RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 NPATQ14207 1427 aa27.16■■□□□ 1.94
IRF3-230ENST00000601809 KDM5DQ9BY66 1539 aa27.15■■□□□ 1.94
IRF3-230ENST00000601809 ADGRL2O95490 1459 aa27.14■■□□□ 1.94
IRF3-230ENST00000601809 PTPRKQ15262 1439 aa27.14■■□□□ 1.93
IRF3-230ENST00000601809 KIF15Q9NS87 1388 aa27.13■■□□□ 1.93
IRF3-230ENST00000601809 NCOA1Q15788 1441 aa27.1■■□□□ 1.93
IRF3-230ENST00000601809 UHRF1BP1Q6BDS2 1440 aa27.1■■□□□ 1.93
IRF3-230ENST00000601809 ERBINQ96RT1 1412 aa27.1■■□□□ 1.93
IRF3-230ENST00000601809 HSPA2P54652 639 aa27.1■■□□□ 1.93
IRF3-230ENST00000601809 DEPDC5O75140 1603 aa27.08■■□□□ 1.93
IRF3-230ENST00000601809 ZC3H13Q5T200 1668 aaKnown RBP27.08■■□□□ 1.92
IRF3-230ENST00000601809 ABCC3O15438 1527 aa27.06■■□□□ 1.92
IRF3-230ENST00000601809 PRDM15P57071 1507 aaPredicted RBP27.06■■□□□ 1.92
IRF3-230ENST00000601809 PPARGC1BQ86YN6 1023 aaKnown RBP27.06■■□□□ 1.92
IRF3-230ENST00000601809 FAM50AQ14320 339 aaKnown RBP27.05■■□□□ 1.92
IRF3-230ENST00000601809 RRP7BPQ9NSQ0 103 aa27.05■■□□□ 1.92
IRF3-230ENST00000601809 ANKRD30AQ9BXX3 1397 aa27.05■■□□□ 1.92
IRF3-230ENST00000601809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.05■■□□□ 1.923e-6■□□□□ 11.3
IRF3-230ENST00000601809 PZPP20742 1482 aa27.05■■□□□ 1.92
IRF3-230ENST00000601809 MYO3AQ8NEV4 1616 aa27.04■■□□□ 1.92
IRF3-230ENST00000601809 ZNF142P52746 1687 aaPredicted RBP27.04■■□□□ 1.92
IRF3-230ENST00000601809 CHIC2Q9UKJ5 165 aa27.03■■□□□ 1.92
IRF3-230ENST00000601809 STRCQ7RTU9 1775 aa27.02■■□□□ 1.92
IRF3-230ENST00000601809 CEP152O94986 1710 aa27.01■■□□□ 1.91
IRF3-230ENST00000601809 WASHC2CQ9Y4E1 1318 aa27■■□□□ 1.91
IRF3-230ENST00000601809 VWDEQ8N2E2 1590 aa26.98■■□□□ 1.91
IRF3-230ENST00000601809 RRBP1Q9P2E9 1410 aaKnown RBP26.98■■□□□ 1.91
IRF3-230ENST00000601809 CAMSAP1Q5T5Y3 1602 aa26.97■■□□□ 1.91
IRF3-230ENST00000601809 CEP170BQ9Y4F5 1589 aaPredicted RBP26.96■■□□□ 1.91
IRF3-230ENST00000601809 FBXO31Q5XUX0 539 aaPredicted RBP26.95■■□□□ 1.9
IRF3-230ENST00000601809 ROCK1Q13464 1354 aa26.94■■□□□ 1.9
IRF3-230ENST00000601809 SPATA31D1Q6ZQQ2 1576 aa26.93■■□□□ 1.9
IRF3-230ENST00000601809 LMTK2Q8IWU2 1503 aa26.92■■□□□ 1.9
IRF3-230ENST00000601809 ARHGAP31Q2M1Z3 1444 aa26.9■■□□□ 1.9
IRF3-230ENST00000601809 A2ML1A8K2U0 1454 aa26.9■■□□□ 1.9
IRF3-230ENST00000601809 TNRQ92752 1358 aa26.9■■□□□ 1.9
IRF3-230ENST00000601809 ANKRD50Q9ULJ7 1429 aa26.9■■□□□ 1.9
IRF3-230ENST00000601809 ERVK-7P63135 1459 aa26.88■■□□□ 1.89
IRF3-230ENST00000601809 PLA2R1Q13018 1463 aa26.85■■□□□ 1.89
IRF3-230ENST00000601809 UNC13BO14795 1591 aa26.84■■□□□ 1.89
IRF3-230ENST00000601809 NLRP1Q9C000 1473 aa26.83■■□□□ 1.89
IRF3-230ENST00000601809 PTPRTO14522 1441 aa26.81■■□□□ 1.88
IRF3-230ENST00000601809 EFCAB6Q5THR3 1501 aa26.8■■□□□ 1.88
IRF3-230ENST00000601809 CFAP65Q6ZU64 1925 aaKnown RBP26.79■■□□□ 1.88
IRF3-230ENST00000601809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.79■■□□□ 1.885e-6■■■□□ 18.6
IRF3-230ENST00000601809 KANK1Q14678 1352 aa26.79■■□□□ 1.88
IRF3-230ENST00000601809 TET3O43151 1660 aa26.74■■□□□ 1.87
IRF3-230ENST00000601809 ITGAEP38570 1179 aa26.74■■□□□ 1.87
IRF3-230ENST00000601809 UGGT1Q9NYU2 1555 aa26.74■■□□□ 1.87
IRF3-230ENST00000601809 DMRT2Q9Y5R5 561 aa26.73■■□□□ 1.87
IRF3-230ENST00000601809 IQGAP3Q86VI3 1631 aa26.72■■□□□ 1.87
IRF3-230ENST00000601809 SYNMO15061 1565 aa26.72■■□□□ 1.87
IRF3-230ENST00000601809 NOS1P29475 1434 aa26.72■■□□□ 1.87
IRF3-230ENST00000601809 NEURL4Q96JN8 1562 aa26.71■■□□□ 1.87
IRF3-230ENST00000601809 UBR1Q8IWV7 1749 aa26.71■■□□□ 1.87
IRF3-230ENST00000601809 GCC2Q8IWJ2 1684 aa26.71■■□□□ 1.87
IRF3-230ENST00000601809 POLR1AO95602 1720 aaPredicted RBP26.7■■□□□ 1.87
IRF3-230ENST00000601809 NCKAP5LQ9HCH0 1330 aa26.7■■□□□ 1.87
IRF3-230ENST00000601809 RPRD2Q5VT52 1461 aaKnown RBP26.68■■□□□ 1.86
IRF3-230ENST00000601809 NAIPQ13075 1403 aa26.68■■□□□ 1.86
IRF3-230ENST00000601809 PKD2Q13563 968 aa26.68■■□□□ 1.86
IRF3-230ENST00000601809 PIK3C2BO00750 1634 aa26.65■■□□□ 1.86
IRF3-230ENST00000601809 E9PCH4 1651 aa26.65■■□□□ 1.86
IRF3-230ENST00000601809 KDM5AP29375 1690 aaKnown RBP26.64■■□□□ 1.86
IRF3-230ENST00000601809 LTBP4Q8N2S1 1624 aa26.64■■□□□ 1.85
IRF3-230ENST00000601809 THEMISQ8N1K5 641 aaPredicted RBP26.63■■□□□ 1.85
IRF3-230ENST00000601809 HFM1A2PYH4 1435 aa26.62■■□□□ 1.85
IRF3-230ENST00000601809 MED14O60244 1454 aa26.62■■□□□ 1.85
IRF3-230ENST00000601809 ARHGAP23Q9P227 1491 aa26.62■■□□□ 1.85
IRF3-230ENST00000601809 SLIT1O75093 1534 aa26.6■■□□□ 1.85
IRF3-230ENST00000601809 NUP155O75694 1391 aa26.58■■□□□ 1.84
IRF3-230ENST00000601809 IDI1Q13907 227 aa26.57■■□□□ 1.84
IRF3-230ENST00000601809 ILDR1Q86SU0 546 aaPredicted RBP26.56■■□□□ 1.84
IRF3-230ENST00000601809 ANKLE2Q86XL3 938 aa26.54■■□□□ 1.84
IRF3-230ENST00000601809 CERKQ8TCT0 537 aa26.54■■□□□ 1.84
IRF3-230ENST00000601809 ADGRB3O60242 1522 aa26.54■■□□□ 1.84
IRF3-230ENST00000601809 IQGAP1P46940 1657 aa26.52■■□□□ 1.84
IRF3-230ENST00000601809 NPHP4O75161 1426 aaPredicted RBP26.51■■□□□ 1.83
IRF3-230ENST00000601809 SLC52A1Q9NWF4 448 aa26.5■■□□□ 1.83
IRF3-230ENST00000601809 ZNF335Q9H4Z2 1342 aaPredicted RBP26.49■■□□□ 1.83
IRF3-230ENST00000601809 FBXO41Q8TF61 875 aa26.49■■□□□ 1.83
IRF3-230ENST00000601809 SCAF11Q99590 1463 aaKnown RBP26.49■■□□□ 1.83
IRF3-230ENST00000601809 TMEM2Q9UHN6 1383 aa26.48■■□□□ 1.83
IRF3-230ENST00000601809 TMEM131LA2VDJ0 1609 aa26.48■■□□□ 1.83
IRF3-230ENST00000601809 LTKP29376 864 aa26.48■■□□□ 1.83
IRF3-230ENST00000601809 MYO5BQ9ULV0 1848 aa26.47■■□□□ 1.83
IRF3-230ENST00000601809 SPHKAPQ2M3C7 1700 aa26.45■■□□□ 1.82
IRF3-230ENST00000601809 IQSEC2Q5JU85 1478 aa26.44■■□□□ 1.82
IRF3-230ENST00000601809 ZFYVE9O95405 1425 aa26.41■■□□□ 1.82
IRF3-230ENST00000601809 STRCP1A6NGW2 1772 aa26.4■■□□□ 1.82
IRF3-230ENST00000601809 TXNDC2Q86VQ3 553 aa26.39■■□□□ 1.82
IRF3-230ENST00000601809 TRPM2O94759 1503 aa26.36■■□□□ 1.81
IRF3-230ENST00000601809 STAG3Q9UJ98 1225 aa26.36■■□□□ 1.81
IRF3-230ENST00000601809 CPS1P31327 1500 aa26.35■■□□□ 1.81
IRF3-230ENST00000601809 CLTCL1P53675 1640 aa26.33■■□□□ 1.81
IRF3-230ENST00000601809 EID1Q9Y6B2 187 aa26.33■■□□□ 1.81
IRF3-230ENST00000601809 RIMS2Q9UQ26 1411 aa26.31■■□□□ 1.8
IRF3-230ENST00000601809 TRIM52Q96A61 297 aa26.28■■□□□ 1.8
IRF3-230ENST00000601809 SETD5Q9C0A6 1442 aa26.28■■□□□ 1.8
IRF3-230ENST00000601809 PLEKHG1Q9ULL1 1385 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms