RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 MLH3Q9UHC1 1453 aa19.9■□□□□ 0.78
IRF3-229ENST00000601373 KDM5CP41229 1560 aa19.9■□□□□ 0.78
IRF3-229ENST00000601373 LMTK3Q96Q04 1460 aa19.89■□□□□ 0.77
IRF3-229ENST00000601373 SIN3AQ96ST3 1273 aa19.88■□□□□ 0.77
IRF3-229ENST00000601373 FRMPD1Q5SYB0 1578 aa19.87■□□□□ 0.77
IRF3-229ENST00000601373 DHX29Q7Z478 1369 aaKnown RBP19.86■□□□□ 0.77
IRF3-229ENST00000601373 NEUROD1Q13562 356 aa19.86■□□□□ 0.77
IRF3-229ENST00000601373 MADDQ8WXG6 1647 aa19.86■□□□□ 0.77
IRF3-229ENST00000601373 UNC13BO14795 1591 aa19.86■□□□□ 0.77
IRF3-229ENST00000601373 KIDINS220Q9ULH0 1771 aa19.85■□□□□ 0.77
IRF3-229ENST00000601373 ARHGEF40Q8TER5 1519 aa19.84■□□□□ 0.77
IRF3-229ENST00000601373 ANKRD30BQ9BXX2 1392 aa19.83■□□□□ 0.76
IRF3-229ENST00000601373 PKD2Q13563 968 aa19.82■□□□□ 0.76
IRF3-229ENST00000601373 RICTORQ6R327 1708 aa19.81■□□□□ 0.76
IRF3-229ENST00000601373 EIF2AK4Q9P2K8 1649 aaKnown RBP19.8■□□□□ 0.76
IRF3-229ENST00000601373 MAGI2Q86UL8 1455 aa19.8■□□□□ 0.76
IRF3-229ENST00000601373 FAM135AQ9P2D6 1515 aa19.8■□□□□ 0.76
IRF3-229ENST00000601373 A2MP01023 1474 aa19.79■□□□□ 0.76
IRF3-229ENST00000601373 TONSLQ96HA7 1378 aa19.79■□□□□ 0.76
IRF3-229ENST00000601373 IQGAP3Q86VI3 1631 aa19.78■□□□□ 0.76
IRF3-229ENST00000601373 FOXD1Q16676 465 aa19.78■□□□□ 0.76
IRF3-229ENST00000601373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.78■□□□□ 0.765e-6■■■□□ 18.6
IRF3-229ENST00000601373 RIMS1Q86UR5 1692 aaKnown RBP19.77■□□□□ 0.76
IRF3-229ENST00000601373 ZMYM4Q5VZL5 1548 aa19.76■□□□□ 0.75
IRF3-229ENST00000601373 KANK1Q14678 1352 aa19.76■□□□□ 0.75
IRF3-229ENST00000601373 KIF3BO15066 747 aa19.76■□□□□ 0.75
IRF3-229ENST00000601373 DEPDC5O75140 1603 aa19.74■□□□□ 0.75
IRF3-229ENST00000601373 PPP1R15AO75807 674 aaPredicted RBP19.73■□□□□ 0.75
IRF3-229ENST00000601373 CERKQ8TCT0 537 aa19.73■□□□□ 0.75
IRF3-229ENST00000601373 RPRD2Q5VT52 1461 aaKnown RBP19.73■□□□□ 0.75
IRF3-229ENST00000601373 ABCA6Q8N139 1617 aa19.72■□□□□ 0.75
IRF3-229ENST00000601373 HSPA2P54652 639 aa19.71■□□□□ 0.75
IRF3-229ENST00000601373 DIP2CQ9Y2E4 1556 aa19.7■□□□□ 0.74
IRF3-229ENST00000601373 PRDM15P57071 1507 aaPredicted RBP19.68■□□□□ 0.74
IRF3-229ENST00000601373 VWDEQ8N2E2 1590 aa19.68■□□□□ 0.74
IRF3-229ENST00000601373 RNF17Q9BXT8 1623 aaKnown RBP19.67■□□□□ 0.74
IRF3-229ENST00000601373 YEATS2Q9ULM3 1422 aa19.67■□□□□ 0.74
IRF3-229ENST00000601373 DMRT2Q9Y5R5 561 aa19.66■□□□□ 0.74
IRF3-229ENST00000601373 ATP10AO60312 1499 aa19.66■□□□□ 0.74
IRF3-229ENST00000601373 MROH1Q8NDA8 1641 aa19.64■□□□□ 0.73
IRF3-229ENST00000601373 TET3O43151 1660 aa19.64■□□□□ 0.73
IRF3-229ENST00000601373 LMTK2Q8IWU2 1503 aa19.63■□□□□ 0.73
IRF3-229ENST00000601373 ZNF316A6NFI3 1004 aaPredicted RBP19.63■□□□□ 0.73
IRF3-229ENST00000601373 PLPPR3Q6T4P5 718 aa19.63■□□□□ 0.73
IRF3-229ENST00000601373 REREQ9P2R6 1566 aa19.62■□□□□ 0.73
IRF3-229ENST00000601373 MLECQ14165 292 aa19.62■□□□□ 0.73
IRF3-229ENST00000601373 L3MBTL2Q969R5 705 aa19.62■□□□□ 0.73
IRF3-229ENST00000601373 FER1L4A9Z1Z3 1794 aa19.61■□□□□ 0.73
IRF3-229ENST00000601373 CCDC144AA2RUR9 1427 aa19.6■□□□□ 0.73
IRF3-229ENST00000601373 GGT6Q6P531 493 aa19.6■□□□□ 0.73
IRF3-229ENST00000601373 AGLP35573 1532 aa19.58■□□□□ 0.73
IRF3-229ENST00000601373 PLA2R1Q13018 1463 aa19.58■□□□□ 0.72
IRF3-229ENST00000601373 E9PCH4 1651 aa19.58■□□□□ 0.72
IRF3-229ENST00000601373 SIGLEC1Q9BZZ2 1709 aa19.57■□□□□ 0.72
IRF3-229ENST00000601373 PPP6R1Q9UPN7 881 aa19.57■□□□□ 0.72
IRF3-229ENST00000601373 PTPRTO14522 1441 aa19.57■□□□□ 0.72
IRF3-229ENST00000601373 WASHC2CQ9Y4E1 1318 aa19.56■□□□□ 0.72
IRF3-229ENST00000601373 PREX1Q8TCU6 1659 aa19.56■□□□□ 0.72
IRF3-229ENST00000601373 EFCAB6Q5THR3 1501 aa19.54■□□□□ 0.72
IRF3-229ENST00000601373 UHRF1BP1Q6BDS2 1440 aa19.52■□□□□ 0.72
IRF3-229ENST00000601373 ABCC3O15438 1527 aa19.52■□□□□ 0.72
IRF3-229ENST00000601373 TRPM2O94759 1503 aa19.52■□□□□ 0.72
IRF3-229ENST00000601373 SETD1BQ9UPS6 1966 aaKnown RBP19.52■□□□□ 0.71
IRF3-229ENST00000601373 CEP152O94986 1710 aa19.51■□□□□ 0.71
IRF3-229ENST00000601373 SPHKAPQ2M3C7 1700 aa19.51■□□□□ 0.71
IRF3-229ENST00000601373 ZC3H13Q5T200 1668 aaKnown RBP19.51■□□□□ 0.71
IRF3-229ENST00000601373 DISP3Q9P2K9 1392 aa19.49■□□□□ 0.71
IRF3-229ENST00000601373 ARHGAP31Q2M1Z3 1444 aa19.49■□□□□ 0.71
IRF3-229ENST00000601373 SOCS7O14512 581 aa19.48■□□□□ 0.71
IRF3-229ENST00000601373 CEBPAP49715 358 aaPredicted RBP19.48■□□□□ 0.71
IRF3-229ENST00000601373 NPATQ14207 1427 aa19.46■□□□□ 0.71
IRF3-229ENST00000601373 STAC3Q96MF2 364 aa19.46■□□□□ 0.71
IRF3-229ENST00000601373 CAMSAP1Q5T5Y3 1602 aa19.45■□□□□ 0.7
IRF3-229ENST00000601373 STRCQ7RTU9 1775 aa19.44■□□□□ 0.7
IRF3-229ENST00000601373 CNTLNQ9NXG0 1405 aa19.44■□□□□ 0.7
IRF3-229ENST00000601373 NBPF8Q3BBV2 869 aa19.44■□□□□ 0.7
IRF3-229ENST00000601373 DCAF11Q8TEB1 546 aa19.44■□□□□ 0.7
IRF3-229ENST00000601373 ESF1Q9H501 851 aaKnown RBP19.44■□□□□ 0.7
IRF3-229ENST00000601373 NEURL4Q96JN8 1562 aa19.44■□□□□ 0.7
IRF3-229ENST00000601373 SPATA31E1Q6ZUB1 1445 aa19.42■□□□□ 0.7
IRF3-229ENST00000601373 IQSEC2Q5JU85 1478 aa19.41■□□□□ 0.7
IRF3-229ENST00000601373 CLTCL1P53675 1640 aa19.41■□□□□ 0.7
IRF3-229ENST00000601373 RGL3Q3MIN7 710 aa19.41■□□□□ 0.7
IRF3-229ENST00000601373 NOS1P29475 1434 aa19.41■□□□□ 0.7
IRF3-229ENST00000601373 ILDR2Q71H61 639 aa19.4■□□□□ 0.7
IRF3-229ENST00000601373 KDM2AQ9Y2K7 1162 aa19.39■□□□□ 0.69
IRF3-229ENST00000601373 EIF4G2P78344 907 aaKnown RBP eCLIP19.37■□□□□ 0.69
IRF3-229ENST00000601373 KIF1BO60333 1816 aa19.37■□□□□ 0.69
IRF3-229ENST00000601373 ZNF326Q5BKZ1 582 aaKnown RBP19.36■□□□□ 0.69
IRF3-229ENST00000601373 DIEXFQ68CQ4 756 aaKnown RBP19.36■□□□□ 0.69
IRF3-229ENST00000601373 SLC52A1Q9NWF4 448 aa19.36■□□□□ 0.69
IRF3-229ENST00000601373 CFAP65Q6ZU64 1925 aaKnown RBP19.35■□□□□ 0.69
IRF3-229ENST00000601373 RALGAPBQ86X10 1494 aa19.35■□□□□ 0.69
IRF3-229ENST00000601373 PRAG1Q86YV5 1406 aa19.34■□□□□ 0.69
IRF3-229ENST00000601373 C3P01024 1663 aa19.33■□□□□ 0.69
IRF3-229ENST00000601373 CLTCQ00610 1675 aaKnown RBP19.32■□□□□ 0.68
IRF3-229ENST00000601373 LTBP4Q8N2S1 1624 aa19.32■□□□□ 0.68
IRF3-229ENST00000601373 SPATA31D1Q6ZQQ2 1576 aa19.32■□□□□ 0.68
IRF3-229ENST00000601373 UGGT1Q9NYU2 1555 aa19.32■□□□□ 0.68
IRF3-229ENST00000601373 RPGRIP1LQ68CZ1 1315 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms