ENST00000606000 RPRD2Q5VT52 1461 aaKnown RBP18.75■□□□□ 0.59
CTSA-210ENST00000606000 ARHGAP23Q9P227 1491 aa18.75■□□□□ 0.59
CTSA-210ENST00000606000 ADGRB3O60242 1522 aa18.74■□□□□ 0.59
CTSA-210ENST00000606000 KDM5AP29375 1690 aaKnown RBP18.74■□□□□ 0.59
CTSA-210ENST00000606000 MYO5BQ9ULV0 1848 aa18.74■□□□□ 0.59
CTSA-210ENST00000606000 SCAF11Q99590 1463 aaKnown RBP18.72■□□□□ 0.59
CTSA-210ENST00000606000 IDI1Q13907 227 aa18.72■□□□□ 0.59
CTSA-210ENST00000606000 NUP155O75694 1391 aa18.71■□□□□ 0.59
CTSA-210ENST00000606000 STRCP1A6NGW2 1772 aa18.71■□□□□ 0.59
CTSA-210ENST00000606000 NAIPQ13075 1403 aa18.71■□□□□ 0.59
CTSA-210ENST00000606000 LTKP29376 864 aa18.69■□□□□ 0.58
CTSA-210ENST00000606000 TMEM2Q9UHN6 1383 aa18.68■□□□□ 0.58
CTSA-210ENST00000606000 IQSEC2Q5JU85 1478 aa18.68■□□□□ 0.58
CTSA-210ENST00000606000 TMEM131LA2VDJ0 1609 aa18.67■□□□□ 0.58
CTSA-210ENST00000606000 STAG3Q9UJ98 1225 aa18.67■□□□□ 0.58
CTSA-210ENST00000606000 TXNDC2Q86VQ3 553 aa18.66■□□□□ 0.58
CTSA-210ENST00000606000 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
CTSA-210ENST00000606000 HFM1A2PYH4 1435 aa18.65■□□□□ 0.58
CTSA-210ENST00000606000 CPS1P31327 1500 aa18.64■□□□□ 0.58
CTSA-210ENST00000606000 SLC52A1Q9NWF4 448 aa18.63■□□□□ 0.57
CTSA-210ENST00000606000 ZFYVE9O95405 1425 aa18.6■□□□□ 0.57
CTSA-210ENST00000606000 EID1Q9Y6B2 187 aa18.6■□□□□ 0.57
CTSA-210ENST00000606000 CHGAP10645 457 aaKnown RBP18.58■□□□□ 0.56
CTSA-210ENST00000606000 RIMS2Q9UQ26 1411 aa18.57■□□□□ 0.56
CTSA-210ENST00000606000 CLTCL1P53675 1640 aa18.57■□□□□ 0.56
CTSA-210ENST00000606000 LRRC7Q96NW7 1537 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms