RNA–Protein interactions for RNA: ENST00000601213.5

GTPBP3-224, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-224ENST00000601213 KIF3BO15066 747 aa27.39■■□□□ 1.98
GTPBP3-224ENST00000601213 ABCC5O15440 1437 aa27.39■■□□□ 1.97
GTPBP3-224ENST00000601213 ZNF142P52746 1687 aaPredicted RBP27.39■■□□□ 1.97
GTPBP3-224ENST00000601213 PTPRKQ15262 1439 aa27.38■■□□□ 1.97
GTPBP3-224ENST00000601213 DAPK1P53355 1430 aa27.36■■□□□ 1.97
GTPBP3-224ENST00000601213 MROH1Q8NDA8 1641 aa27.36■■□□□ 1.97
GTPBP3-224ENST00000601213 PPP6R1Q9UPN7 881 aa27.34■■□□□ 1.97
GTPBP3-224ENST00000601213 DUOX2Q9NRD8 1548 aa27.33■■□□□ 1.97
GTPBP3-224ENST00000601213 ZC3H13Q5T200 1668 aaKnown RBP27.33■■□□□ 1.97
GTPBP3-224ENST00000601213 CEP152O94986 1710 aa27.32■■□□□ 1.96
GTPBP3-224ENST00000601213 CEP170BQ9Y4F5 1589 aaPredicted RBP27.31■■□□□ 1.96
GTPBP3-224ENST00000601213 PZPP20742 1482 aa27.28■■□□□ 1.96
GTPBP3-224ENST00000601213 KIF15Q9NS87 1388 aa27.28■■□□□ 1.96
GTPBP3-224ENST00000601213 ABCC3O15438 1527 aa27.27■■□□□ 1.96
GTPBP3-224ENST00000601213 CAMSAP1Q5T5Y3 1602 aa27.27■■□□□ 1.96
GTPBP3-224ENST00000601213 ILDR1Q86SU0 546 aaPredicted RBP27.25■■□□□ 1.95
GTPBP3-224ENST00000601213 NCOA1Q15788 1441 aa27.24■■□□□ 1.95
GTPBP3-224ENST00000601213 DEPDC5O75140 1603 aa27.23■■□□□ 1.95
GTPBP3-224ENST00000601213 PRDM15P57071 1507 aaPredicted RBP27.23■■□□□ 1.95
GTPBP3-224ENST00000601213 ERBINQ96RT1 1412 aa27.23■■□□□ 1.95
GTPBP3-224ENST00000601213 WASHC2CQ9Y4E1 1318 aa27.22■■□□□ 1.95
GTPBP3-224ENST00000601213 A2ML1A8K2U0 1454 aa27.19■■□□□ 1.94
GTPBP3-224ENST00000601213 ADGRL2O95490 1459 aa27.19■■□□□ 1.94
GTPBP3-224ENST00000601213 FBXO31Q5XUX0 539 aaPredicted RBP27.18■■□□□ 1.94
GTPBP3-224ENST00000601213 RRP7BPQ9NSQ0 103 aa27.18■■□□□ 1.94
GTPBP3-224ENST00000601213 CFAP65Q6ZU64 1925 aaKnown RBP27.18■■□□□ 1.94
GTPBP3-224ENST00000601213 TNRQ92752 1358 aa27.17■■□□□ 1.94
GTPBP3-224ENST00000601213 CHIC2Q9UKJ5 165 aa27.16■■□□□ 1.94
GTPBP3-224ENST00000601213 SPATA31D1Q6ZQQ2 1576 aa27.15■■□□□ 1.94
GTPBP3-224ENST00000601213 PLA2R1Q13018 1463 aa27.15■■□□□ 1.94
GTPBP3-224ENST00000601213 ANKRD30AQ9BXX3 1397 aa27.15■■□□□ 1.94
GTPBP3-224ENST00000601213 FAM50AQ14320 339 aaKnown RBP27.15■■□□□ 1.94
GTPBP3-224ENST00000601213 PTPRTO14522 1441 aa27.15■■□□□ 1.94
GTPBP3-224ENST00000601213 POLR1AO95602 1720 aaPredicted RBP27.12■■□□□ 1.93
GTPBP3-224ENST00000601213 ERVK-7P63135 1459 aa27.11■■□□□ 1.93
GTPBP3-224ENST00000601213 DMRT2Q9Y5R5 561 aa27.1■■□□□ 1.93
GTPBP3-224ENST00000601213 PPARGC1BQ86YN6 1023 aaKnown RBP27.09■■□□□ 1.93
GTPBP3-224ENST00000601213 VWDEQ8N2E2 1590 aa27.09■■□□□ 1.93
GTPBP3-224ENST00000601213 NLRP1Q9C000 1473 aa27.07■■□□□ 1.92
GTPBP3-224ENST00000601213 NCKAP5LQ9HCH0 1330 aa27.05■■□□□ 1.92
GTPBP3-224ENST00000601213 NEURL4Q96JN8 1562 aa27.04■■□□□ 1.92
GTPBP3-224ENST00000601213 FBXO41Q8TF61 875 aa27.03■■□□□ 1.92
GTPBP3-224ENST00000601213 UGGT1Q9NYU2 1555 aa27.03■■□□□ 1.92
GTPBP3-224ENST00000601213 LTBP4Q8N2S1 1624 aa27.02■■□□□ 1.92
GTPBP3-224ENST00000601213 LMTK2Q8IWU2 1503 aa27.02■■□□□ 1.92
GTPBP3-224ENST00000601213 ARHGAP31Q2M1Z3 1444 aa27.02■■□□□ 1.92
GTPBP3-224ENST00000601213 UBR1Q8IWV7 1749 aa27■■□□□ 1.91
GTPBP3-224ENST00000601213 CERKQ8TCT0 537 aa27■■□□□ 1.91
GTPBP3-224ENST00000601213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27■■□□□ 1.912e-6■■□□□ 14.2
GTPBP3-224ENST00000601213 ANKRD50Q9ULJ7 1429 aa26.99■■□□□ 1.91
GTPBP3-224ENST00000601213 EFCAB6Q5THR3 1501 aa26.99■■□□□ 1.91
GTPBP3-224ENST00000601213 UNC13BO14795 1591 aa26.98■■□□□ 1.91
GTPBP3-224ENST00000601213 KANK1Q14678 1352 aa26.97■■□□□ 1.91
GTPBP3-224ENST00000601213 PKD2Q13563 968 aa26.97■■□□□ 1.91
GTPBP3-224ENST00000601213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.95■■□□□ 1.9
GTPBP3-224ENST00000601213 PIK3C2BO00750 1634 aa26.94■■□□□ 1.9
GTPBP3-224ENST00000601213 ROCK1Q13464 1354 aa26.93■■□□□ 1.9
GTPBP3-224ENST00000601213 SYNMO15061 1565 aa26.92■■□□□ 1.9
GTPBP3-224ENST00000601213 TET3O43151 1660 aa26.92■■□□□ 1.9
GTPBP3-224ENST00000601213 GCC2Q8IWJ2 1684 aa26.91■■□□□ 1.9
GTPBP3-224ENST00000601213 RRBP1Q9P2E9 1410 aaKnown RBP26.9■■□□□ 1.9
GTPBP3-224ENST00000601213 IQGAP1P46940 1657 aa26.88■■□□□ 1.89
GTPBP3-224ENST00000601213 ZNF335Q9H4Z2 1342 aaPredicted RBP26.88■■□□□ 1.89
GTPBP3-224ENST00000601213 ITGAEP38570 1179 aa26.87■■□□□ 1.89
GTPBP3-224ENST00000601213 THEMISQ8N1K5 641 aaPredicted RBP26.87■■□□□ 1.89
GTPBP3-224ENST00000601213 IQGAP3Q86VI3 1631 aa26.86■■□□□ 1.89
GTPBP3-224ENST00000601213 MED14O60244 1454 aa26.85■■□□□ 1.89
GTPBP3-224ENST00000601213 KDM5AP29375 1690 aaKnown RBP26.85■■□□□ 1.89
GTPBP3-224ENST00000601213 NOS1P29475 1434 aa26.84■■□□□ 1.89
GTPBP3-224ENST00000601213 E9PCH4 1651 aa26.82■■□□□ 1.88
GTPBP3-224ENST00000601213 NPHP4O75161 1426 aaPredicted RBP26.82■■□□□ 1.88
GTPBP3-224ENST00000601213 IQSEC2Q5JU85 1478 aa26.81■■□□□ 1.88
GTPBP3-224ENST00000601213 ARHGAP23Q9P227 1491 aa26.81■■□□□ 1.88
GTPBP3-224ENST00000601213 SLIT1O75093 1534 aa26.81■■□□□ 1.88
GTPBP3-224ENST00000601213 ANKLE2Q86XL3 938 aa26.81■■□□□ 1.88
GTPBP3-224ENST00000601213 RPRD2Q5VT52 1461 aaKnown RBP26.81■■□□□ 1.88
GTPBP3-224ENST00000601213 MYO5BQ9ULV0 1848 aa26.8■■□□□ 1.88
GTPBP3-224ENST00000601213 ADGRB3O60242 1522 aa26.78■■□□□ 1.88
GTPBP3-224ENST00000601213 SCAF11Q99590 1463 aaKnown RBP26.77■■□□□ 1.88
GTPBP3-224ENST00000601213 STRCP1A6NGW2 1772 aa26.76■■□□□ 1.87
GTPBP3-224ENST00000601213 IDI1Q13907 227 aa26.72■■□□□ 1.87
GTPBP3-224ENST00000601213 CPS1P31327 1500 aa26.71■■□□□ 1.87
GTPBP3-224ENST00000601213 LTKP29376 864 aa26.69■■□□□ 1.86
GTPBP3-224ENST00000601213 TMEM2Q9UHN6 1383 aa26.69■■□□□ 1.86
GTPBP3-224ENST00000601213 NUP155O75694 1391 aa26.68■■□□□ 1.86
GTPBP3-224ENST00000601213 NAIPQ13075 1403 aa26.67■■□□□ 1.86
GTPBP3-224ENST00000601213 TMEM131LA2VDJ0 1609 aa26.67■■□□□ 1.86
GTPBP3-224ENST00000601213 SPHKAPQ2M3C7 1700 aa26.65■■□□□ 1.86
GTPBP3-224ENST00000601213 STAG3Q9UJ98 1225 aa26.65■■□□□ 1.86
GTPBP3-224ENST00000601213 TXNDC2Q86VQ3 553 aa26.64■■□□□ 1.86
GTPBP3-224ENST00000601213 SLC52A1Q9NWF4 448 aa26.63■■□□□ 1.85
GTPBP3-224ENST00000601213 HFM1A2PYH4 1435 aa26.59■■□□□ 1.85
GTPBP3-224ENST00000601213 EID1Q9Y6B2 187 aa26.59■■□□□ 1.85
GTPBP3-224ENST00000601213 ZFYVE9O95405 1425 aa26.57■■□□□ 1.84
GTPBP3-224ENST00000601213 XIRP1Q702N8 1843 aaKnown RBP26.57■■□□□ 1.84
GTPBP3-224ENST00000601213 LRRC7Q96NW7 1537 aa26.55■■□□□ 1.84
GTPBP3-224ENST00000601213 UBAP1LF5GYI3 381 aa26.53■■□□□ 1.84
GTPBP3-224ENST00000601213 ALKQ9UM73 1620 aa26.53■■□□□ 1.84
GTPBP3-224ENST00000601213 RIMS2Q9UQ26 1411 aa26.52■■□□□ 1.84
GTPBP3-224ENST00000601213 CLTCL1P53675 1640 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms