RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 A2MP01023 1474 aa25.42■■□□□ 1.66
PPFIA3-207ENST00000602716 SLC4A1APQ9BWU0 796 aaKnown RBP25.4■■□□□ 1.66
PPFIA3-207ENST00000602716 SIN3AQ96ST3 1273 aa25.39■■□□□ 1.65
PPFIA3-207ENST00000602716 FAM135AQ9P2D6 1515 aa25.38■■□□□ 1.65
PPFIA3-207ENST00000602716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.37■■□□□ 1.65
PPFIA3-207ENST00000602716 EIF2AK4Q9P2K8 1649 aaKnown RBP25.37■■□□□ 1.65
PPFIA3-207ENST00000602716 MROH1Q8NDA8 1641 aa25.36■■□□□ 1.65
PPFIA3-207ENST00000602716 DEPDC5O75140 1603 aa25.36■■□□□ 1.65
PPFIA3-207ENST00000602716 IQGAP3Q86VI3 1631 aa25.35■■□□□ 1.65
PPFIA3-207ENST00000602716 KIF3BO15066 747 aa25.34■■□□□ 1.65
PPFIA3-207ENST00000602716 ACIN1Q9UKV3 1341 aaKnown RBP25.33■■□□□ 1.65
PPFIA3-207ENST00000602716 PKD2Q13563 968 aa25.32■■□□□ 1.64
PPFIA3-207ENST00000602716 PRDM15P57071 1507 aaPredicted RBP25.3■■□□□ 1.64
PPFIA3-207ENST00000602716 NEUROD1Q13562 356 aa25.3■■□□□ 1.64
PPFIA3-207ENST00000602716 ARHGEF40Q8TER5 1519 aa25.29■■□□□ 1.64
PPFIA3-207ENST00000602716 RNF17Q9BXT8 1623 aaKnown RBP25.29■■□□□ 1.64
PPFIA3-207ENST00000602716 ANKRD30BQ9BXX2 1392 aa25.29■■□□□ 1.64
PPFIA3-207ENST00000602716 VWDEQ8N2E2 1590 aa25.28■■□□□ 1.64
PPFIA3-207ENST00000602716 SIGLEC1Q9BZZ2 1709 aa25.27■■□□□ 1.64
PPFIA3-207ENST00000602716 BCORL1Q5H9F3 1711 aa25.26■■□□□ 1.63
PPFIA3-207ENST00000602716 ATP10AO60312 1499 aa25.24■■□□□ 1.63
PPFIA3-207ENST00000602716 REREQ9P2R6 1566 aa25.2■■□□□ 1.62
PPFIA3-207ENST00000602716 GGT6Q6P531 493 aa25.18■■□□□ 1.62
PPFIA3-207ENST00000602716 CEP152O94986 1710 aa25.17■■□□□ 1.62
PPFIA3-207ENST00000602716 E9PCH4 1651 aa25.17■■□□□ 1.62
PPFIA3-207ENST00000602716 TET3O43151 1660 aa25.17■■□□□ 1.62
PPFIA3-207ENST00000602716 PLA2R1Q13018 1463 aa25.17■■□□□ 1.62
PPFIA3-207ENST00000602716 KANK1Q14678 1352 aa25.16■■□□□ 1.62
PPFIA3-207ENST00000602716 RPRD2Q5VT52 1461 aaKnown RBP25.15■■□□□ 1.62
PPFIA3-207ENST00000602716 ABCC3O15438 1527 aa25.14■■□□□ 1.62
PPFIA3-207ENST00000602716 EFCAB6Q5THR3 1501 aa25.13■■□□□ 1.61
PPFIA3-207ENST00000602716 LMTK2Q8IWU2 1503 aa25.13■■□□□ 1.61
PPFIA3-207ENST00000602716 AGLP35573 1532 aa25.13■■□□□ 1.61
PPFIA3-207ENST00000602716 TONSLQ96HA7 1378 aa25.11■■□□□ 1.61
PPFIA3-207ENST00000602716 NPATQ14207 1427 aa25.05■■□□□ 1.6
PPFIA3-207ENST00000602716 CAMSAP1Q5T5Y3 1602 aa25.05■■□□□ 1.6
PPFIA3-207ENST00000602716 WASHC2CQ9Y4E1 1318 aa25.04■■□□□ 1.6
PPFIA3-207ENST00000602716 TRPM2O94759 1503 aa25.03■■□□□ 1.6
PPFIA3-207ENST00000602716 PTPRTO14522 1441 aa25.02■■□□□ 1.6
PPFIA3-207ENST00000602716 SPHKAPQ2M3C7 1700 aa25.02■■□□□ 1.6
PPFIA3-207ENST00000602716 CCDC144AA2RUR9 1427 aa25.02■■□□□ 1.6
PPFIA3-207ENST00000602716 MLECQ14165 292 aa25.02■■□□□ 1.6
PPFIA3-207ENST00000602716 ZC3H13Q5T200 1668 aaKnown RBP25.01■■□□□ 1.59
PPFIA3-207ENST00000602716 UGGT1Q9NYU2 1555 aa25.01■■□□□ 1.59
PPFIA3-207ENST00000602716 L3MBTL2Q969R5 705 aa25■■□□□ 1.59
PPFIA3-207ENST00000602716 TIMELESSQ9UNS1 1208 aa25■■□□□ 1.59
PPFIA3-207ENST00000602716 CLTCL1P53675 1640 aa24.99■■□□□ 1.59
PPFIA3-207ENST00000602716 PPP1R15AO75807 674 aaPredicted RBP24.98■■□□□ 1.59
PPFIA3-207ENST00000602716 ARID4BQ4LE39 1312 aaPredicted RBP24.94■■□□□ 1.58
PPFIA3-207ENST00000602716 CLTCQ00610 1675 aaKnown RBP24.94■■□□□ 1.58
PPFIA3-207ENST00000602716 ARHGAP31Q2M1Z3 1444 aa24.92■■□□□ 1.58
PPFIA3-207ENST00000602716 SYNMO15061 1565 aa24.9■■□□□ 1.58
PPFIA3-207ENST00000602716 NOS1P29475 1434 aa24.89■■□□□ 1.58
PPFIA3-207ENST00000602716 SPATA31E1Q6ZUB1 1445 aa24.88■■□□□ 1.57
PPFIA3-207ENST00000602716 DIEXFQ68CQ4 756 aaKnown RBP24.88■■□□□ 1.57
PPFIA3-207ENST00000602716 CNTLNQ9NXG0 1405 aa24.87■■□□□ 1.57
PPFIA3-207ENST00000602716 SCAF1Q9H7N4 1312 aaKnown RBP24.86■■□□□ 1.57
PPFIA3-207ENST00000602716 CFAP65Q6ZU64 1925 aaKnown RBP24.86■■□□□ 1.57
PPFIA3-207ENST00000602716 NBPF8Q3BBV2 869 aa24.86■■□□□ 1.57
PPFIA3-207ENST00000602716 RGL3Q3MIN7 710 aa24.85■■□□□ 1.57
PPFIA3-207ENST00000602716 PREX1Q8TCU6 1659 aa24.85■■□□□ 1.57
PPFIA3-207ENST00000602716 FBXO31Q5XUX0 539 aaPredicted RBP24.84■■□□□ 1.57
PPFIA3-207ENST00000602716 PPP6R1Q9UPN7 881 aa24.84■■□□□ 1.57
PPFIA3-207ENST00000602716 ERVK-7P63135 1459 aa24.83■■□□□ 1.57
PPFIA3-207ENST00000602716 MROH2AA6NES4 1674 aa24.83■■□□□ 1.56
PPFIA3-207ENST00000602716 PIK3C2BO00750 1634 aa24.81■■□□□ 1.56
PPFIA3-207ENST00000602716 ADGRB3O60242 1522 aa24.79■■□□□ 1.56
PPFIA3-207ENST00000602716 DCAF11Q8TEB1 546 aa24.79■■□□□ 1.56
PPFIA3-207ENST00000602716 ZNF326Q5BKZ1 582 aaKnown RBP24.78■■□□□ 1.56
PPFIA3-207ENST00000602716 KDM2AQ9Y2K7 1162 aa24.78■■□□□ 1.56
PPFIA3-207ENST00000602716 ZMYM3Q14202 1370 aa24.77■■□□□ 1.56
PPFIA3-207ENST00000602716 SPATA31D1Q6ZQQ2 1576 aa24.77■■□□□ 1.56
PPFIA3-207ENST00000602716 UHRF1BP1Q6BDS2 1440 aa24.75■■□□□ 1.55
PPFIA3-207ENST00000602716 ZNF316A6NFI3 1004 aaPredicted RBP24.74■■□□□ 1.55
PPFIA3-207ENST00000602716 ESF1Q9H501 851 aaKnown RBP24.74■■□□□ 1.55
PPFIA3-207ENST00000602716 NEURL4Q96JN8 1562 aa24.73■■□□□ 1.55
PPFIA3-207ENST00000602716 FER1L4A9Z1Z3 1794 aa24.73■■□□□ 1.55
PPFIA3-207ENST00000602716 KIF1BO60333 1816 aa24.73■■□□□ 1.55
PPFIA3-207ENST00000602716 PRAG1Q86YV5 1406 aa24.72■■□□□ 1.55
PPFIA3-207ENST00000602716 IDI1Q13907 227 aa24.71■■□□□ 1.55
PPFIA3-207ENST00000602716 CHGAP10645 457 aaKnown RBP24.71■■□□□ 1.55
PPFIA3-207ENST00000602716 MADDQ8WXG6 1647 aa24.7■■□□□ 1.54
PPFIA3-207ENST00000602716 CEBPAP49715 358 aaPredicted RBP24.68■■□□□ 1.54
PPFIA3-207ENST00000602716 RALGAPBQ86X10 1494 aa24.67■■□□□ 1.54
PPFIA3-207ENST00000602716 IFT172Q9UG01 1749 aa24.66■■□□□ 1.54
PPFIA3-207ENST00000602716 C3P01024 1663 aa24.66■■□□□ 1.54
PPFIA3-207ENST00000602716 HIRIP3Q9BW71 556 aaPredicted RBP24.66■■□□□ 1.54
PPFIA3-207ENST00000602716 TMEM131LA2VDJ0 1609 aa24.65■■□□□ 1.54
PPFIA3-207ENST00000602716 SLC52A1Q9NWF4 448 aa24.64■■□□□ 1.53
PPFIA3-207ENST00000602716 TRPM1Q7Z4N2 1603 aa24.64■■□□□ 1.53
PPFIA3-207ENST00000602716 ADAMTSL3P82987 1691 aa24.63■■□□□ 1.53
PPFIA3-207ENST00000602716 RIMS1Q86UR5 1692 aaKnown RBP24.62■■□□□ 1.53
PPFIA3-207ENST00000602716 PLPPR3Q6T4P5 718 aa24.62■■□□□ 1.53
PPFIA3-207ENST00000602716 MYO5BQ9ULV0 1848 aa24.62■■□□□ 1.53
PPFIA3-207ENST00000602716 MYOM2P54296 1465 aa24.62■■□□□ 1.53
PPFIA3-207ENST00000602716 TNRQ92752 1358 aa24.61■■□□□ 1.53
PPFIA3-207ENST00000602716 NEXMIFQ5QGS0 1516 aa24.6■■□□□ 1.53
PPFIA3-207ENST00000602716 ADGRF5Q8IZF2 1346 aa24.6■■□□□ 1.53
PPFIA3-207ENST00000602716 PPLO60437 1756 aa24.59■■□□□ 1.53
PPFIA3-207ENST00000602716 NBPF1Q3BBV0 1214 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms