RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 EIF2AK4Q9P2K8 1649 aaKnown RBP25.68■■□□□ 1.7
DDX49-213ENST00000602113 SLC4A1APQ9BWU0 796 aaKnown RBP25.67■■□□□ 1.7
DDX49-213ENST00000602113 KIF3BO15066 747 aa25.65■■□□□ 1.7
DDX49-213ENST00000602113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.65■■□□□ 1.73e-6■■■■□ 20.1
DDX49-213ENST00000602113 ZEB1P37275 1124 aaPredicted RBP25.64■■□□□ 1.69
DDX49-213ENST00000602113 DEPDC5O75140 1603 aa25.63■■□□□ 1.69
DDX49-213ENST00000602113 ATP10AO60312 1499 aa25.63■■□□□ 1.69
DDX49-213ENST00000602113 FAM135AQ9P2D6 1515 aa25.62■■□□□ 1.69
DDX49-213ENST00000602113 FOXD1Q16676 465 aa25.6■■□□□ 1.69
DDX49-213ENST00000602113 IQGAP3Q86VI3 1631 aa25.6■■□□□ 1.69
DDX49-213ENST00000602113 MROH1Q8NDA8 1641 aa25.6■■□□□ 1.69
DDX49-213ENST00000602113 ARHGEF40Q8TER5 1519 aa25.6■■□□□ 1.69
DDX49-213ENST00000602113 BCORL1Q5H9F3 1711 aa25.59■■□□□ 1.69
DDX49-213ENST00000602113 RNF17Q9BXT8 1623 aaKnown RBP25.58■■□□□ 1.69
DDX49-213ENST00000602113 PKD2Q13563 968 aa25.58■■□□□ 1.68
DDX49-213ENST00000602113 PRDM15P57071 1507 aaPredicted RBP25.57■■□□□ 1.68
DDX49-213ENST00000602113 REREQ9P2R6 1566 aa25.57■■□□□ 1.68
DDX49-213ENST00000602113 VWDEQ8N2E2 1590 aa25.56■■□□□ 1.68
DDX49-213ENST00000602113 SIN3AQ96ST3 1273 aa25.55■■□□□ 1.68
DDX49-213ENST00000602113 ANKRD30BQ9BXX2 1392 aa25.52■■□□□ 1.68
DDX49-213ENST00000602113 KANK1Q14678 1352 aa25.52■■□□□ 1.68
DDX49-213ENST00000602113 GGT6Q6P531 493 aa25.51■■□□□ 1.67
DDX49-213ENST00000602113 SIGLEC1Q9BZZ2 1709 aa25.5■■□□□ 1.67
DDX49-213ENST00000602113 AGLP35573 1532 aa25.5■■□□□ 1.67
DDX49-213ENST00000602113 NEUROD1Q13562 356 aa25.48■■□□□ 1.67
DDX49-213ENST00000602113 LMTK2Q8IWU2 1503 aa25.44■■□□□ 1.66
DDX49-213ENST00000602113 TET3O43151 1660 aa25.44■■□□□ 1.66
DDX49-213ENST00000602113 ABCC3O15438 1527 aa25.42■■□□□ 1.66
DDX49-213ENST00000602113 CEP152O94986 1710 aa25.41■■□□□ 1.66
DDX49-213ENST00000602113 E9PCH4 1651 aa25.41■■□□□ 1.66
DDX49-213ENST00000602113 PLA2R1Q13018 1463 aa25.4■■□□□ 1.66
DDX49-213ENST00000602113 WASHC2CQ9Y4E1 1318 aa25.39■■□□□ 1.66
DDX49-213ENST00000602113 EFCAB6Q5THR3 1501 aa25.39■■□□□ 1.65
DDX49-213ENST00000602113 RPRD2Q5VT52 1461 aaKnown RBP25.37■■□□□ 1.65
DDX49-213ENST00000602113 MLECQ14165 292 aa25.33■■□□□ 1.65
DDX49-213ENST00000602113 TIMELESSQ9UNS1 1208 aa25.33■■□□□ 1.65
DDX49-213ENST00000602113 ZC3H13Q5T200 1668 aaKnown RBP25.33■■□□□ 1.65
DDX49-213ENST00000602113 PPP6R1Q9UPN7 881 aa25.32■■□□□ 1.64
DDX49-213ENST00000602113 PTPRTO14522 1441 aa25.32■■□□□ 1.64
DDX49-213ENST00000602113 ARID4BQ4LE39 1312 aaPredicted RBP25.32■■□□□ 1.64
DDX49-213ENST00000602113 CAMSAP1Q5T5Y3 1602 aa25.32■■□□□ 1.64
DDX49-213ENST00000602113 NPATQ14207 1427 aa25.31■■□□□ 1.64
DDX49-213ENST00000602113 TONSLQ96HA7 1378 aa25.3■■□□□ 1.64
DDX49-213ENST00000602113 CCDC144AA2RUR9 1427 aa25.27■■□□□ 1.64
DDX49-213ENST00000602113 ARHGAP31Q2M1Z3 1444 aa25.27■■□□□ 1.64
DDX49-213ENST00000602113 SPHKAPQ2M3C7 1700 aa25.27■■□□□ 1.64
DDX49-213ENST00000602113 TRPM2O94759 1503 aa25.27■■□□□ 1.64
DDX49-213ENST00000602113 CLTCQ00610 1675 aaKnown RBP25.24■■□□□ 1.63
DDX49-213ENST00000602113 L3MBTL2Q969R5 705 aa25.22■■□□□ 1.63
DDX49-213ENST00000602113 PPP1R15AO75807 674 aaPredicted RBP25.2■■□□□ 1.63
DDX49-213ENST00000602113 CLTCL1P53675 1640 aa25.2■■□□□ 1.62
DDX49-213ENST00000602113 NOS1P29475 1434 aa25.19■■□□□ 1.62
DDX49-213ENST00000602113 CNTLNQ9NXG0 1405 aa25.18■■□□□ 1.62
DDX49-213ENST00000602113 UGGT1Q9NYU2 1555 aa25.18■■□□□ 1.62
DDX49-213ENST00000602113 ESF1Q9H501 851 aaKnown RBP25.17■■□□□ 1.62
DDX49-213ENST00000602113 CFAP65Q6ZU64 1925 aaKnown RBP25.16■■□□□ 1.62
DDX49-213ENST00000602113 FBXO31Q5XUX0 539 aaPredicted RBP25.14■■□□□ 1.62
DDX49-213ENST00000602113 SYNMO15061 1565 aa25.14■■□□□ 1.62
DDX49-213ENST00000602113 ZMYM3Q14202 1370 aa25.13■■□□□ 1.61
DDX49-213ENST00000602113 SPATA31E1Q6ZUB1 1445 aa25.13■■□□□ 1.61
DDX49-213ENST00000602113 PREX1Q8TCU6 1659 aa25.13■■□□□ 1.61
DDX49-213ENST00000602113 ERVK-7P63135 1459 aa25.12■■□□□ 1.61
DDX49-213ENST00000602113 RGL3Q3MIN7 710 aa25.1■■□□□ 1.61
DDX49-213ENST00000602113 PIK3C2BO00750 1634 aa25.08■■□□□ 1.61
DDX49-213ENST00000602113 MROH2AA6NES4 1674 aa25.08■■□□□ 1.6
DDX49-213ENST00000602113 SPATA31D1Q6ZQQ2 1576 aa25.07■■□□□ 1.6
DDX49-213ENST00000602113 FER1L4A9Z1Z3 1794 aa25.06■■□□□ 1.6
DDX49-213ENST00000602113 NEURL4Q96JN8 1562 aa25.05■■□□□ 1.6
DDX49-213ENST00000602113 DCAF11Q8TEB1 546 aa25.04■■□□□ 1.6
DDX49-213ENST00000602113 IDI1Q13907 227 aa25.04■■□□□ 1.6
DDX49-213ENST00000602113 NBPF8Q3BBV2 869 aa25.04■■□□□ 1.6
DDX49-213ENST00000602113 SLC52A1Q9NWF4 448 aa25.03■■□□□ 1.6
DDX49-213ENST00000602113 ADGRB3O60242 1522 aa25.02■■□□□ 1.6
DDX49-213ENST00000602113 KIF1BO60333 1816 aa25.02■■□□□ 1.6
DDX49-213ENST00000602113 KDM2AQ9Y2K7 1162 aa25.01■■□□□ 1.59
DDX49-213ENST00000602113 MADDQ8WXG6 1647 aa25.01■■□□□ 1.59
DDX49-213ENST00000602113 ADAMTSL3P82987 1691 aa25.01■■□□□ 1.59
DDX49-213ENST00000602113 CEBPAP49715 358 aaPredicted RBP25■■□□□ 1.59
DDX49-213ENST00000602113 UHRF1BP1Q6BDS2 1440 aa25■■□□□ 1.59
DDX49-213ENST00000602113 CHGAP10645 457 aaKnown RBP24.99■■□□□ 1.59
DDX49-213ENST00000602113 C3P01024 1663 aa24.98■■□□□ 1.59
DDX49-213ENST00000602113 ZNF326Q5BKZ1 582 aaKnown RBP24.96■■□□□ 1.59
DDX49-213ENST00000602113 TNRQ92752 1358 aa24.96■■□□□ 1.59
DDX49-213ENST00000602113 RIMS1Q86UR5 1692 aaKnown RBP24.95■■□□□ 1.58
DDX49-213ENST00000602113 PRAG1Q86YV5 1406 aa24.93■■□□□ 1.58
DDX49-213ENST00000602113 TMEM131LA2VDJ0 1609 aa24.93■■□□□ 1.58
DDX49-213ENST00000602113 PLPPR3Q6T4P5 718 aa24.9■■□□□ 1.58
DDX49-213ENST00000602113 IFT172Q9UG01 1749 aa24.9■■□□□ 1.58
DDX49-213ENST00000602113 STAC3Q96MF2 364 aa24.89■■□□□ 1.58
DDX49-213ENST00000602113 RPGRIP1LQ68CZ1 1315 aa24.88■■□□□ 1.57
DDX49-213ENST00000602113 MYOM2P54296 1465 aa24.87■■□□□ 1.57
DDX49-213ENST00000602113 MYO5BQ9ULV0 1848 aa24.87■■□□□ 1.57
DDX49-213ENST00000602113 RALGAPBQ86X10 1494 aa24.87■■□□□ 1.57
DDX49-213ENST00000602113 A2ML1A8K2U0 1454 aa24.86■■□□□ 1.57
DDX49-213ENST00000602113 PPLO60437 1756 aa24.85■■□□□ 1.57
DDX49-213ENST00000602113 NEXMIFQ5QGS0 1516 aa24.85■■□□□ 1.57
DDX49-213ENST00000602113 ADGRF5Q8IZF2 1346 aa24.85■■□□□ 1.57
DDX49-213ENST00000602113 STAG3Q9UJ98 1225 aa24.84■■□□□ 1.57
DDX49-213ENST00000602113 NLRP1Q9C000 1473 aa24.83■■□□□ 1.57
DDX49-213ENST00000602113 NRXN1Q9ULB1 1477 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms