RNA–Protein interactions for RNA: ENST00000602670.1

SFXN2-209, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-209ENST00000602670 CCNB3Q8WWL7 1395 aa20.85■□□□□ 0.93
SFXN2-209ENST00000602670 TNRQ92752 1358 aa20.85■□□□□ 0.93
SFXN2-209ENST00000602670 FBXO31Q5XUX0 539 aaPredicted RBP20.81■□□□□ 0.92
SFXN2-209ENST00000602670 PHF23Q9BUL5 403 aaPredicted RBP20.81■□□□□ 0.92
SFXN2-209ENST00000602670 PZPP20742 1482 aa20.81■□□□□ 0.92
SFXN2-209ENST00000602670 MBD5Q9P267 1494 aa20.81■□□□□ 0.92
SFXN2-209ENST00000602670 DHX29Q7Z478 1369 aaKnown RBP20.79■□□□□ 0.92
SFXN2-209ENST00000602670 ZNF644Q9H582 1327 aaPredicted RBP20.78■□□□□ 0.92
SFXN2-209ENST00000602670 RTEL1-TNFRSF6BF6WH68 1400 aa20.78■□□□□ 0.92
SFXN2-209ENST00000602670 KDM5DQ9BY66 1539 aa20.78■□□□□ 0.92
SFXN2-209ENST00000602670 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.78■□□□□ 0.92
SFXN2-209ENST00000602670 TIAM1Q13009 1591 aa20.77■□□□□ 0.92
SFXN2-209ENST00000602670 MED14O60244 1454 aa20.77■□□□□ 0.92
SFXN2-209ENST00000602670 DEPDC5O75140 1603 aa20.77■□□□□ 0.92
SFXN2-209ENST00000602670 FAM135AQ9P2D6 1515 aa20.77■□□□□ 0.92
SFXN2-209ENST00000602670 ANKLE2Q86XL3 938 aa20.76■□□□□ 0.91
SFXN2-209ENST00000602670 NPHP4O75161 1426 aaPredicted RBP20.76■□□□□ 0.91
SFXN2-209ENST00000602670 MTUS2Q5JR59 1369 aa20.74■□□□□ 0.91
SFXN2-209ENST00000602670 NLRP1Q9C000 1473 aa20.74■□□□□ 0.91
SFXN2-209ENST00000602670 UGGT1Q9NYU2 1555 aa20.73■□□□□ 0.91
SFXN2-209ENST00000602670 KIF3BO15066 747 aa20.73■□□□□ 0.91
SFXN2-209ENST00000602670 IQGAP1P46940 1657 aa20.73■□□□□ 0.91
SFXN2-209ENST00000602670 STRCP1A6NGW2 1772 aa20.72■□□□□ 0.91
SFXN2-209ENST00000602670 MIA2Q96PC5 1412 aa20.72■□□□□ 0.91
SFXN2-209ENST00000602670 THEMISQ8N1K5 641 aaPredicted RBP20.72■□□□□ 0.91
SFXN2-209ENST00000602670 RNF17Q9BXT8 1623 aaKnown RBP20.71■□□□□ 0.91
SFXN2-209ENST00000602670 LRRC7Q96NW7 1537 aa20.7■□□□□ 0.9
SFXN2-209ENST00000602670 CHIC1Q5VXU3 224 aa20.7■□□□□ 0.9
SFXN2-209ENST00000602670 SYNMO15061 1565 aa20.69■□□□□ 0.9
SFXN2-209ENST00000602670 WASHC2CQ9Y4E1 1318 aa20.69■□□□□ 0.9
SFXN2-209ENST00000602670 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
SFXN2-209ENST00000602670 CCDC141Q6ZP82 1450 aa20.67■□□□□ 0.9
SFXN2-209ENST00000602670 EHBP1L1Q8N3D4 1523 aa20.67■□□□□ 0.9
SFXN2-209ENST00000602670 CEP162Q5TB80 1403 aa20.64■□□□□ 0.89
SFXN2-209ENST00000602670 RGS17Q9UGC6 210 aaPredicted RBP20.64■□□□□ 0.89
SFXN2-209ENST00000602670 ZC3H13Q5T200 1668 aaKnown RBP20.62■□□□□ 0.89
SFXN2-209ENST00000602670 CAMSAP2Q08AD1 1489 aa20.62■□□□□ 0.89
SFXN2-209ENST00000602670 ABCC3O15438 1527 aa20.58■□□□□ 0.89
SFXN2-209ENST00000602670 ERVK-7P63135 1459 aa20.57■□□□□ 0.88
SFXN2-209ENST00000602670 RSPH4AQ5TD94 716 aa20.56■□□□□ 0.88
SFXN2-209ENST00000602670 ARHGEF5Q12774 1597 aa20.55■□□□□ 0.88
SFXN2-209ENST00000602670 XIRP1Q702N8 1843 aaKnown RBP20.55■□□□□ 0.88
SFXN2-209ENST00000602670 UBR1Q8IWV7 1749 aa20.55■□□□□ 0.88
SFXN2-209ENST00000602670 NCOA2Q15596 1464 aa20.54■□□□□ 0.88
SFXN2-209ENST00000602670 SCAF11Q99590 1463 aaKnown RBP20.54■□□□□ 0.88
SFXN2-209ENST00000602670 MROH1Q8NDA8 1641 aa20.52■□□□□ 0.88
SFXN2-209ENST00000602670 ARHGAP23Q9P227 1491 aa20.5■□□□□ 0.87
SFXN2-209ENST00000602670 EIF2AK4Q9P2K8 1649 aaKnown RBP20.49■□□□□ 0.87
SFXN2-209ENST00000602670 SLIT1O75093 1534 aa20.49■□□□□ 0.87
SFXN2-209ENST00000602670 POTEAQ6S8J7 498 aa20.49■□□□□ 0.87
SFXN2-209ENST00000602670 CEP152O94986 1710 aa20.48■□□□□ 0.87
SFXN2-209ENST00000602670 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
SFXN2-209ENST00000602670 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
SFXN2-209ENST00000602670 MAST1Q9Y2H9 1570 aa20.47■□□□□ 0.87
SFXN2-209ENST00000602670 FAM135BQ49AJ0 1406 aa20.47■□□□□ 0.87
SFXN2-209ENST00000602670 LTKP29376 864 aa20.47■□□□□ 0.87
SFXN2-209ENST00000602670 CFAP65Q6ZU64 1925 aaKnown RBP20.47■□□□□ 0.87
SFXN2-209ENST00000602670 TXNDC2Q86VQ3 553 aa20.44■□□□□ 0.86
SFXN2-209ENST00000602670 ROBO1Q9Y6N7 1651 aa20.41■□□□□ 0.86
SFXN2-209ENST00000602670 SETD1AO15047 1707 aaKnown RBP20.4■□□□□ 0.86
SFXN2-209ENST00000602670 MAP3K1Q13233 1512 aa20.39■□□□□ 0.85
SFXN2-209ENST00000602670 TMEM94Q12767 1356 aa20.39■□□□□ 0.85
SFXN2-209ENST00000602670 ARHGAP31Q2M1Z3 1444 aa20.38■□□□□ 0.85
SFXN2-209ENST00000602670 PIK3C2BO00750 1634 aa20.38■□□□□ 0.85
SFXN2-209ENST00000602670 EID1Q9Y6B2 187 aa20.37■□□□□ 0.85
SFXN2-209ENST00000602670 PRDM15P57071 1507 aaPredicted RBP20.37■□□□□ 0.85
SFXN2-209ENST00000602670 TMEM2Q9UHN6 1383 aa20.36■□□□□ 0.85
SFXN2-209ENST00000602670 DUOX2Q9NRD8 1548 aa20.35■□□□□ 0.85
SFXN2-209ENST00000602670 LRRC9Q6ZRR7 1453 aa20.34■□□□□ 0.85
SFXN2-209ENST00000602670 KCNA6P17658 529 aa20.32■□□□□ 0.84
SFXN2-209ENST00000602670 TET3O43151 1660 aa20.32■□□□□ 0.84
SFXN2-209ENST00000602670 KDM5AP29375 1690 aaKnown RBP20.31■□□□□ 0.84
SFXN2-209ENST00000602670 EFCAB6Q5THR3 1501 aa20.31■□□□□ 0.84
SFXN2-209ENST00000602670 RBM33Q96EV2 1170 aaKnown RBP20.3■□□□□ 0.84
SFXN2-209ENST00000602670 NWD1Q149M9 1564 aa20.29■□□□□ 0.84
SFXN2-209ENST00000602670 NKTRP30414 1462 aaKnown RBP20.29■□□□□ 0.84
SFXN2-209ENST00000602670 PHLPP1O60346 1717 aa20.28■□□□□ 0.84
SFXN2-209ENST00000602670 PROSER2Q86WR7 435 aaPredicted RBP20.28■□□□□ 0.84
SFXN2-209ENST00000602670 SLC26A8Q96RN1 970 aa20.28■□□□□ 0.84
SFXN2-209ENST00000602670 ERBINQ96RT1 1412 aa20.27■□□□□ 0.84
SFXN2-209ENST00000602670 KIF15Q9NS87 1388 aa20.27■□□□□ 0.84
SFXN2-209ENST00000602670 JCADQ9P266 1359 aa20.26■□□□□ 0.83
SFXN2-209ENST00000602670 STAG3Q9UJ98 1225 aa20.26■□□□□ 0.83
SFXN2-209ENST00000602670 MYOM3Q5VTT5 1437 aa20.26■□□□□ 0.83
SFXN2-209ENST00000602670 IDI1Q13907 227 aa20.24■□□□□ 0.83
SFXN2-209ENST00000602670 MSH6P52701 1360 aa20.23■□□□□ 0.83
SFXN2-209ENST00000602670 CROCC2H7BZ55 1655 aa20.23■□□□□ 0.83
SFXN2-209ENST00000602670 COL16A1Q07092 1604 aaPredicted RBP20.23■□□□□ 0.83
SFXN2-209ENST00000602670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.22■□□□□ 0.83
SFXN2-209ENST00000602670 SLAIN2Q9P270 581 aa20.22■□□□□ 0.83
SFXN2-209ENST00000602670 ADGRB3O60242 1522 aa20.22■□□□□ 0.83
SFXN2-209ENST00000602670 LRP6O75581 1613 aa20.21■□□□□ 0.83
SFXN2-209ENST00000602670 LMTK2Q8IWU2 1503 aa20.21■□□□□ 0.83
SFXN2-209ENST00000602670 ABCC5O15440 1437 aa20.19■□□□□ 0.82
SFXN2-209ENST00000602670 UPF1Q92900 1129 aaKnown RBP eCLIP20.19■□□□□ 0.82
SFXN2-209ENST00000602670 RRP7BPQ9NSQ0 103 aa20.19■□□□□ 0.82
SFXN2-209ENST00000602670 KANK1Q14678 1352 aa20.19■□□□□ 0.82
SFXN2-209ENST00000602670 KANK4Q5T7N3 995 aaPredicted RBP20.18■□□□□ 0.82
SFXN2-209ENST00000602670 NOS1P29475 1434 aa20.18■□□□□ 0.82
SFXN2-209ENST00000602670 VPS8Q8N3P4 1428 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms