RNA–Protein interactions for RNA: ENST00000601978.1

SUPT5H-220, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-220ENST00000601978 FAM135AQ9P2D6 1515 aa21.51■■□□□ 1.03
SUPT5H-220ENST00000601978 KIF3BO15066 747 aa21.51■■□□□ 1.03
SUPT5H-220ENST00000601978 TNRQ92752 1358 aa21.49■■□□□ 1.03
SUPT5H-220ENST00000601978 CCDC141Q6ZP82 1450 aa21.49■■□□□ 1.03
SUPT5H-220ENST00000601978 PZPP20742 1482 aa21.48■■□□□ 1.03
SUPT5H-220ENST00000601978 FBXO31Q5XUX0 539 aaPredicted RBP21.48■■□□□ 1.03
SUPT5H-220ENST00000601978 KDM5DQ9BY66 1539 aa21.46■■□□□ 1.03
SUPT5H-220ENST00000601978 WASHC2CQ9Y4E1 1318 aa21.45■■□□□ 1.02
SUPT5H-220ENST00000601978 NCOA2Q15596 1464 aa21.45■■□□□ 1.02
SUPT5H-220ENST00000601978 CAMSAP2Q08AD1 1489 aa21.44■■□□□ 1.02
SUPT5H-220ENST00000601978 THEMISQ8N1K5 641 aaPredicted RBP21.43■■□□□ 1.02
SUPT5H-220ENST00000601978 MIA2Q96PC5 1412 aa21.43■■□□□ 1.02
SUPT5H-220ENST00000601978 CPS1P31327 1500 aa21.43■■□□□ 1.02
SUPT5H-220ENST00000601978 NEURL4Q96JN8 1562 aa21.43■■□□□ 1.02
SUPT5H-220ENST00000601978 ANKLE2Q86XL3 938 aa21.42■■□□□ 1.02
SUPT5H-220ENST00000601978 POLR1AO95602 1720 aaPredicted RBP21.41■■□□□ 1.02
SUPT5H-220ENST00000601978 SHANK2Q9UPX8 1470 aa21.41■■□□□ 1.02
SUPT5H-220ENST00000601978 NLRP1Q9C000 1473 aa21.4■■□□□ 1.02
SUPT5H-220ENST00000601978 TSPY4P0CV99 314 aa21.4■■□□□ 1.02
SUPT5H-220ENST00000601978 TSPY10P0CW01 314 aa21.4■■□□□ 1.02
SUPT5H-220ENST00000601978 ARHGEF5Q12774 1597 aa21.4■■□□□ 1.02
SUPT5H-220ENST00000601978 TOM1O60784 492 aa21.39■■□□□ 1.01
SUPT5H-220ENST00000601978 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.38■■□□□ 1.01
SUPT5H-220ENST00000601978 MED14O60244 1454 aa21.38■■□□□ 1.01
SUPT5H-220ENST00000601978 HSPA1LP34931 641 aa21.35■■□□□ 1.01
SUPT5H-220ENST00000601978 DEPDC5O75140 1603 aa21.35■■□□□ 1.01
SUPT5H-220ENST00000601978 UGGT1Q9NYU2 1555 aa21.35■■□□□ 1.01
SUPT5H-220ENST00000601978 VWDEQ8N2E2 1590 aa21.34■■□□□ 1.01
SUPT5H-220ENST00000601978 NPHP4O75161 1426 aaPredicted RBP21.33■■□□□ 1.01
SUPT5H-220ENST00000601978 PIP4K2BP78356 416 aa21.33■■□□□ 1.01
SUPT5H-220ENST00000601978 SCAF1Q9H7N4 1312 aaKnown RBP21.31■■□□□ 1
SUPT5H-220ENST00000601978 RNF17Q9BXT8 1623 aaKnown RBP21.31■■□□□ 1
SUPT5H-220ENST00000601978 MAST1Q9Y2H9 1570 aa21.3■■□□□ 1
SUPT5H-220ENST00000601978 ABCC3O15438 1527 aa21.29■■□□□ 1
SUPT5H-220ENST00000601978 LRRC9Q6ZRR7 1453 aa21.29■■□□□ 1
SUPT5H-220ENST00000601978 ZC3H13Q5T200 1668 aaKnown RBP21.27■■□□□ 1
SUPT5H-220ENST00000601978 MED1Q15648 1581 aaPredicted RBP21.26■□□□□ 0.99
SUPT5H-220ENST00000601978 ERVK-7P63135 1459 aa21.26■□□□□ 0.99
SUPT5H-220ENST00000601978 EIF2AK4Q9P2K8 1649 aaKnown RBP21.26■□□□□ 0.99
SUPT5H-220ENST00000601978 VPS8Q8N3P4 1428 aa21.25■□□□□ 0.99
SUPT5H-220ENST00000601978 ALKQ9UM73 1620 aa21.25■□□□□ 0.99
SUPT5H-220ENST00000601978 IQGAP1P46940 1657 aa21.24■□□□□ 0.99
SUPT5H-220ENST00000601978 MAP3K1Q13233 1512 aa21.23■□□□□ 0.99
SUPT5H-220ENST00000601978 MROH1Q8NDA8 1641 aa21.22■□□□□ 0.99
SUPT5H-220ENST00000601978 LRRC7Q96NW7 1537 aa21.21■□□□□ 0.99
SUPT5H-220ENST00000601978 KANK4Q5T7N3 995 aaPredicted RBP21.2■□□□□ 0.98
SUPT5H-220ENST00000601978 MYOM3Q5VTT5 1437 aa21.2■□□□□ 0.98
SUPT5H-220ENST00000601978 DUOX2Q9NRD8 1548 aa21.19■□□□□ 0.98
SUPT5H-220ENST00000601978 STRCP1A6NGW2 1772 aa21.18■□□□□ 0.98
SUPT5H-220ENST00000601978 ARHGAP31Q2M1Z3 1444 aa21.18■□□□□ 0.98
SUPT5H-220ENST00000601978 UBR1Q8IWV7 1749 aa21.16■□□□□ 0.98
SUPT5H-220ENST00000601978 SYNMO15061 1565 aa21.16■□□□□ 0.98
SUPT5H-220ENST00000601978 SCAF11Q99590 1463 aaKnown RBP21.16■□□□□ 0.98
SUPT5H-220ENST00000601978 ARHGAP23Q9P227 1491 aa21.16■□□□□ 0.98
SUPT5H-220ENST00000601978 SLIT1O75093 1534 aa21.14■□□□□ 0.98
SUPT5H-220ENST00000601978 CFAP65Q6ZU64 1925 aaKnown RBP21.14■□□□□ 0.98
SUPT5H-220ENST00000601978 LTKP29376 864 aa21.14■□□□□ 0.97
SUPT5H-220ENST00000601978 CEP152O94986 1710 aa21.14■□□□□ 0.97
SUPT5H-220ENST00000601978 TXNDC2Q86VQ3 553 aa21.13■□□□□ 0.97
SUPT5H-220ENST00000601978 KIF15Q9NS87 1388 aa21.12■□□□□ 0.97
SUPT5H-220ENST00000601978 PRDM15P57071 1507 aaPredicted RBP21.12■□□□□ 0.97
SUPT5H-220ENST00000601978 LOC105371045A0A1W2PR82 267 aa21.11■□□□□ 0.97
SUPT5H-220ENST00000601978 PHF23Q9BUL5 403 aaPredicted RBP21.11■□□□□ 0.97
SUPT5H-220ENST00000601978 ERBINQ96RT1 1412 aa21.11■□□□□ 0.97
SUPT5H-220ENST00000601978 EID1Q9Y6B2 187 aa21.09■□□□□ 0.97
SUPT5H-220ENST00000601978 ABCC5O15440 1437 aa21.09■□□□□ 0.97
SUPT5H-220ENST00000601978 RRP7BPQ9NSQ0 103 aa21.07■□□□□ 0.96
SUPT5H-220ENST00000601978 TMEM2Q9UHN6 1383 aa21.06■□□□□ 0.96
SUPT5H-220ENST00000601978 KANK1Q14678 1352 aa21.03■□□□□ 0.96
SUPT5H-220ENST00000601978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.03■□□□□ 0.967e-15■■□□□ 12.9
SUPT5H-220ENST00000601978 CROCC2H7BZ55 1655 aa21.02■□□□□ 0.96
SUPT5H-220ENST00000601978 PTPN23Q9H3S7 1636 aa21.02■□□□□ 0.96
SUPT5H-220ENST00000601978 DAPK1P53355 1430 aa21.02■□□□□ 0.96
SUPT5H-220ENST00000601978 FAM135BQ49AJ0 1406 aa21.02■□□□□ 0.96
SUPT5H-220ENST00000601978 KDM5AP29375 1690 aaKnown RBP21.02■□□□□ 0.95
SUPT5H-220ENST00000601978 PIK3C2BO00750 1634 aa21.01■□□□□ 0.95
SUPT5H-220ENST00000601978 LMTK2Q8IWU2 1503 aa21.01■□□□□ 0.95
SUPT5H-220ENST00000601978 IDI1Q13907 227 aa21.01■□□□□ 0.95
SUPT5H-220ENST00000601978 XIRP1Q702N8 1843 aaKnown RBP21.01■□□□□ 0.95
SUPT5H-220ENST00000601978 SENP3Q9H4L4 574 aaPredicted RBP21■□□□□ 0.95
SUPT5H-220ENST00000601978 STAG3Q9UJ98 1225 aa21■□□□□ 0.95
SUPT5H-220ENST00000601978 KCNA6P17658 529 aa20.98■□□□□ 0.95
SUPT5H-220ENST00000601978 EFCAB6Q5THR3 1501 aa20.98■□□□□ 0.95
SUPT5H-220ENST00000601978 ANKRD30AQ9BXX3 1397 aa20.97■□□□□ 0.95
SUPT5H-220ENST00000601978 FGD6Q6ZV73 1430 aa20.97■□□□□ 0.95
SUPT5H-220ENST00000601978 RGS17Q9UGC6 210 aaPredicted RBP20.97■□□□□ 0.95
SUPT5H-220ENST00000601978 APLP2Q06481 763 aa20.96■□□□□ 0.95
SUPT5H-220ENST00000601978 TMEM94Q12767 1356 aa20.96■□□□□ 0.95
SUPT5H-220ENST00000601978 TET3O43151 1660 aa20.96■□□□□ 0.95
SUPT5H-220ENST00000601978 NOS1P29475 1434 aa20.95■□□□□ 0.95
SUPT5H-220ENST00000601978 SLC52A1Q9NWF4 448 aa20.93■□□□□ 0.94
SUPT5H-220ENST00000601978 PROSER2Q86WR7 435 aaPredicted RBP20.92■□□□□ 0.94
SUPT5H-220ENST00000601978 CHIC2Q9UKJ5 165 aa20.92■□□□□ 0.94
SUPT5H-220ENST00000601978 SLC26A8Q96RN1 970 aa20.91■□□□□ 0.94
SUPT5H-220ENST00000601978 ADGRB3O60242 1522 aa20.88■□□□□ 0.93
SUPT5H-220ENST00000601978 ADGRL2O95490 1459 aa20.88■□□□□ 0.93
SUPT5H-220ENST00000601978 NKTRP30414 1462 aaKnown RBP20.88■□□□□ 0.93
SUPT5H-220ENST00000601978 NWD1Q149M9 1564 aa20.87■□□□□ 0.93
SUPT5H-220ENST00000601978 RPRD2Q5VT52 1461 aaKnown RBP20.87■□□□□ 0.93
SUPT5H-220ENST00000601978 ROBO1Q9Y6N7 1651 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms