RNA–Protein interactions for RNA: ENST00000601881.1

SIPA1L3-212, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 2

Gene SIPA1L3, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-212ENST00000601881 UHRF1BP1Q6BDS2 1440 aa23.94■■□□□ 1.42
SIPA1L3-212ENST00000601881 WASHC2CQ9Y4E1 1318 aa23.94■■□□□ 1.42
SIPA1L3-212ENST00000601881 PREX1Q8TCU6 1659 aa23.94■■□□□ 1.42
SIPA1L3-212ENST00000601881 ANKRD30AQ9BXX3 1397 aa23.93■■□□□ 1.42
SIPA1L3-212ENST00000601881 KDM5DQ9BY66 1539 aa23.92■■□□□ 1.42
SIPA1L3-212ENST00000601881 PTPRKQ15262 1439 aa23.91■■□□□ 1.42
SIPA1L3-212ENST00000601881 NCOA1Q15788 1441 aa23.91■■□□□ 1.42
SIPA1L3-212ENST00000601881 RNF17Q9BXT8 1623 aaKnown RBP23.9■■□□□ 1.42
SIPA1L3-212ENST00000601881 NPATQ14207 1427 aa23.9■■□□□ 1.42
SIPA1L3-212ENST00000601881 EIF2AK4Q9P2K8 1649 aaKnown RBP23.89■■□□□ 1.42
SIPA1L3-212ENST00000601881 ITGAEP38570 1179 aa23.89■■□□□ 1.41
SIPA1L3-212ENST00000601881 ERBINQ96RT1 1412 aa23.89■■□□□ 1.41
SIPA1L3-212ENST00000601881 FBXO31Q5XUX0 539 aaPredicted RBP23.88■■□□□ 1.41
SIPA1L3-212ENST00000601881 MROH1Q8NDA8 1641 aa23.87■■□□□ 1.41
SIPA1L3-212ENST00000601881 ADGRL2O95490 1459 aa23.87■■□□□ 1.41
SIPA1L3-212ENST00000601881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.86■■□□□ 1.41
SIPA1L3-212ENST00000601881 SETD1BQ9UPS6 1966 aaKnown RBP23.85■■□□□ 1.41
SIPA1L3-212ENST00000601881 ABCC3O15438 1527 aa23.85■■□□□ 1.41
SIPA1L3-212ENST00000601881 FAM135AQ9P2D6 1515 aa23.84■■□□□ 1.41
SIPA1L3-212ENST00000601881 PZPP20742 1482 aa23.82■■□□□ 1.4
SIPA1L3-212ENST00000601881 TNRQ92752 1358 aa23.79■■□□□ 1.4
SIPA1L3-212ENST00000601881 MYO3AQ8NEV4 1616 aa23.79■■□□□ 1.4
SIPA1L3-212ENST00000601881 PRDM15P57071 1507 aaPredicted RBP23.79■■□□□ 1.4
SIPA1L3-212ENST00000601881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.78■■□□□ 1.4
SIPA1L3-212ENST00000601881 RRBP1Q9P2E9 1410 aaKnown RBP23.77■■□□□ 1.4
SIPA1L3-212ENST00000601881 ANKRD50Q9ULJ7 1429 aa23.77■■□□□ 1.4
SIPA1L3-212ENST00000601881 CEP152O94986 1710 aa23.77■■□□□ 1.4
SIPA1L3-212ENST00000601881 ZC3H13Q5T200 1668 aaKnown RBP23.76■■□□□ 1.39
SIPA1L3-212ENST00000601881 DEPDC5O75140 1603 aa23.74■■□□□ 1.39
SIPA1L3-212ENST00000601881 ROCK1Q13464 1354 aa23.74■■□□□ 1.39
SIPA1L3-212ENST00000601881 KANK1Q14678 1352 aa23.74■■□□□ 1.39
SIPA1L3-212ENST00000601881 CEP170BQ9Y4F5 1589 aaPredicted RBP23.74■■□□□ 1.39
SIPA1L3-212ENST00000601881 CAMSAP1Q5T5Y3 1602 aa23.73■■□□□ 1.39
SIPA1L3-212ENST00000601881 STRCQ7RTU9 1775 aa23.71■■□□□ 1.39
SIPA1L3-212ENST00000601881 ZNF142P52746 1687 aaPredicted RBP23.7■■□□□ 1.39
SIPA1L3-212ENST00000601881 A2ML1A8K2U0 1454 aa23.7■■□□□ 1.38
SIPA1L3-212ENST00000601881 ERVK-7P63135 1459 aa23.7■■□□□ 1.38
SIPA1L3-212ENST00000601881 NCKAP5LQ9HCH0 1330 aa23.68■■□□□ 1.38
SIPA1L3-212ENST00000601881 SPATA31D1Q6ZQQ2 1576 aa23.67■■□□□ 1.38
SIPA1L3-212ENST00000601881 VWDEQ8N2E2 1590 aa23.67■■□□□ 1.38
SIPA1L3-212ENST00000601881 ARHGAP31Q2M1Z3 1444 aa23.66■■□□□ 1.38
SIPA1L3-212ENST00000601881 LMTK2Q8IWU2 1503 aa23.64■■□□□ 1.38
SIPA1L3-212ENST00000601881 NLRP1Q9C000 1473 aa23.63■■□□□ 1.37
SIPA1L3-212ENST00000601881 DMRT2Q9Y5R5 561 aa23.63■■□□□ 1.37
SIPA1L3-212ENST00000601881 CFAP65Q6ZU64 1925 aaKnown RBP23.62■■□□□ 1.37
SIPA1L3-212ENST00000601881 PLA2R1Q13018 1463 aa23.6■■□□□ 1.37
SIPA1L3-212ENST00000601881 PTPRTO14522 1441 aa23.59■■□□□ 1.37
SIPA1L3-212ENST00000601881 EFCAB6Q5THR3 1501 aa23.59■■□□□ 1.37
SIPA1L3-212ENST00000601881 UNC13BO14795 1591 aa23.59■■□□□ 1.37
SIPA1L3-212ENST00000601881 UGGT1Q9NYU2 1555 aa23.59■■□□□ 1.37
SIPA1L3-212ENST00000601881 PKD2Q13563 968 aa23.57■■□□□ 1.36
SIPA1L3-212ENST00000601881 THEMISQ8N1K5 641 aaPredicted RBP23.57■■□□□ 1.36
SIPA1L3-212ENST00000601881 NUP155O75694 1391 aa23.55■■□□□ 1.36
SIPA1L3-212ENST00000601881 NAIPQ13075 1403 aa23.54■■□□□ 1.36
SIPA1L3-212ENST00000601881 ILDR1Q86SU0 546 aaPredicted RBP23.52■■□□□ 1.36
SIPA1L3-212ENST00000601881 SYNMO15061 1565 aa23.52■■□□□ 1.36
SIPA1L3-212ENST00000601881 NOS1P29475 1434 aa23.51■■□□□ 1.35
SIPA1L3-212ENST00000601881 TET3O43151 1660 aa23.51■■□□□ 1.35
SIPA1L3-212ENST00000601881 IDI1Q13907 227 aa23.5■■□□□ 1.35
SIPA1L3-212ENST00000601881 ANKLE2Q86XL3 938 aa23.5■■□□□ 1.35
SIPA1L3-212ENST00000601881 IQGAP3Q86VI3 1631 aa23.49■■□□□ 1.35
SIPA1L3-212ENST00000601881 HFM1A2PYH4 1435 aa23.48■■□□□ 1.35
SIPA1L3-212ENST00000601881 RPRD2Q5VT52 1461 aaKnown RBP23.48■■□□□ 1.35
SIPA1L3-212ENST00000601881 NEURL4Q96JN8 1562 aa23.48■■□□□ 1.35
SIPA1L3-212ENST00000601881 PIK3C2BO00750 1634 aa23.48■■□□□ 1.35
SIPA1L3-212ENST00000601881 UBR1Q8IWV7 1749 aa23.47■■□□□ 1.35
SIPA1L3-212ENST00000601881 CERKQ8TCT0 537 aa23.47■■□□□ 1.35
SIPA1L3-212ENST00000601881 STAG3Q9UJ98 1225 aa23.47■■□□□ 1.35
SIPA1L3-212ENST00000601881 GCC2Q8IWJ2 1684 aa23.46■■□□□ 1.35
SIPA1L3-212ENST00000601881 ZNF335Q9H4Z2 1342 aaPredicted RBP23.46■■□□□ 1.35
SIPA1L3-212ENST00000601881 POLR1AO95602 1720 aaPredicted RBP23.44■■□□□ 1.34
SIPA1L3-212ENST00000601881 E9PCH4 1651 aa23.44■■□□□ 1.34
SIPA1L3-212ENST00000601881 NPHP4O75161 1426 aaPredicted RBP23.42■■□□□ 1.34
SIPA1L3-212ENST00000601881 LTKP29376 864 aa23.41■■□□□ 1.34
SIPA1L3-212ENST00000601881 TRIM52Q96A61 297 aa23.41■■□□□ 1.34
SIPA1L3-212ENST00000601881 SLC52A1Q9NWF4 448 aa23.41■■□□□ 1.34
SIPA1L3-212ENST00000601881 LTBP4Q8N2S1 1624 aa23.41■■□□□ 1.34
SIPA1L3-212ENST00000601881 TXNDC2Q86VQ3 553 aa23.4■■□□□ 1.34
SIPA1L3-212ENST00000601881 ARHGAP23Q9P227 1491 aa23.39■■□□□ 1.34
SIPA1L3-212ENST00000601881 FBXO41Q8TF61 875 aa23.39■■□□□ 1.33
SIPA1L3-212ENST00000601881 TMEM2Q9UHN6 1383 aa23.39■■□□□ 1.33
SIPA1L3-212ENST00000601881 MED14O60244 1454 aa23.38■■□□□ 1.33
SIPA1L3-212ENST00000601881 SCAF11Q99590 1463 aaKnown RBP23.38■■□□□ 1.33
SIPA1L3-212ENST00000601881 ADGRB3O60242 1522 aa23.38■■□□□ 1.33
SIPA1L3-212ENST00000601881 SLIT1O75093 1534 aa23.38■■□□□ 1.33
SIPA1L3-212ENST00000601881 CHGAP10645 457 aaKnown RBP23.36■■□□□ 1.33
SIPA1L3-212ENST00000601881 EID1Q9Y6B2 187 aa23.35■■□□□ 1.33
SIPA1L3-212ENST00000601881 IQGAP1P46940 1657 aa23.33■■□□□ 1.33
SIPA1L3-212ENST00000601881 SENP3Q9H4L4 574 aaPredicted RBP23.33■■□□□ 1.33
SIPA1L3-212ENST00000601881 KDM5AP29375 1690 aaKnown RBP23.31■■□□□ 1.32
SIPA1L3-212ENST00000601881 SLC4A1APQ9BWU0 796 aaKnown RBP23.3■■□□□ 1.32
SIPA1L3-212ENST00000601881 TMEM131LA2VDJ0 1609 aa23.29■■□□□ 1.32
SIPA1L3-212ENST00000601881 RIMS2Q9UQ26 1411 aa23.26■■□□□ 1.31
SIPA1L3-212ENST00000601881 NUTM2DQ5VT03 806 aaPredicted RBP23.26■■□□□ 1.31
SIPA1L3-212ENST00000601881 MYO5BQ9ULV0 1848 aa23.26■■□□□ 1.31
SIPA1L3-212ENST00000601881 SETD5Q9C0A6 1442 aa23.25■■□□□ 1.31
SIPA1L3-212ENST00000601881 SPHKAPQ2M3C7 1700 aa23.25■■□□□ 1.31
SIPA1L3-212ENST00000601881 FOXD1Q16676 465 aa23.25■■□□□ 1.31
SIPA1L3-212ENST00000601881 ZFYVE9O95405 1425 aa23.25■■□□□ 1.31
SIPA1L3-212ENST00000601881 BCANQ96GW7 911 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms