RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 KDM5DQ9BY66 1539 aa36.61■■■■□ 3.45
SSX2IP-209ENST00000603677 RNF17Q9BXT8 1623 aaKnown RBP36.6■■■■□ 3.45
SSX2IP-209ENST00000603677 ANKRD30AQ9BXX3 1397 aa36.59■■■■□ 3.45
SSX2IP-209ENST00000603677 KIF15Q9NS87 1388 aa36.59■■■■□ 3.45
SSX2IP-209ENST00000603677 ERBINQ96RT1 1412 aa36.59■■■■□ 3.45
SSX2IP-209ENST00000603677 WASHC2CQ9Y4E1 1318 aa36.57■■■■□ 3.44
SSX2IP-209ENST00000603677 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.53■■■■□ 3.443e-6■□□□□ 10.1
SSX2IP-209ENST00000603677 PTPRKQ15262 1439 aa36.53■■■■□ 3.44
SSX2IP-209ENST00000603677 ADGRL2O95490 1459 aa36.53■■■■□ 3.44
SSX2IP-209ENST00000603677 ZC3H13Q5T200 1668 aaKnown RBP36.52■■■■□ 3.44
SSX2IP-209ENST00000603677 FAM50AQ14320 339 aaKnown RBP36.52■■■■□ 3.44
SSX2IP-209ENST00000603677 NCOA1Q15788 1441 aa36.51■■■■□ 3.44
SSX2IP-209ENST00000603677 HSPA2P54652 639 aa36.5■■■■□ 3.43
SSX2IP-209ENST00000603677 RRP7BPQ9NSQ0 103 aa36.49■■■■□ 3.43
SSX2IP-209ENST00000603677 PZPP20742 1482 aa36.48■■■■□ 3.43
SSX2IP-209ENST00000603677 DMRT2Q9Y5R5 561 aa36.45■■■■□ 3.43
SSX2IP-209ENST00000603677 MROH1Q8NDA8 1641 aa36.41■■■■□ 3.42
SSX2IP-209ENST00000603677 ABCC3O15438 1527 aa36.4■■■■□ 3.42
SSX2IP-209ENST00000603677 PRDM15P57071 1507 aaPredicted RBP36.4■■■■□ 3.42
SSX2IP-209ENST00000603677 CHIC2Q9UKJ5 165 aa36.4■■■■□ 3.42
SSX2IP-209ENST00000603677 ZNF142P52746 1687 aaPredicted RBP36.39■■■■□ 3.42
SSX2IP-209ENST00000603677 DEPDC5O75140 1603 aa36.38■■■■□ 3.41
SSX2IP-209ENST00000603677 MYO3AQ8NEV4 1616 aa36.37■■■■□ 3.41
SSX2IP-209ENST00000603677 ROCK1Q13464 1354 aa36.36■■■■□ 3.41
SSX2IP-209ENST00000603677 KANK1Q14678 1352 aa36.35■■■■□ 3.41
SSX2IP-209ENST00000603677 CEP170BQ9Y4F5 1589 aaPredicted RBP36.32■■■■□ 3.41
SSX2IP-209ENST00000603677 TNRQ92752 1358 aa36.32■■■■□ 3.4
SSX2IP-209ENST00000603677 ARHGAP31Q2M1Z3 1444 aa36.32■■■■□ 3.4
SSX2IP-209ENST00000603677 A2ML1A8K2U0 1454 aa36.31■■■■□ 3.4
SSX2IP-209ENST00000603677 STRCQ7RTU9 1775 aa36.3■■■■□ 3.4
SSX2IP-209ENST00000603677 ANKRD50Q9ULJ7 1429 aa36.29■■■■□ 3.4
SSX2IP-209ENST00000603677 RRBP1Q9P2E9 1410 aaKnown RBP36.28■■■■□ 3.4
SSX2IP-209ENST00000603677 PLA2R1Q13018 1463 aa36.28■■■■□ 3.4
SSX2IP-209ENST00000603677 NLRP1Q9C000 1473 aa36.28■■■■□ 3.4
SSX2IP-209ENST00000603677 CAMSAP1Q5T5Y3 1602 aa36.26■■■■□ 3.4
SSX2IP-209ENST00000603677 PTPRTO14522 1441 aa36.26■■■■□ 3.4
SSX2IP-209ENST00000603677 FBXO31Q5XUX0 539 aaPredicted RBP36.26■■■■□ 3.4
SSX2IP-209ENST00000603677 SPATA31D1Q6ZQQ2 1576 aa36.26■■■■□ 3.39
SSX2IP-209ENST00000603677 LMTK2Q8IWU2 1503 aa36.25■■■■□ 3.39
SSX2IP-209ENST00000603677 PPARGC1BQ86YN6 1023 aaKnown RBP36.25■■■■□ 3.39
SSX2IP-209ENST00000603677 CEP152O94986 1710 aa36.25■■■■□ 3.39
SSX2IP-209ENST00000603677 VWDEQ8N2E2 1590 aa36.24■■■■□ 3.39
SSX2IP-209ENST00000603677 PKD2Q13563 968 aa36.23■■■■□ 3.39
SSX2IP-209ENST00000603677 ERVK-7P63135 1459 aa36.19■■■■□ 3.38
SSX2IP-209ENST00000603677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.18■■■■□ 3.385e-7■□□□□ 9.3
SSX2IP-209ENST00000603677 THEMISQ8N1K5 641 aaPredicted RBP36.15■■■■□ 3.38
SSX2IP-209ENST00000603677 UGGT1Q9NYU2 1555 aa36.1■■■■□ 3.37
SSX2IP-209ENST00000603677 UNC13BO14795 1591 aa36.07■■■■□ 3.37
SSX2IP-209ENST00000603677 RPRD2Q5VT52 1461 aaKnown RBP36.07■■■■□ 3.37
SSX2IP-209ENST00000603677 EFCAB6Q5THR3 1501 aa36.05■■■■□ 3.36
SSX2IP-209ENST00000603677 CFAP65Q6ZU64 1925 aaKnown RBP36.04■■■■□ 3.36
SSX2IP-209ENST00000603677 ITGAEP38570 1179 aa36.04■■■■□ 3.36
SSX2IP-209ENST00000603677 ANKLE2Q86XL3 938 aa36■■■■□ 3.35
SSX2IP-209ENST00000603677 NCKAP5LQ9HCH0 1330 aa36■■■■□ 3.35
SSX2IP-209ENST00000603677 TET3O43151 1660 aa36■■■■□ 3.35
SSX2IP-209ENST00000603677 NOS1P29475 1434 aa35.97■■■■□ 3.35
SSX2IP-209ENST00000603677 POLR1AO95602 1720 aaPredicted RBP35.97■■■■□ 3.35
SSX2IP-209ENST00000603677 KDM5AP29375 1690 aaKnown RBP35.96■■■■□ 3.35
SSX2IP-209ENST00000603677 GCC2Q8IWJ2 1684 aa35.95■■■■□ 3.35
SSX2IP-209ENST00000603677 CERKQ8TCT0 537 aa35.94■■■■□ 3.34
SSX2IP-209ENST00000603677 FBXO41Q8TF61 875 aa35.94■■■■□ 3.34
SSX2IP-209ENST00000603677 SLC52A1Q9NWF4 448 aa35.94■■■■□ 3.34
SSX2IP-209ENST00000603677 IQGAP3Q86VI3 1631 aa35.94■■■■□ 3.34
SSX2IP-209ENST00000603677 UBR1Q8IWV7 1749 aa35.93■■■■□ 3.34
SSX2IP-209ENST00000603677 MED14O60244 1454 aa35.92■■■■□ 3.34
SSX2IP-209ENST00000603677 NUP155O75694 1391 aa35.89■■■■□ 3.34
SSX2IP-209ENST00000603677 ILDR1Q86SU0 546 aaPredicted RBP35.88■■■■□ 3.33
SSX2IP-209ENST00000603677 NAIPQ13075 1403 aa35.86■■■■□ 3.33
SSX2IP-209ENST00000603677 SLIT1O75093 1534 aa35.86■■■■□ 3.33
SSX2IP-209ENST00000603677 NEURL4Q96JN8 1562 aa35.85■■■■□ 3.33
SSX2IP-209ENST00000603677 HFM1A2PYH4 1435 aa35.85■■■■□ 3.33
SSX2IP-209ENST00000603677 SYNMO15061 1565 aa35.85■■■■□ 3.33
SSX2IP-209ENST00000603677 IDI1Q13907 227 aa35.84■■■■□ 3.33
SSX2IP-209ENST00000603677 IQSEC2Q5JU85 1478 aa35.84■■■■□ 3.33
SSX2IP-209ENST00000603677 ARHGAP23Q9P227 1491 aa35.84■■■■□ 3.33
SSX2IP-209ENST00000603677 PIK3C2BO00750 1634 aa35.83■■■■□ 3.33
SSX2IP-209ENST00000603677 LTBP4Q8N2S1 1624 aa35.83■■■■□ 3.33
SSX2IP-209ENST00000603677 STAG3Q9UJ98 1225 aa35.81■■■■□ 3.32
SSX2IP-209ENST00000603677 NPHP4O75161 1426 aaPredicted RBP35.8■■■■□ 3.32
SSX2IP-209ENST00000603677 EID1Q9Y6B2 187 aa35.78■■■■□ 3.32
SSX2IP-209ENST00000603677 E9PCH4 1651 aa35.78■■■■□ 3.32
SSX2IP-209ENST00000603677 SCAF11Q99590 1463 aaKnown RBP35.76■■■■□ 3.32
SSX2IP-209ENST00000603677 ACIN1Q9UKV3 1341 aaKnown RBP35.76■■■■□ 3.31
SSX2IP-209ENST00000603677 TMEM2Q9UHN6 1383 aa35.76■■■■□ 3.31
SSX2IP-209ENST00000603677 IQGAP1P46940 1657 aa35.74■■■■□ 3.31
SSX2IP-209ENST00000603677 ADGRB3O60242 1522 aa35.73■■■■□ 3.31
SSX2IP-209ENST00000603677 TXNDC2Q86VQ3 553 aa35.71■■■■□ 3.31
SSX2IP-209ENST00000603677 ZNF335Q9H4Z2 1342 aaPredicted RBP35.7■■■■□ 3.31
SSX2IP-209ENST00000603677 HDGFP51858 240 aaKnown RBP35.68■■■■□ 3.3
SSX2IP-209ENST00000603677 CPS1P31327 1500 aa35.66■■■■□ 3.3
SSX2IP-209ENST00000603677 LTKP29376 864 aa35.65■■■■□ 3.3
SSX2IP-209ENST00000603677 TMEM131LA2VDJ0 1609 aa35.61■■■■□ 3.29
SSX2IP-209ENST00000603677 SPHKAPQ2M3C7 1700 aa35.57■■■■□ 3.29
SSX2IP-209ENST00000603677 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.56■■■■□ 3.28
SSX2IP-209ENST00000603677 TRIM52Q96A61 297 aa35.55■■■■□ 3.28
SSX2IP-209ENST00000603677 ZFYVE9O95405 1425 aa35.53■■■■□ 3.28
SSX2IP-209ENST00000603677 MYO5BQ9ULV0 1848 aa35.49■■■■□ 3.27
SSX2IP-209ENST00000603677 TRPM2O94759 1503 aa35.48■■■■□ 3.27
SSX2IP-209ENST00000603677 SLC4A1APQ9BWU0 796 aaKnown RBP35.48■■■■□ 3.27
SSX2IP-209ENST00000603677 RIMS2Q9UQ26 1411 aa35.48■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms