RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 YTHDC1Q96MU7 727 aaKnown RBP7.8□□□□□ -1.16
COL4A3BP-207ENST00000604926 EXOC8Q8IYI6 725 aa7.79□□□□□ -1.16
COL4A3BP-207ENST00000604926 ZMYM4Q5VZL5 1548 aa7.79□□□□□ -1.16
COL4A3BP-207ENST00000604926 ZNF622Q969S3 477 aaKnown RBP eCLIP7.79□□□□□ -1.16
COL4A3BP-207ENST00000604926 PHLDB1Q86UU1 1377 aa7.79□□□□□ -1.16
COL4A3BP-207ENST00000604926 HSP90AB4PQ58FF6 505 aa7.79□□□□□ -1.16
COL4A3BP-207ENST00000604926 SLC52A1Q9NWF4 448 aa7.79□□□□□ -1.16
COL4A3BP-207ENST00000604926 PKD2Q13563 968 aa7.78□□□□□ -1.16
COL4A3BP-207ENST00000604926 TMCO4Q5TGY1 634 aa7.78□□□□□ -1.16
COL4A3BP-207ENST00000604926 HDAC5Q9UQL6 1122 aa7.78□□□□□ -1.16
COL4A3BP-207ENST00000604926 ADCY10Q96PN6 1610 aa7.78□□□□□ -1.16
COL4A3BP-207ENST00000604926 POLA1P09884 1462 aaPredicted RBP7.78□□□□□ -1.16
COL4A3BP-207ENST00000604926 PCGF6Q9BYE7 350 aa7.78□□□□□ -1.16
COL4A3BP-207ENST00000604926 HECW2Q9P2P5 1572 aa7.77□□□□□ -1.17
COL4A3BP-207ENST00000604926 EPRSP07814 1512 aaKnown RBP7.77□□□□□ -1.17
COL4A3BP-207ENST00000604926 MYCNP04198 464 aaPredicted RBP7.77□□□□□ -1.17
COL4A3BP-207ENST00000604926 RGS3P49796 1198 aa7.77□□□□□ -1.17
COL4A3BP-207ENST00000604926 NEUROD2Q15784 382 aa7.77□□□□□ -1.17
COL4A3BP-207ENST00000604926 FER1L4A9Z1Z3 1794 aa7.76□□□□□ -1.17
COL4A3BP-207ENST00000604926 E9PSI1 815 aa7.76□□□□□ -1.17
COL4A3BP-207ENST00000604926 RRP9O43818 475 aaKnown RBP7.76□□□□□ -1.17
COL4A3BP-207ENST00000604926 MMP14P50281 582 aa7.76□□□□□ -1.17
COL4A3BP-207ENST00000604926 MSH5O43196 834 aa7.76□□□□□ -1.17
COL4A3BP-207ENST00000604926 LMTK3Q96Q04 1460 aa7.76□□□□□ -1.17
COL4A3BP-207ENST00000604926 ZNF142P52746 1687 aaPredicted RBP7.76□□□□□ -1.17
COL4A3BP-207ENST00000604926 MAGI3Q5TCQ9 1506 aa7.75□□□□□ -1.17
COL4A3BP-207ENST00000604926 CCDC125Q86Z20 511 aa7.75□□□□□ -1.17
COL4A3BP-207ENST00000604926 RIPOR2Q9Y4F9 1068 aa7.74□□□□□ -1.17
COL4A3BP-207ENST00000604926 APPP05067 770 aa7.74□□□□□ -1.17
COL4A3BP-207ENST00000604926 HSP90AA2PQ14568 343 aaPredicted RBP7.74□□□□□ -1.17
COL4A3BP-207ENST00000604926 CUX1P39880 1505 aa7.74□□□□□ -1.17
COL4A3BP-207ENST00000604926 SH3BP1Q9Y3L3 701 aa7.73□□□□□ -1.17
COL4A3BP-207ENST00000604926 GZF1Q9H116 711 aaPredicted RBP7.73□□□□□ -1.17
COL4A3BP-207ENST00000604926 UGGT2Q9NYU1 1516 aa7.73□□□□□ -1.17
COL4A3BP-207ENST00000604926 SMARCA5O60264 1052 aaPredicted RBP7.72□□□□□ -1.17
COL4A3BP-207ENST00000604926 ABCA9Q8IUA7 1624 aa7.72□□□□□ -1.17
COL4A3BP-207ENST00000604926 IRX3P78415 501 aaPredicted RBP7.71□□□□□ -1.17
COL4A3BP-207ENST00000604926 MAPK8IP2Q13387 824 aaPredicted RBP7.71□□□□□ -1.17
COL4A3BP-207ENST00000604926 SPTY2D1Q68D10 685 aaPredicted RBP7.71□□□□□ -1.17
COL4A3BP-207ENST00000604926 CCDC82Q8N4S0 544 aa7.71□□□□□ -1.18
COL4A3BP-207ENST00000604926 CALD1Q05682 793 aaKnown RBP7.71□□□□□ -1.18
COL4A3BP-207ENST00000604926 GAPVD1Q14C86 1478 aa7.7□□□□□ -1.18
COL4A3BP-207ENST00000604926 VGFO15240 615 aaPredicted RBP7.7□□□□□ -1.18
COL4A3BP-207ENST00000604926 NOL8Q76FK4 1167 aaKnown RBP7.7□□□□□ -1.18
COL4A3BP-207ENST00000604926 TTC37Q6PGP7 1564 aa7.7□□□□□ -1.18
COL4A3BP-207ENST00000604926 GRIN2AQ12879 1464 aa7.7□□□□□ -1.18
COL4A3BP-207ENST00000604926 MPNDQ8N594 471 aa7.7□□□□□ -1.18
COL4A3BP-207ENST00000604926 KDM5AP29375 1690 aaKnown RBP7.7□□□□□ -1.18
COL4A3BP-207ENST00000604926 TMEM51Q9NW97 253 aa7.7□□□□□ -1.18
COL4A3BP-207ENST00000604926 TEX14Q8IWB6 1497 aa7.69□□□□□ -1.18
COL4A3BP-207ENST00000604926 SNAPC4Q5SXM2 1469 aa7.69□□□□□ -1.18
COL4A3BP-207ENST00000604926 VGLL3A8MV65 326 aa7.69□□□□□ -1.18
COL4A3BP-207ENST00000604926 CCDC88BA6NC98 1476 aa7.68□□□□□ -1.18
COL4A3BP-207ENST00000604926 PSEN1P49768 467 aa7.68□□□□□ -1.18
COL4A3BP-207ENST00000604926 AXDND1Q5T1B0 1012 aaPredicted RBP7.68□□□□□ -1.18
COL4A3BP-207ENST00000604926 PREX1Q8TCU6 1659 aa7.68□□□□□ -1.18
COL4A3BP-207ENST00000604926 SPRYD3Q8NCJ5 442 aa7.67□□□□□ -1.18
COL4A3BP-207ENST00000604926 RBM19Q9Y4C8 960 aaKnown RBP7.67□□□□□ -1.18
COL4A3BP-207ENST00000604926 SPINK5Q9NQ38 1064 aaPredicted RBP7.67□□□□□ -1.18
COL4A3BP-207ENST00000604926 RINLQ6ZS11 566 aa7.66□□□□□ -1.18
COL4A3BP-207ENST00000604926 PCF11O94913 1555 aaKnown RBP7.65□□□□□ -1.18
COL4A3BP-207ENST00000604926 SAMD9Q5K651 1589 aa7.65□□□□□ -1.18
COL4A3BP-207ENST00000604926 APBB1IPQ7Z5R6 666 aaPredicted RBP7.65□□□□□ -1.18
COL4A3BP-207ENST00000604926 SEMA3FQ13275 785 aa7.65□□□□□ -1.19
COL4A3BP-207ENST00000604926 RICTORQ6R327 1708 aa7.65□□□□□ -1.19
COL4A3BP-207ENST00000604926 EVI5LQ96CN4 794 aa7.64□□□□□ -1.19
COL4A3BP-207ENST00000604926 IRF6O14896 467 aa7.63□□□□□ -1.19
COL4A3BP-207ENST00000604926 EGFL6Q8IUX8 553 aa7.63□□□□□ -1.19
COL4A3BP-207ENST00000604926 FHAD1B1AJZ9 1412 aa7.63□□□□□ -1.19
COL4A3BP-207ENST00000604926 PLB1Q6P1J6 1458 aa7.63□□□□□ -1.19
COL4A3BP-207ENST00000604926 MARCH6O60337 910 aa7.63□□□□□ -1.19
COL4A3BP-207ENST00000604926 GPBP1L1Q9HC44 474 aaPredicted RBP7.63□□□□□ -1.19
COL4A3BP-207ENST00000604926 ABCA8O94911 1581 aa7.63□□□□□ -1.19
COL4A3BP-207ENST00000604926 SPATA31D1Q6ZQQ2 1576 aa7.62□□□□□ -1.19
COL4A3BP-207ENST00000604926 TTC36A6NLP5 189 aa7.62□□□□□ -1.19
COL4A3BP-207ENST00000604926 NBPF11Q86T75 865 aa7.62□□□□□ -1.19
COL4A3BP-207ENST00000604926 SUPT16HQ9Y5B9 1047 aaKnown RBP7.62□□□□□ -1.19
COL4A3BP-207ENST00000604926 NME8Q8N427 588 aa7.62□□□□□ -1.19
COL4A3BP-207ENST00000604926 NBPF1Q3BBV0 1214 aa7.62□□□□□ -1.19
COL4A3BP-207ENST00000604926 ARMCX6Q7L4S7 300 aa7.62□□□□□ -1.19
COL4A3BP-207ENST00000604926 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.62□□□□□ -1.19
COL4A3BP-207ENST00000604926 CARD10Q9BWT7 1032 aa7.62□□□□□ -1.19
COL4A3BP-207ENST00000604926 TERF2IPQ9NYB0 399 aa7.62□□□□□ -1.19
COL4A3BP-207ENST00000604926 RBM27Q9P2N5 1060 aaKnown RBP7.62□□□□□ -1.19
COL4A3BP-207ENST00000604926 CCDC96Q2M329 555 aa7.61□□□□□ -1.19
COL4A3BP-207ENST00000604926 RGL3Q3MIN7 710 aa7.61□□□□□ -1.19
COL4A3BP-207ENST00000604926 FOXD4L1Q9NU39 408 aa7.61□□□□□ -1.19
COL4A3BP-207ENST00000604926 TSHZ1Q6ZSZ6 1077 aa7.61□□□□□ -1.19
COL4A3BP-207ENST00000604926 STK24Q9Y6E0 443 aa7.61□□□□□ -1.19
COL4A3BP-207ENST00000604926 ZCCHC11Q5TAX3 1644 aaKnown RBP7.61□□□□□ -1.19
COL4A3BP-207ENST00000604926 FRMPD1Q5SYB0 1578 aa7.6□□□□□ -1.19
COL4A3BP-207ENST00000604926 POLD1P28340 1107 aa7.6□□□□□ -1.19
COL4A3BP-207ENST00000604926 FOXD4Q12950 439 aaPredicted RBP7.6□□□□□ -1.19
COL4A3BP-207ENST00000604926 NBPF20Q3BBV1 942 aa7.6□□□□□ -1.19
COL4A3BP-207ENST00000604926 PPME1Q9Y570 386 aa7.6□□□□□ -1.19
COL4A3BP-207ENST00000604926 RBM26Q5T8P6 1007 aaKnown RBP7.6□□□□□ -1.19
COL4A3BP-207ENST00000604926 C11orf95C9JLR9 678 aaPredicted RBP7.59□□□□□ -1.19
COL4A3BP-207ENST00000604926 TPD52L2O43399 206 aaKnown RBP7.59□□□□□ -1.19
COL4A3BP-207ENST00000604926 FBXO41Q8TF61 875 aa7.59□□□□□ -1.19
COL4A3BP-207ENST00000604926 ABCC2Q92887 1545 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms