RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 ABCA6Q8N139 1617 aa11.84□□□□□ -0.51
NOLC1-208ENST00000603946 MLH3Q9UHC1 1453 aa11.83□□□□□ -0.52
NOLC1-208ENST00000603946 ATP10AO60312 1499 aa11.82□□□□□ -0.52
NOLC1-208ENST00000603946 HECW2Q9P2P5 1572 aa11.82□□□□□ -0.52
NOLC1-208ENST00000603946 SIGLEC1Q9BZZ2 1709 aa11.81□□□□□ -0.52
NOLC1-208ENST00000603946 RTEL1-TNFRSF6BF6WH68 1400 aa11.81□□□□□ -0.52
NOLC1-208ENST00000603946 STAG3Q9UJ98 1225 aa11.81□□□□□ -0.52
NOLC1-208ENST00000603946 ADGRL2O95490 1459 aa11.81□□□□□ -0.52
NOLC1-208ENST00000603946 DIP2CQ9Y2E4 1556 aa11.8□□□□□ -0.52
NOLC1-208ENST00000603946 CROCC2H7BZ55 1655 aa11.8□□□□□ -0.52
NOLC1-208ENST00000603946 SHANK2Q9UPX8 1470 aa11.8□□□□□ -0.52
NOLC1-208ENST00000603946 KDM5CP41229 1560 aa11.8□□□□□ -0.52
NOLC1-208ENST00000603946 CFAP74Q9C0B2 1584 aa11.79□□□□□ -0.52
NOLC1-208ENST00000603946 DUOX2Q9NRD8 1548 aa11.79□□□□□ -0.52
NOLC1-208ENST00000603946 KANK1Q14678 1352 aa11.79□□□□□ -0.52
NOLC1-208ENST00000603946 INO80Q9ULG1 1556 aaPredicted RBP11.78□□□□□ -0.52
NOLC1-208ENST00000603946 DCAF11Q8TEB1 546 aa11.78□□□□□ -0.52
NOLC1-208ENST00000603946 DAXXQ9UER7 740 aaPredicted RBP11.78□□□□□ -0.52
NOLC1-208ENST00000603946 PZPP20742 1482 aa11.78□□□□□ -0.52
NOLC1-208ENST00000603946 IDI1Q13907 227 aa11.78□□□□□ -0.52
NOLC1-208ENST00000603946 L3MBTL2Q969R5 705 aa11.77□□□□□ -0.52
NOLC1-208ENST00000603946 HRCP23327 699 aa11.77□□□□□ -0.53
NOLC1-208ENST00000603946 BCANQ96GW7 911 aa11.77□□□□□ -0.53
NOLC1-208ENST00000603946 KDM4FA0A1W2PPD8 638 aa11.76□□□□□ -0.53
NOLC1-208ENST00000603946 ZMYM3Q14202 1370 aa11.76□□□□□ -0.53
NOLC1-208ENST00000603946 ADGBQ8N7X0 1667 aa11.75□□□□□ -0.53
NOLC1-208ENST00000603946 HSPA2P54652 639 aa11.75□□□□□ -0.53
NOLC1-208ENST00000603946 UGGT1Q9NYU2 1555 aa11.75□□□□□ -0.53
NOLC1-208ENST00000603946 FAM135AQ9P2D6 1515 aa11.75□□□□□ -0.53
NOLC1-208ENST00000603946 ERBINQ96RT1 1412 aa11.74□□□□□ -0.53
NOLC1-208ENST00000603946 MAST1Q9Y2H9 1570 aa11.72□□□□□ -0.53
NOLC1-208ENST00000603946 NPATQ14207 1427 aa11.72□□□□□ -0.53
NOLC1-208ENST00000603946 GCC2Q8IWJ2 1684 aa11.72□□□□□ -0.53
NOLC1-208ENST00000603946 TONSLQ96HA7 1378 aa11.71□□□□□ -0.53
NOLC1-208ENST00000603946 ANKRD30BQ9BXX2 1392 aa11.71□□□□□ -0.53
NOLC1-208ENST00000603946 PLXNC1O60486 1568 aa11.71□□□□□ -0.53
NOLC1-208ENST00000603946 MAGI2Q86UL8 1455 aa11.71□□□□□ -0.54
NOLC1-208ENST00000603946 PLA2R1Q13018 1463 aa11.69□□□□□ -0.54
NOLC1-208ENST00000603946 CNGB1Q14028 1251 aaPredicted RBP11.69□□□□□ -0.54
NOLC1-208ENST00000603946 RBM33Q96EV2 1170 aaKnown RBP11.69□□□□□ -0.54
NOLC1-208ENST00000603946 CEP152O94986 1710 aa11.69□□□□□ -0.54
NOLC1-208ENST00000603946 ZMYM4Q5VZL5 1548 aa11.69□□□□□ -0.54
NOLC1-208ENST00000603946 ARHGEF40Q8TER5 1519 aa11.69□□□□□ -0.54
NOLC1-208ENST00000603946 NBPF8Q3BBV2 869 aa11.69□□□□□ -0.54
NOLC1-208ENST00000603946 CCDC144AA2RUR9 1427 aa11.68□□□□□ -0.54
NOLC1-208ENST00000603946 TMEM132EQ6IEE7 984 aa11.68□□□□□ -0.54
NOLC1-208ENST00000603946 POLR3GLQ9BT43 218 aa11.68□□□□□ -0.54
NOLC1-208ENST00000603946 PRDM15P57071 1507 aaPredicted RBP11.67□□□□□ -0.54
NOLC1-208ENST00000603946 SAFB2Q14151 953 aaKnown RBP eCLIP11.67□□□□□ -0.54
NOLC1-208ENST00000603946 NBPF1Q3BBV0 1214 aa11.67□□□□□ -0.54
NOLC1-208ENST00000603946 MROH1Q8NDA8 1641 aa11.67□□□□□ -0.54
NOLC1-208ENST00000603946 STK26Q9P289 416 aa11.66□□□□□ -0.54
NOLC1-208ENST00000603946 PPP1R15AO75807 674 aaPredicted RBP11.66□□□□□ -0.54
NOLC1-208ENST00000603946 SLC26A8Q96RN1 970 aa11.66□□□□□ -0.54
NOLC1-208ENST00000603946 CLTCQ00610 1675 aaKnown RBP11.66□□□□□ -0.54
NOLC1-208ENST00000603946 ABCC3O15438 1527 aa11.65□□□□□ -0.54
NOLC1-208ENST00000603946 ADGRF5Q8IZF2 1346 aa11.65□□□□□ -0.54
NOLC1-208ENST00000603946 CFAP70Q5T0N1 1121 aa11.64□□□□□ -0.55
NOLC1-208ENST00000603946 E9PCH4 1651 aa11.62□□□□□ -0.55
NOLC1-208ENST00000603946 MADDQ8WXG6 1647 aa11.62□□□□□ -0.55
NOLC1-208ENST00000603946 LTKP29376 864 aa11.62□□□□□ -0.55
NOLC1-208ENST00000603946 TXNDC2Q86VQ3 553 aa11.62□□□□□ -0.55
NOLC1-208ENST00000603946 PRKCSHP14314 528 aaPredicted RBP11.61□□□□□ -0.55
NOLC1-208ENST00000603946 TNRQ92752 1358 aa11.6□□□□□ -0.55
NOLC1-208ENST00000603946 NCKAP5LQ9HCH0 1330 aa11.6□□□□□ -0.55
NOLC1-208ENST00000603946 RIMS1Q86UR5 1692 aaKnown RBP11.6□□□□□ -0.55
NOLC1-208ENST00000603946 UNC13BO14795 1591 aa11.59□□□□□ -0.55
NOLC1-208ENST00000603946 KDM5DQ9BY66 1539 aa11.59□□□□□ -0.55
NOLC1-208ENST00000603946 AEBP2Q6ZN18 517 aaPredicted RBP11.59□□□□□ -0.55
NOLC1-208ENST00000603946 TRAK1Q9UPV9 953 aa11.58□□□□□ -0.56
NOLC1-208ENST00000603946 SLC52A1Q9NWF4 448 aa11.58□□□□□ -0.56
NOLC1-208ENST00000603946 IQGAP3Q86VI3 1631 aa11.58□□□□□ -0.56
NOLC1-208ENST00000603946 NUTM2FA1L443 756 aa11.58□□□□□ -0.56
NOLC1-208ENST00000603946 AGLP35573 1532 aa11.57□□□□□ -0.56
NOLC1-208ENST00000603946 EFCAB6Q5THR3 1501 aa11.57□□□□□ -0.56
NOLC1-208ENST00000603946 PTPRMP28827 1452 aa11.57□□□□□ -0.56
NOLC1-208ENST00000603946 ZEB1P37275 1124 aaPredicted RBP11.56□□□□□ -0.56
NOLC1-208ENST00000603946 CARD11Q9BXL7 1154 aa11.56□□□□□ -0.56
NOLC1-208ENST00000603946 PPP6R1Q9UPN7 881 aa11.56□□□□□ -0.56
NOLC1-208ENST00000603946 NOS1P29475 1434 aa11.56□□□□□ -0.56
NOLC1-208ENST00000603946 RPRD2Q5VT52 1461 aaKnown RBP11.56□□□□□ -0.56
NOLC1-208ENST00000603946 DEPDC5O75140 1603 aa11.55□□□□□ -0.56
NOLC1-208ENST00000603946 CAMSAP1Q5T5Y3 1602 aa11.55□□□□□ -0.56
NOLC1-208ENST00000603946 ERVK-7P63135 1459 aa11.55□□□□□ -0.56
NOLC1-208ENST00000603946 EIF2AK4Q9P2K8 1649 aaKnown RBP11.55□□□□□ -0.56
NOLC1-208ENST00000603946 RNF17Q9BXT8 1623 aaKnown RBP11.55□□□□□ -0.56
NOLC1-208ENST00000603946 BCORL1Q5H9F3 1711 aa11.55□□□□□ -0.56
NOLC1-208ENST00000603946 VWDEQ8N2E2 1590 aa11.54□□□□□ -0.56
NOLC1-208ENST00000603946 CLTCL1P53675 1640 aa11.54□□□□□ -0.56
NOLC1-208ENST00000603946 FER1L4A9Z1Z3 1794 aa11.54□□□□□ -0.56
NOLC1-208ENST00000603946 TET3O43151 1660 aa11.53□□□□□ -0.56
NOLC1-208ENST00000603946 SYNMO15061 1565 aa11.53□□□□□ -0.56
NOLC1-208ENST00000603946 THEMISQ8N1K5 641 aaPredicted RBP11.53□□□□□ -0.56
NOLC1-208ENST00000603946 PTPRTO14522 1441 aa11.53□□□□□ -0.56
NOLC1-208ENST00000603946 CLSPNQ9HAW4 1339 aa11.53□□□□□ -0.56
NOLC1-208ENST00000603946 PLEKHG5O94827 1062 aa11.52□□□□□ -0.56
NOLC1-208ENST00000603946 WAPLQ7Z5K2 1190 aa11.52□□□□□ -0.56
NOLC1-208ENST00000603946 EID1Q9Y6B2 187 aa11.52□□□□□ -0.57
NOLC1-208ENST00000603946 ST20-MTHFSA0A0A6YYL1 179 aa11.51□□□□□ -0.57
NOLC1-208ENST00000603946 VGFO15240 615 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms