RNA–Protein interactions for RNA: ENST00000602509.5

PPFIA3-205, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-205ENST00000602509 TCOF1Q13428 1488 aaKnown RBP40.77■■■■■ 4.12
PPFIA3-205ENST00000602509 SHANK2Q9UPX8 1470 aa40.77■■■■■ 4.12
PPFIA3-205ENST00000602509 STRCQ7RTU9 1775 aa40.76■■■■■ 4.12
PPFIA3-205ENST00000602509 DAPK1P53355 1430 aa40.75■■■■■ 4.11
PPFIA3-205ENST00000602509 RRP7BPQ9NSQ0 103 aa40.74■■■■■ 4.11
PPFIA3-205ENST00000602509 KIF15Q9NS87 1388 aa40.74■■■■■ 4.11
PPFIA3-205ENST00000602509 FBXO31Q5XUX0 539 aaPredicted RBP40.73■■■■■ 4.11
PPFIA3-205ENST00000602509 NCOA1Q15788 1441 aa40.73■■■■■ 4.11
PPFIA3-205ENST00000602509 DUOX2Q9NRD8 1548 aa40.72■■■■■ 4.11
PPFIA3-205ENST00000602509 MYO3AQ8NEV4 1616 aa40.71■■■■■ 4.11
PPFIA3-205ENST00000602509 PZPP20742 1482 aa40.7■■■■■ 4.11
PPFIA3-205ENST00000602509 PTPRTO14522 1441 aa40.69■■■■■ 4.1
PPFIA3-205ENST00000602509 TNRQ92752 1358 aa40.69■■■■■ 4.1
PPFIA3-205ENST00000602509 CAMSAP1Q5T5Y3 1602 aa40.68■■■■■ 4.1
PPFIA3-205ENST00000602509 EIF2AK4Q9P2K8 1649 aaKnown RBP40.68■■■■■ 4.1
PPFIA3-205ENST00000602509 RNF17Q9BXT8 1623 aaKnown RBP40.67■■■■■ 4.1
PPFIA3-205ENST00000602509 DNMT1P26358 1616 aaKnown RBP40.67■■■■■ 4.1
PPFIA3-205ENST00000602509 CEP170BQ9Y4F5 1589 aaPredicted RBP40.66■■■■■ 4.1
PPFIA3-205ENST00000602509 FAM50AQ14320 339 aaKnown RBP40.66■■■■■ 4.1
PPFIA3-205ENST00000602509 CERKQ8TCT0 537 aa40.66■■■■■ 4.1
PPFIA3-205ENST00000602509 CHIC2Q9UKJ5 165 aa40.66■■■■■ 4.1
PPFIA3-205ENST00000602509 CROCC2H7BZ55 1655 aa40.66■■■■■ 4.1
PPFIA3-205ENST00000602509 ANKRD30AQ9BXX3 1397 aa40.62■■■■■ 4.09
PPFIA3-205ENST00000602509 ZNF142P52746 1687 aaPredicted RBP40.62■■■■■ 4.09
PPFIA3-205ENST00000602509 A2ML1A8K2U0 1454 aa40.61■■■■■ 4.09
PPFIA3-205ENST00000602509 NCKAP5LQ9HCH0 1330 aa40.61■■■■■ 4.09
PPFIA3-205ENST00000602509 ERBINQ96RT1 1412 aa40.6■■■■■ 4.09
PPFIA3-205ENST00000602509 ABCC3O15438 1527 aa40.6■■■■■ 4.09
PPFIA3-205ENST00000602509 PKD2Q13563 968 aa40.58■■■■■ 4.09
PPFIA3-205ENST00000602509 PLA2R1Q13018 1463 aa40.57■■■■■ 4.08
PPFIA3-205ENST00000602509 ZC3H13Q5T200 1668 aaKnown RBP40.53■■■■■ 4.08
PPFIA3-205ENST00000602509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.53■■■■■ 4.08
PPFIA3-205ENST00000602509 MROH1Q8NDA8 1641 aa40.53■■■■■ 4.08
PPFIA3-205ENST00000602509 NLRP1Q9C000 1473 aa40.48■■■■■ 4.07
PPFIA3-205ENST00000602509 KANK1Q14678 1352 aa40.47■■■■■ 4.07
PPFIA3-205ENST00000602509 THEMISQ8N1K5 641 aaPredicted RBP40.44■■■■■ 4.06
PPFIA3-205ENST00000602509 PRDM15P57071 1507 aaPredicted RBP40.43■■■■■ 4.06
PPFIA3-205ENST00000602509 PPARGC1BQ86YN6 1023 aaKnown RBP40.43■■■■■ 4.06
PPFIA3-205ENST00000602509 ADGRL2O95490 1459 aa40.43■■■■■ 4.06
PPFIA3-205ENST00000602509 ERVK-7P63135 1459 aa40.4■■■■■ 4.06
PPFIA3-205ENST00000602509 SPATA31D1Q6ZQQ2 1576 aa40.39■■■■■ 4.06
PPFIA3-205ENST00000602509 CEP152O94986 1710 aa40.39■■■■■ 4.06
PPFIA3-205ENST00000602509 UGGT1Q9NYU2 1555 aa40.36■■■■■ 4.05
PPFIA3-205ENST00000602509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.35■■■■■ 4.05
PPFIA3-205ENST00000602509 ARHGAP31Q2M1Z3 1444 aa40.35■■■■■ 4.05
PPFIA3-205ENST00000602509 ANKLE2Q86XL3 938 aa40.35■■■■■ 4.05
PPFIA3-205ENST00000602509 DEPDC5O75140 1603 aa40.33■■■■■ 4.05
PPFIA3-205ENST00000602509 ZNF335Q9H4Z2 1342 aaPredicted RBP40.3■■■■■ 4.04
PPFIA3-205ENST00000602509 ANKRD50Q9ULJ7 1429 aa40.3■■■■■ 4.04
PPFIA3-205ENST00000602509 LTBP4Q8N2S1 1624 aa40.3■■■■■ 4.04
PPFIA3-205ENST00000602509 LMTK2Q8IWU2 1503 aa40.23■■■■■ 4.03
PPFIA3-205ENST00000602509 ITGAEP38570 1179 aa40.23■■■■■ 4.03
PPFIA3-205ENST00000602509 VWDEQ8N2E2 1590 aa40.2■■■■■ 4.03
PPFIA3-205ENST00000602509 ROCK1Q13464 1354 aa40.19■■■■■ 4.02
PPFIA3-205ENST00000602509 POLR1AO95602 1720 aaPredicted RBP40.18■■■■■ 4.02
PPFIA3-205ENST00000602509 CFAP65Q6ZU64 1925 aaKnown RBP40.18■■■■■ 4.02
PPFIA3-205ENST00000602509 NEURL4Q96JN8 1562 aa40.18■■■■■ 4.02
PPFIA3-205ENST00000602509 IQSEC2Q5JU85 1478 aa40.15■■■■■ 4.02
PPFIA3-205ENST00000602509 NPHP4O75161 1426 aaPredicted RBP40.15■■■■■ 4.02
PPFIA3-205ENST00000602509 STAG3Q9UJ98 1225 aa40.12■■■■■ 4.01
PPFIA3-205ENST00000602509 MED14O60244 1454 aa40.11■■■■■ 4.01
PPFIA3-205ENST00000602509 EFCAB6Q5THR3 1501 aa40.09■■■■■ 4.01
PPFIA3-205ENST00000602509 UBR1Q8IWV7 1749 aa40.06■■■■■ 4
PPFIA3-205ENST00000602509 IDI1Q13907 227 aa40.05■■■■■ 4
PPFIA3-205ENST00000602509 TXNDC2Q86VQ3 553 aa40.03■■■■■ 4
PPFIA3-205ENST00000602509 EID1Q9Y6B2 187 aa40.03■■■■■ 4
PPFIA3-205ENST00000602509 NOS1P29475 1434 aa40.02■■■■■ 4
PPFIA3-205ENST00000602509 SCAF11Q99590 1463 aaKnown RBP40■■■■□ 3.99
PPFIA3-205ENST00000602509 RPRD2Q5VT52 1461 aaKnown RBP40■■■■□ 3.99
PPFIA3-205ENST00000602509 SLC52A1Q9NWF4 448 aa39.99■■■■□ 3.99
PPFIA3-205ENST00000602509 LTKP29376 864 aa39.98■■■■□ 3.99
PPFIA3-205ENST00000602509 PIK3C2BO00750 1634 aa39.98■■■■□ 3.99
PPFIA3-205ENST00000602509 SLIT1O75093 1534 aa39.97■■■■□ 3.99
PPFIA3-205ENST00000602509 IQGAP1P46940 1657 aa39.97■■■■□ 3.99
PPFIA3-205ENST00000602509 ARHGAP23Q9P227 1491 aa39.97■■■■□ 3.99
PPFIA3-205ENST00000602509 UBAP1LF5GYI3 381 aa39.97■■■■□ 3.99
PPFIA3-205ENST00000602509 RRBP1Q9P2E9 1410 aaKnown RBP39.96■■■■□ 3.99
PPFIA3-205ENST00000602509 CPS1P31327 1500 aa39.96■■■■□ 3.99
PPFIA3-205ENST00000602509 UNC13BO14795 1591 aa39.95■■■■□ 3.99
PPFIA3-205ENST00000602509 SYNMO15061 1565 aa39.95■■■■□ 3.99
PPFIA3-205ENST00000602509 TMEM2Q9UHN6 1383 aa39.95■■■■□ 3.99
PPFIA3-205ENST00000602509 TET3O43151 1660 aa39.92■■■■□ 3.98
PPFIA3-205ENST00000602509 NUP155O75694 1391 aa39.91■■■■□ 3.98
PPFIA3-205ENST00000602509 KDM5AP29375 1690 aaKnown RBP39.85■■■■□ 3.97
PPFIA3-205ENST00000602509 ADGRB3O60242 1522 aa39.83■■■■□ 3.97
PPFIA3-205ENST00000602509 GCC2Q8IWJ2 1684 aa39.82■■■■□ 3.96
PPFIA3-205ENST00000602509 IQGAP3Q86VI3 1631 aa39.8■■■■□ 3.96
PPFIA3-205ENST00000602509 TOM1O60784 492 aa39.77■■■■□ 3.96
PPFIA3-205ENST00000602509 CHGAP10645 457 aaKnown RBP39.74■■■■□ 3.95
PPFIA3-205ENST00000602509 HDGFP51858 240 aaKnown RBP39.72■■■■□ 3.95
PPFIA3-205ENST00000602509 E9PCH4 1651 aa39.72■■■■□ 3.95
PPFIA3-205ENST00000602509 SCAF1Q9H7N4 1312 aaKnown RBP39.71■■■■□ 3.95
PPFIA3-205ENST00000602509 BCANQ96GW7 911 aa39.71■■■■□ 3.95
PPFIA3-205ENST00000602509 NAIPQ13075 1403 aa39.69■■■■□ 3.94
PPFIA3-205ENST00000602509 PIP4K2BP78356 416 aa39.69■■■■□ 3.94
PPFIA3-205ENST00000602509 LRRC7Q96NW7 1537 aa39.67■■■■□ 3.94
PPFIA3-205ENST00000602509 PPP1R15AO75807 674 aaPredicted RBP39.67■■■■□ 3.94
PPFIA3-205ENST00000602509 SLC26A8Q96RN1 970 aa39.67■■■■□ 3.94
PPFIA3-205ENST00000602509 RIMS2Q9UQ26 1411 aa39.64■■■■□ 3.94
PPFIA3-205ENST00000602509 STRCP1A6NGW2 1772 aa39.63■■■■□ 3.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms