RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 CCDC141Q6ZP82 1450 aa22.59■■□□□ 1.21
NEAT1-203ENST00000601801 LRRC9Q6ZRR7 1453 aa22.59■■□□□ 1.21
NEAT1-203ENST00000601801 DNMT1P26358 1616 aaKnown RBP22.57■■□□□ 1.2
NEAT1-203ENST00000601801 PPP6R1Q9UPN7 881 aa22.57■■□□□ 1.2
NEAT1-203ENST00000601801 A2ML1A8K2U0 1454 aa22.56■■□□□ 1.2
NEAT1-203ENST00000601801 POLR1AO95602 1720 aaPredicted RBP22.55■■□□□ 1.2
NEAT1-203ENST00000601801 DHX29Q7Z478 1369 aaKnown RBP22.54■■□□□ 1.2
NEAT1-203ENST00000601801 MAP3K1Q13233 1512 aa22.54■■□□□ 1.2
NEAT1-203ENST00000601801 ARHGEF5Q12774 1597 aa22.52■■□□□ 1.2
NEAT1-203ENST00000601801 TSPY4P0CV99 314 aa22.51■■□□□ 1.19
NEAT1-203ENST00000601801 TSPY10P0CW01 314 aa22.51■■□□□ 1.19
NEAT1-203ENST00000601801 KANK4Q5T7N3 995 aaPredicted RBP22.5■■□□□ 1.19
NEAT1-203ENST00000601801 MED1Q15648 1581 aaPredicted RBP22.5■■□□□ 1.19
NEAT1-203ENST00000601801 NEURL4Q96JN8 1562 aa22.5■■□□□ 1.19
NEAT1-203ENST00000601801 CPS1P31327 1500 aa22.49■■□□□ 1.19
NEAT1-203ENST00000601801 KIF3BO15066 747 aa22.49■■□□□ 1.19
NEAT1-203ENST00000601801 HSPA1LP34931 641 aa22.46■■□□□ 1.19
NEAT1-203ENST00000601801 SHANK2Q9UPX8 1470 aa22.45■■□□□ 1.18
NEAT1-203ENST00000601801 APLP2Q06481 763 aa22.44■■□□□ 1.18
NEAT1-203ENST00000601801 MYOM3Q5VTT5 1437 aa22.44■■□□□ 1.18
NEAT1-203ENST00000601801 MIA2Q96PC5 1412 aa22.44■■□□□ 1.18
NEAT1-203ENST00000601801 SCAF1Q9H7N4 1312 aaKnown RBP22.43■■□□□ 1.18
NEAT1-203ENST00000601801 TOM1O60784 492 aa22.43■■□□□ 1.18
NEAT1-203ENST00000601801 FAM135AQ9P2D6 1515 aa22.42■■□□□ 1.18
NEAT1-203ENST00000601801 TNRQ92752 1358 aa22.42■■□□□ 1.18
NEAT1-203ENST00000601801 PIP4K2BP78356 416 aa22.42■■□□□ 1.18
NEAT1-203ENST00000601801 KDM5DQ9BY66 1539 aa22.41■■□□□ 1.18
NEAT1-203ENST00000601801 PZPP20742 1482 aa22.41■■□□□ 1.18
NEAT1-203ENST00000601801 MAST1Q9Y2H9 1570 aa22.41■■□□□ 1.18
NEAT1-203ENST00000601801 WASHC2CQ9Y4E1 1318 aa22.4■■□□□ 1.18
NEAT1-203ENST00000601801 FBXO31Q5XUX0 539 aaPredicted RBP22.4■■□□□ 1.18
NEAT1-203ENST00000601801 VWDEQ8N2E2 1590 aa22.4■■□□□ 1.18
NEAT1-203ENST00000601801 DEPDC5O75140 1603 aa22.37■■□□□ 1.17
NEAT1-203ENST00000601801 ALKQ9UM73 1620 aa22.37■■□□□ 1.17
NEAT1-203ENST00000601801 MED14O60244 1454 aa22.35■■□□□ 1.17
NEAT1-203ENST00000601801 ANKLE2Q86XL3 938 aa22.35■■□□□ 1.17
NEAT1-203ENST00000601801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.35■■□□□ 1.177e-31■□□□□ 11.2
NEAT1-203ENST00000601801 NLRP1Q9C000 1473 aa22.34■■□□□ 1.17
NEAT1-203ENST00000601801 UGGT1Q9NYU2 1555 aa22.33■■□□□ 1.17
NEAT1-203ENST00000601801 THEMISQ8N1K5 641 aaPredicted RBP22.33■■□□□ 1.17
NEAT1-203ENST00000601801 RNF17Q9BXT8 1623 aaKnown RBP22.32■■□□□ 1.16
NEAT1-203ENST00000601801 EIF2AK4Q9P2K8 1649 aaKnown RBP22.32■■□□□ 1.16
NEAT1-203ENST00000601801 NPHP4O75161 1426 aaPredicted RBP22.31■■□□□ 1.16
NEAT1-203ENST00000601801 IQGAP1P46940 1657 aa22.31■■□□□ 1.16
NEAT1-203ENST00000601801 STRCP1A6NGW2 1772 aa22.3■■□□□ 1.16
NEAT1-203ENST00000601801 PTPN23Q9H3S7 1636 aa22.3■■□□□ 1.16
NEAT1-203ENST00000601801 DUOX2Q9NRD8 1548 aa22.28■■□□□ 1.16
NEAT1-203ENST00000601801 ZC3H13Q5T200 1668 aaKnown RBP22.28■■□□□ 1.16
NEAT1-203ENST00000601801 CROCC2H7BZ55 1655 aa22.26■■□□□ 1.15
NEAT1-203ENST00000601801 ABCC3O15438 1527 aa22.26■■□□□ 1.15
NEAT1-203ENST00000601801 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
NEAT1-203ENST00000601801 SYNMO15061 1565 aa22.25■■□□□ 1.15
NEAT1-203ENST00000601801 ABCC5O15440 1437 aa22.25■■□□□ 1.15
NEAT1-203ENST00000601801 FGD6Q6ZV73 1430 aa22.24■■□□□ 1.15
NEAT1-203ENST00000601801 LRRC7Q96NW7 1537 aa22.24■■□□□ 1.15
NEAT1-203ENST00000601801 KIF15Q9NS87 1388 aa22.24■■□□□ 1.15
NEAT1-203ENST00000601801 MROH1Q8NDA8 1641 aa22.22■■□□□ 1.15
NEAT1-203ENST00000601801 RRP7BPQ9NSQ0 103 aa22.22■■□□□ 1.15
NEAT1-203ENST00000601801 DAPK1P53355 1430 aa22.22■■□□□ 1.15
NEAT1-203ENST00000601801 ERBINQ96RT1 1412 aa22.2■■□□□ 1.14
NEAT1-203ENST00000601801 CEP152O94986 1710 aa22.2■■□□□ 1.14
NEAT1-203ENST00000601801 UBR1Q8IWV7 1749 aa22.17■■□□□ 1.14
NEAT1-203ENST00000601801 ERVK-7P63135 1459 aa22.16■■□□□ 1.14
NEAT1-203ENST00000601801 PRDM15P57071 1507 aaPredicted RBP22.16■■□□□ 1.14
NEAT1-203ENST00000601801 CFAP65Q6ZU64 1925 aaKnown RBP22.16■■□□□ 1.14
NEAT1-203ENST00000601801 ANKRD30AQ9BXX3 1397 aa22.15■■□□□ 1.14
NEAT1-203ENST00000601801 CHIC2Q9UKJ5 165 aa22.14■■□□□ 1.13
NEAT1-203ENST00000601801 XIRP1Q702N8 1843 aaKnown RBP22.14■■□□□ 1.13
NEAT1-203ENST00000601801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.13■■□□□ 1.13
NEAT1-203ENST00000601801 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
NEAT1-203ENST00000601801 KANK1Q14678 1352 aa22.12■■□□□ 1.13
NEAT1-203ENST00000601801 ARHGAP31Q2M1Z3 1444 aa22.11■■□□□ 1.13
NEAT1-203ENST00000601801 SCAF11Q99590 1463 aaKnown RBP22.09■■□□□ 1.13
NEAT1-203ENST00000601801 FAM50AQ14320 339 aaKnown RBP22.09■■□□□ 1.13
NEAT1-203ENST00000601801 ARHGAP23Q9P227 1491 aa22.09■■□□□ 1.13
NEAT1-203ENST00000601801 SLIT1O75093 1534 aa22.08■■□□□ 1.13
NEAT1-203ENST00000601801 RGS17Q9UGC6 210 aaPredicted RBP22.08■■□□□ 1.13
NEAT1-203ENST00000601801 ADGRL2O95490 1459 aa22.05■■□□□ 1.12
NEAT1-203ENST00000601801 LTKP29376 864 aa22.04■■□□□ 1.12
NEAT1-203ENST00000601801 LMTK2Q8IWU2 1503 aa22.02■■□□□ 1.12
NEAT1-203ENST00000601801 TXNDC2Q86VQ3 553 aa22.01■■□□□ 1.11
NEAT1-203ENST00000601801 PIK3C2BO00750 1634 aa21.99■■□□□ 1.11
NEAT1-203ENST00000601801 FAM135BQ49AJ0 1406 aa21.99■■□□□ 1.11
NEAT1-203ENST00000601801 STAG3Q9UJ98 1225 aa21.98■■□□□ 1.11
NEAT1-203ENST00000601801 ANKRD50Q9ULJ7 1429 aa21.97■■□□□ 1.11
NEAT1-203ENST00000601801 KDM5AP29375 1690 aaKnown RBP21.96■■□□□ 1.11
NEAT1-203ENST00000601801 EID1Q9Y6B2 187 aa21.96■■□□□ 1.11
NEAT1-203ENST00000601801 EFCAB6Q5THR3 1501 aa21.96■■□□□ 1.11
NEAT1-203ENST00000601801 ROBO1Q9Y6N7 1651 aa21.94■■□□□ 1.1
NEAT1-203ENST00000601801 TMEM2Q9UHN6 1383 aa21.93■■□□□ 1.1
NEAT1-203ENST00000601801 IDI1Q13907 227 aa21.92■■□□□ 1.1
NEAT1-203ENST00000601801 POTEAQ6S8J7 498 aa21.92■■□□□ 1.1
NEAT1-203ENST00000601801 NOS1P29475 1434 aa21.91■■□□□ 1.1
NEAT1-203ENST00000601801 TMEM94Q12767 1356 aa21.91■■□□□ 1.1
NEAT1-203ENST00000601801 RPRD2Q5VT52 1461 aaKnown RBP21.9■■□□□ 1.1
NEAT1-203ENST00000601801 TET3O43151 1660 aa21.89■■□□□ 1.1
NEAT1-203ENST00000601801 SLC52A1Q9NWF4 448 aa21.88■■□□□ 1.09
NEAT1-203ENST00000601801 ROCK1Q13464 1354 aa21.87■■□□□ 1.09
NEAT1-203ENST00000601801 KCNA6P17658 529 aa21.87■■□□□ 1.09
NEAT1-203ENST00000601801 NWD1Q149M9 1564 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms