RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 PPP6R1Q9UPN7 881 aa13.31□□□□□ -0.28
CCDC9-206ENST00000601154 A2ML1A8K2U0 1454 aa13.3□□□□□ -0.28
CCDC9-206ENST00000601154 TNRQ92752 1358 aa13.3□□□□□ -0.28
CCDC9-206ENST00000601154 KDM5DQ9BY66 1539 aa13.29□□□□□ -0.28
CCDC9-206ENST00000601154 WASHC2CQ9Y4E1 1318 aa13.28□□□□□ -0.28
CCDC9-206ENST00000601154 DNMT1P26358 1616 aaKnown RBP13.28□□□□□ -0.28
CCDC9-206ENST00000601154 PZPP20742 1482 aa13.27□□□□□ -0.29
CCDC9-206ENST00000601154 SCAF1Q9H7N4 1312 aaKnown RBP13.25□□□□□ -0.29
CCDC9-206ENST00000601154 TSPY4P0CV99 314 aa13.25□□□□□ -0.29
CCDC9-206ENST00000601154 TSPY10P0CW01 314 aa13.25□□□□□ -0.29
CCDC9-206ENST00000601154 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCDC9-206ENST00000601154 SOCS7O14512 581 aa13.24□□□□□ -0.29
CCDC9-206ENST00000601154 RSPH4AQ5TD94 716 aa13.24□□□□□ -0.29
CCDC9-206ENST00000601154 NEURL4Q96JN8 1562 aa13.24□□□□□ -0.29
CCDC9-206ENST00000601154 VPS8Q8N3P4 1428 aa13.23□□□□□ -0.29
CCDC9-206ENST00000601154 LOC105371045A0A1W2PR82 267 aa13.23□□□□□ -0.29
CCDC9-206ENST00000601154 ARHGEF5Q12774 1597 aa13.23□□□□□ -0.29
CCDC9-206ENST00000601154 LRRC9Q6ZRR7 1453 aa13.23□□□□□ -0.29
CCDC9-206ENST00000601154 PIP4K2BP78356 416 aa13.22□□□□□ -0.29
CCDC9-206ENST00000601154 FAM135AQ9P2D6 1515 aa13.22□□□□□ -0.29
CCDC9-206ENST00000601154 MIA2Q96PC5 1412 aa13.22□□□□□ -0.29
CCDC9-206ENST00000601154 KANK4Q5T7N3 995 aaPredicted RBP13.21□□□□□ -0.29
CCDC9-206ENST00000601154 ANKLE2Q86XL3 938 aa13.21□□□□□ -0.29
CCDC9-206ENST00000601154 UGGT1Q9NYU2 1555 aa13.2□□□□□ -0.3
CCDC9-206ENST00000601154 POLR1AO95602 1720 aaPredicted RBP13.2□□□□□ -0.3
CCDC9-206ENST00000601154 THEMISQ8N1K5 641 aaPredicted RBP13.2□□□□□ -0.3
CCDC9-206ENST00000601154 NLRP1Q9C000 1473 aa13.2□□□□□ -0.3
CCDC9-206ENST00000601154 SHANK2Q9UPX8 1470 aa13.2□□□□□ -0.3
CCDC9-206ENST00000601154 ABCC3O15438 1527 aa13.18□□□□□ -0.3
CCDC9-206ENST00000601154 CPS1P31327 1500 aa13.18□□□□□ -0.3
CCDC9-206ENST00000601154 NPHP4O75161 1426 aaPredicted RBP13.18□□□□□ -0.3
CCDC9-206ENST00000601154 HSPA1LP34931 641 aa13.17□□□□□ -0.3
CCDC9-206ENST00000601154 RNF17Q9BXT8 1623 aaKnown RBP13.17□□□□□ -0.3
CCDC9-206ENST00000601154 MAST1Q9Y2H9 1570 aa13.16□□□□□ -0.3
CCDC9-206ENST00000601154 MYOM3Q5VTT5 1437 aa13.16□□□□□ -0.3
CCDC9-206ENST00000601154 TOM1O60784 492 aa13.16□□□□□ -0.3
CCDC9-206ENST00000601154 ERVK-7P63135 1459 aa13.16□□□□□ -0.3
CCDC9-206ENST00000601154 VWDEQ8N2E2 1590 aa13.15□□□□□ -0.3
CCDC9-206ENST00000601154 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.3
CCDC9-206ENST00000601154 ZC3H13Q5T200 1668 aaKnown RBP13.14□□□□□ -0.31
CCDC9-206ENST00000601154 MROH1Q8NDA8 1641 aa13.13□□□□□ -0.31
CCDC9-206ENST00000601154 MED14O60244 1454 aa13.13□□□□□ -0.31
CCDC9-206ENST00000601154 EIF2AK4Q9P2K8 1649 aaKnown RBP13.13□□□□□ -0.31
CCDC9-206ENST00000601154 KIF15Q9NS87 1388 aa13.12□□□□□ -0.31
CCDC9-206ENST00000601154 DEPDC5O75140 1603 aa13.12□□□□□ -0.31
CCDC9-206ENST00000601154 MAP3K1Q13233 1512 aa13.12□□□□□ -0.31
CCDC9-206ENST00000601154 DUOX2Q9NRD8 1548 aa13.12□□□□□ -0.31
CCDC9-206ENST00000601154 IQGAP1P46940 1657 aa13.12□□□□□ -0.31
CCDC9-206ENST00000601154 CEP152O94986 1710 aa13.11□□□□□ -0.31
CCDC9-206ENST00000601154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.11□□□□□ -0.31
CCDC9-206ENST00000601154 RRP7BPQ9NSQ0 103 aa13.11□□□□□ -0.31
CCDC9-206ENST00000601154 MED1Q15648 1581 aaPredicted RBP13.1□□□□□ -0.31
CCDC9-206ENST00000601154 ABCC5O15440 1437 aa13.09□□□□□ -0.31
CCDC9-206ENST00000601154 LRRC7Q96NW7 1537 aa13.08□□□□□ -0.31
CCDC9-206ENST00000601154 APLP2Q06481 763 aa13.08□□□□□ -0.32
CCDC9-206ENST00000601154 ALKQ9UM73 1620 aa13.08□□□□□ -0.32
CCDC9-206ENST00000601154 SCAF11Q99590 1463 aaKnown RBP13.08□□□□□ -0.32
CCDC9-206ENST00000601154 PRDM15P57071 1507 aaPredicted RBP13.08□□□□□ -0.32
CCDC9-206ENST00000601154 ERBINQ96RT1 1412 aa13.07□□□□□ -0.32
CCDC9-206ENST00000601154 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
CCDC9-206ENST00000601154 DAPK1P53355 1430 aa13.06□□□□□ -0.32
CCDC9-206ENST00000601154 UBR1Q8IWV7 1749 aa13.06□□□□□ -0.32
CCDC9-206ENST00000601154 LTKP29376 864 aa13.06□□□□□ -0.32
CCDC9-206ENST00000601154 TXNDC2Q86VQ3 553 aa13.06□□□□□ -0.32
CCDC9-206ENST00000601154 CHIC2Q9UKJ5 165 aa13.06□□□□□ -0.32
CCDC9-206ENST00000601154 STRCP1A6NGW2 1772 aa13.06□□□□□ -0.32
CCDC9-206ENST00000601154 CROCC2H7BZ55 1655 aa13.05□□□□□ -0.32
CCDC9-206ENST00000601154 PHF23Q9BUL5 403 aaPredicted RBP13.05□□□□□ -0.32
CCDC9-206ENST00000601154 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
CCDC9-206ENST00000601154 SYNMO15061 1565 aa13.05□□□□□ -0.32
CCDC9-206ENST00000601154 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
CCDC9-206ENST00000601154 EID1Q9Y6B2 187 aa13.04□□□□□ -0.32
CCDC9-206ENST00000601154 KANK1Q14678 1352 aa13.04□□□□□ -0.32
CCDC9-206ENST00000601154 FGD6Q6ZV73 1430 aa13.04□□□□□ -0.32
CCDC9-206ENST00000601154 ARHGAP23Q9P227 1491 aa13.04□□□□□ -0.32
CCDC9-206ENST00000601154 SLIT1O75093 1534 aa13.03□□□□□ -0.32
CCDC9-206ENST00000601154 CFAP65Q6ZU64 1925 aaKnown RBP13.02□□□□□ -0.32
CCDC9-206ENST00000601154 PIK3C2BO00750 1634 aa13.02□□□□□ -0.33
CCDC9-206ENST00000601154 ANKRD30AQ9BXX3 1397 aa13.01□□□□□ -0.33
CCDC9-206ENST00000601154 TMEM2Q9UHN6 1383 aa13.01□□□□□ -0.33
CCDC9-206ENST00000601154 IDI1Q13907 227 aa12.99□□□□□ -0.33
CCDC9-206ENST00000601154 EFCAB6Q5THR3 1501 aa12.98□□□□□ -0.33
CCDC9-206ENST00000601154 FAM50AQ14320 339 aaKnown RBP12.98□□□□□ -0.33
CCDC9-206ENST00000601154 RBM33Q96EV2 1170 aaKnown RBP12.98□□□□□ -0.33
CCDC9-206ENST00000601154 SLC26A8Q96RN1 970 aa12.98□□□□□ -0.33
CCDC9-206ENST00000601154 LMTK2Q8IWU2 1503 aa12.98□□□□□ -0.33
CCDC9-206ENST00000601154 TMEM94Q12767 1356 aa12.96□□□□□ -0.33
CCDC9-206ENST00000601154 BCANQ96GW7 911 aa12.96□□□□□ -0.33
CCDC9-206ENST00000601154 ADGRB3O60242 1522 aa12.94□□□□□ -0.34
CCDC9-206ENST00000601154 NOS1P29475 1434 aa12.94□□□□□ -0.34
CCDC9-206ENST00000601154 ADGRL2O95490 1459 aa12.93□□□□□ -0.34
CCDC9-206ENST00000601154 KCNA6P17658 529 aa12.93□□□□□ -0.34
CCDC9-206ENST00000601154 PROSER2Q86WR7 435 aaPredicted RBP12.93□□□□□ -0.34
CCDC9-206ENST00000601154 XIRP1Q702N8 1843 aaKnown RBP12.92□□□□□ -0.34
CCDC9-206ENST00000601154 ANKRD50Q9ULJ7 1429 aa12.92□□□□□ -0.34
CCDC9-206ENST00000601154 TET3O43151 1660 aa12.9□□□□□ -0.34
CCDC9-206ENST00000601154 KDM5AP29375 1690 aaKnown RBP12.9□□□□□ -0.34
CCDC9-206ENST00000601154 FAM135BQ49AJ0 1406 aa12.9□□□□□ -0.34
CCDC9-206ENST00000601154 PPP1R15AO75807 674 aaPredicted RBP12.9□□□□□ -0.34
CCDC9-206ENST00000601154 SLC52A1Q9NWF4 448 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms