RNA–Protein interactions for RNA: ENST00000602165.1

GTPBP3-228, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-228ENST00000602165 ABCC5O15440 1437 aa28.5■■■□□ 2.15
GTPBP3-228ENST00000602165 RNF17Q9BXT8 1623 aaKnown RBP28.5■■■□□ 2.15
GTPBP3-228ENST00000602165 EIF2AK4Q9P2K8 1649 aaKnown RBP28.5■■■□□ 2.15
GTPBP3-228ENST00000602165 SHANK2Q9UPX8 1470 aa28.49■■■□□ 2.15
GTPBP3-228ENST00000602165 FAM135AQ9P2D6 1515 aa28.48■■■□□ 2.15
GTPBP3-228ENST00000602165 ZNF142P52746 1687 aaPredicted RBP28.48■■■□□ 2.15
GTPBP3-228ENST00000602165 DAPK1P53355 1430 aa28.47■■■□□ 2.15
GTPBP3-228ENST00000602165 DUOX2Q9NRD8 1548 aa28.45■■■□□ 2.15
GTPBP3-228ENST00000602165 WASHC2CQ9Y4E1 1318 aa28.43■■■□□ 2.14
GTPBP3-228ENST00000602165 CEP170BQ9Y4F5 1589 aaPredicted RBP28.42■■■□□ 2.14
GTPBP3-228ENST00000602165 MROH1Q8NDA8 1641 aa28.42■■■□□ 2.14
GTPBP3-228ENST00000602165 KIF15Q9NS87 1388 aa28.41■■■□□ 2.14
GTPBP3-228ENST00000602165 CAMSAP1Q5T5Y3 1602 aa28.41■■■□□ 2.14
GTPBP3-228ENST00000602165 ZC3H13Q5T200 1668 aaKnown RBP28.41■■■□□ 2.14
GTPBP3-228ENST00000602165 CEP152O94986 1710 aa28.4■■■□□ 2.14
GTPBP3-228ENST00000602165 PZPP20742 1482 aa28.4■■■□□ 2.14
GTPBP3-228ENST00000602165 NCOA1Q15788 1441 aa28.38■■■□□ 2.13
GTPBP3-228ENST00000602165 RRP7BPQ9NSQ0 103 aa28.38■■■□□ 2.13
GTPBP3-228ENST00000602165 ABCC3O15438 1527 aa28.38■■■□□ 2.13
GTPBP3-228ENST00000602165 FBXO31Q5XUX0 539 aaPredicted RBP28.37■■■□□ 2.13
GTPBP3-228ENST00000602165 FAM50AQ14320 339 aaKnown RBP28.35■■■□□ 2.13
GTPBP3-228ENST00000602165 CHIC2Q9UKJ5 165 aa28.35■■■□□ 2.13
GTPBP3-228ENST00000602165 DMRT2Q9Y5R5 561 aa28.35■■■□□ 2.13
GTPBP3-228ENST00000602165 ERBINQ96RT1 1412 aa28.35■■■□□ 2.13
GTPBP3-228ENST00000602165 TNRQ92752 1358 aa28.33■■■□□ 2.13
GTPBP3-228ENST00000602165 CFAP65Q6ZU64 1925 aaKnown RBP28.32■■■□□ 2.12
GTPBP3-228ENST00000602165 A2ML1A8K2U0 1454 aa28.32■■■□□ 2.12
GTPBP3-228ENST00000602165 PTPRTO14522 1441 aa28.31■■■□□ 2.12
GTPBP3-228ENST00000602165 PRDM15P57071 1507 aaPredicted RBP28.3■■■□□ 2.12
GTPBP3-228ENST00000602165 ANKRD30AQ9BXX3 1397 aa28.3■■■□□ 2.12
GTPBP3-228ENST00000602165 DEPDC5O75140 1603 aa28.29■■■□□ 2.12
GTPBP3-228ENST00000602165 PPARGC1BQ86YN6 1023 aaKnown RBP28.27■■■□□ 2.12
GTPBP3-228ENST00000602165 PLA2R1Q13018 1463 aa28.27■■■□□ 2.12
GTPBP3-228ENST00000602165 FBXO41Q8TF61 875 aa28.26■■■□□ 2.11
GTPBP3-228ENST00000602165 ADGRL2O95490 1459 aa28.26■■■□□ 2.11
GTPBP3-228ENST00000602165 NCKAP5LQ9HCH0 1330 aa28.25■■■□□ 2.11
GTPBP3-228ENST00000602165 SPATA31D1Q6ZQQ2 1576 aa28.24■■■□□ 2.11
GTPBP3-228ENST00000602165 CERKQ8TCT0 537 aa28.22■■■□□ 2.11
GTPBP3-228ENST00000602165 ERVK-7P63135 1459 aa28.21■■■□□ 2.11
GTPBP3-228ENST00000602165 POLR1AO95602 1720 aaPredicted RBP28.21■■■□□ 2.11
GTPBP3-228ENST00000602165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.21■■■□□ 2.112e-6■■□□□ 14.2
GTPBP3-228ENST00000602165 NLRP1Q9C000 1473 aa28.21■■■□□ 2.11
GTPBP3-228ENST00000602165 UGGT1Q9NYU2 1555 aa28.17■■■□□ 2.1
GTPBP3-228ENST00000602165 PKD2Q13563 968 aa28.17■■■□□ 2.1
GTPBP3-228ENST00000602165 KANK1Q14678 1352 aa28.15■■■□□ 2.1
GTPBP3-228ENST00000602165 VWDEQ8N2E2 1590 aa28.14■■■□□ 2.1
GTPBP3-228ENST00000602165 LTBP4Q8N2S1 1624 aa28.14■■■□□ 2.09
GTPBP3-228ENST00000602165 ARHGAP31Q2M1Z3 1444 aa28.13■■■□□ 2.09
GTPBP3-228ENST00000602165 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.11■■■□□ 2.09
GTPBP3-228ENST00000602165 NEURL4Q96JN8 1562 aa28.11■■■□□ 2.09
GTPBP3-228ENST00000602165 ANKRD50Q9ULJ7 1429 aa28.11■■■□□ 2.09
GTPBP3-228ENST00000602165 LMTK2Q8IWU2 1503 aa28.1■■■□□ 2.09
GTPBP3-228ENST00000602165 UBR1Q8IWV7 1749 aa28.09■■■□□ 2.09
GTPBP3-228ENST00000602165 THEMISQ8N1K5 641 aaPredicted RBP28.08■■■□□ 2.09
GTPBP3-228ENST00000602165 ITGAEP38570 1179 aa28.05■■■□□ 2.08
GTPBP3-228ENST00000602165 EFCAB6Q5THR3 1501 aa28.05■■■□□ 2.08
GTPBP3-228ENST00000602165 ZNF335Q9H4Z2 1342 aaPredicted RBP28.05■■■□□ 2.08
GTPBP3-228ENST00000602165 ROCK1Q13464 1354 aa28.03■■■□□ 2.08
GTPBP3-228ENST00000602165 UNC13BO14795 1591 aa28.03■■■□□ 2.08
GTPBP3-228ENST00000602165 ANKLE2Q86XL3 938 aa28.02■■■□□ 2.08
GTPBP3-228ENST00000602165 PIK3C2BO00750 1634 aa28.02■■■□□ 2.08
GTPBP3-228ENST00000602165 TET3O43151 1660 aa27.99■■■□□ 2.07
GTPBP3-228ENST00000602165 IQGAP1P46940 1657 aa27.99■■■□□ 2.07
GTPBP3-228ENST00000602165 SYNMO15061 1565 aa27.99■■■□□ 2.07
GTPBP3-228ENST00000602165 GCC2Q8IWJ2 1684 aa27.97■■■□□ 2.07
GTPBP3-228ENST00000602165 MED14O60244 1454 aa27.96■■■□□ 2.07
GTPBP3-228ENST00000602165 NPHP4O75161 1426 aaPredicted RBP27.96■■■□□ 2.07
GTPBP3-228ENST00000602165 RRBP1Q9P2E9 1410 aaKnown RBP27.95■■■□□ 2.07
GTPBP3-228ENST00000602165 IQSEC2Q5JU85 1478 aa27.95■■■□□ 2.06
GTPBP3-228ENST00000602165 NOS1P29475 1434 aa27.92■■■□□ 2.06
GTPBP3-228ENST00000602165 KDM5AP29375 1690 aaKnown RBP27.92■■■□□ 2.06
GTPBP3-228ENST00000602165 IQGAP3Q86VI3 1631 aa27.91■■■□□ 2.06
GTPBP3-228ENST00000602165 SLIT1O75093 1534 aa27.91■■■□□ 2.06
GTPBP3-228ENST00000602165 RPRD2Q5VT52 1461 aaKnown RBP27.9■■■□□ 2.06
GTPBP3-228ENST00000602165 E9PCH4 1651 aa27.9■■■□□ 2.06
GTPBP3-228ENST00000602165 ARHGAP23Q9P227 1491 aa27.89■■■□□ 2.06
GTPBP3-228ENST00000602165 SCAF11Q99590 1463 aaKnown RBP27.89■■■□□ 2.05
GTPBP3-228ENST00000602165 IDI1Q13907 227 aa27.88■■■□□ 2.05
GTPBP3-228ENST00000602165 STAG3Q9UJ98 1225 aa27.87■■■□□ 2.05
GTPBP3-228ENST00000602165 MYO5BQ9ULV0 1848 aa27.85■■■□□ 2.05
GTPBP3-228ENST00000602165 ADGRB3O60242 1522 aa27.85■■■□□ 2.05
GTPBP3-228ENST00000602165 CPS1P31327 1500 aa27.84■■■□□ 2.05
GTPBP3-228ENST00000602165 LTKP29376 864 aa27.84■■■□□ 2.05
GTPBP3-228ENST00000602165 STRCP1A6NGW2 1772 aa27.83■■■□□ 2.05
GTPBP3-228ENST00000602165 TXNDC2Q86VQ3 553 aa27.83■■■□□ 2.05
GTPBP3-228ENST00000602165 NUP155O75694 1391 aa27.82■■■□□ 2.04
GTPBP3-228ENST00000602165 TMEM2Q9UHN6 1383 aa27.82■■■□□ 2.04
GTPBP3-228ENST00000602165 SLC52A1Q9NWF4 448 aa27.79■■■□□ 2.04
GTPBP3-228ENST00000602165 EID1Q9Y6B2 187 aa27.79■■■□□ 2.04
GTPBP3-228ENST00000602165 NAIPQ13075 1403 aa27.75■■■□□ 2.03
GTPBP3-228ENST00000602165 TMEM131LA2VDJ0 1609 aa27.74■■■□□ 2.03
GTPBP3-228ENST00000602165 UBAP1LF5GYI3 381 aa27.74■■■□□ 2.03
GTPBP3-228ENST00000602165 SPHKAPQ2M3C7 1700 aa27.7■■■□□ 2.03
GTPBP3-228ENST00000602165 LRRC7Q96NW7 1537 aa27.67■■■□□ 2.02
GTPBP3-228ENST00000602165 HFM1A2PYH4 1435 aa27.66■■■□□ 2.02
GTPBP3-228ENST00000602165 ZFYVE9O95405 1425 aa27.66■■■□□ 2.02
GTPBP3-228ENST00000602165 CHGAP10645 457 aaKnown RBP27.65■■■□□ 2.02
GTPBP3-228ENST00000602165 RIMS2Q9UQ26 1411 aa27.64■■■□□ 2.02
GTPBP3-228ENST00000602165 XIRP1Q702N8 1843 aaKnown RBP27.63■■■□□ 2.01
GTPBP3-228ENST00000602165 SLC26A8Q96RN1 970 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms