RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 RRBP1Q9P2E9 1410 aaKnown RBP17.89■□□□□ 0.45
CHMP2A-207ENST00000600804 MBD5Q9P267 1494 aa17.88■□□□□ 0.45
CHMP2A-207ENST00000600804 ZNF335Q9H4Z2 1342 aaPredicted RBP17.88■□□□□ 0.45
CHMP2A-207ENST00000600804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.88■□□□□ 0.45
CHMP2A-207ENST00000600804 NEURL4Q96JN8 1562 aa17.87■□□□□ 0.45
CHMP2A-207ENST00000600804 ZNF644Q9H582 1327 aaPredicted RBP17.86■□□□□ 0.45
CHMP2A-207ENST00000600804 SOCS7O14512 581 aa17.85■□□□□ 0.45
CHMP2A-207ENST00000600804 PTPN23Q9H3S7 1636 aa17.85■□□□□ 0.45
CHMP2A-207ENST00000600804 CAMSAP2Q08AD1 1489 aa17.83■□□□□ 0.45
CHMP2A-207ENST00000600804 GGT6Q6P531 493 aa17.82■□□□□ 0.44
CHMP2A-207ENST00000600804 A2ML1A8K2U0 1454 aa17.82■□□□□ 0.44
CHMP2A-207ENST00000600804 RSPH4AQ5TD94 716 aa17.81■□□□□ 0.44
CHMP2A-207ENST00000600804 ARHGEF5Q12774 1597 aa17.8■□□□□ 0.44
CHMP2A-207ENST00000600804 RTEL1-TNFRSF6BF6WH68 1400 aa17.78■□□□□ 0.44
CHMP2A-207ENST00000600804 STRCP1A6NGW2 1772 aa17.78■□□□□ 0.44
CHMP2A-207ENST00000600804 PKD2Q13563 968 aa17.77■□□□□ 0.44
CHMP2A-207ENST00000600804 KDM5DQ9BY66 1539 aa17.77■□□□□ 0.43
CHMP2A-207ENST00000600804 ALKQ9UM73 1620 aa17.76■□□□□ 0.43
CHMP2A-207ENST00000600804 DHX29Q7Z478 1369 aaKnown RBP17.76■□□□□ 0.43
CHMP2A-207ENST00000600804 PZPP20742 1482 aa17.75■□□□□ 0.43
CHMP2A-207ENST00000600804 CCDC141Q6ZP82 1450 aa17.75■□□□□ 0.43
CHMP2A-207ENST00000600804 VWDEQ8N2E2 1590 aa17.74■□□□□ 0.43
CHMP2A-207ENST00000600804 UBAP1LF5GYI3 381 aa17.74■□□□□ 0.43
CHMP2A-207ENST00000600804 CFAP65Q6ZU64 1925 aaKnown RBP17.74■□□□□ 0.43
CHMP2A-207ENST00000600804 FAM135AQ9P2D6 1515 aa17.73■□□□□ 0.43
CHMP2A-207ENST00000600804 FBXO31Q5XUX0 539 aaPredicted RBP17.73■□□□□ 0.43
CHMP2A-207ENST00000600804 SHANK2Q9UPX8 1470 aa17.72■□□□□ 0.43
CHMP2A-207ENST00000600804 PPP6R1Q9UPN7 881 aa17.72■□□□□ 0.43
CHMP2A-207ENST00000600804 RNF17Q9BXT8 1623 aaKnown RBP17.72■□□□□ 0.43
CHMP2A-207ENST00000600804 FAM50AQ14320 339 aaKnown RBP17.71■□□□□ 0.43
CHMP2A-207ENST00000600804 CEP152O94986 1710 aa17.71■□□□□ 0.43
CHMP2A-207ENST00000600804 ABCC5O15440 1437 aa17.71■□□□□ 0.43
CHMP2A-207ENST00000600804 DAPK1P53355 1430 aa17.71■□□□□ 0.43
CHMP2A-207ENST00000600804 CROCC2H7BZ55 1655 aa17.71■□□□□ 0.42
CHMP2A-207ENST00000600804 MED1Q15648 1581 aaPredicted RBP17.7■□□□□ 0.42
CHMP2A-207ENST00000600804 MAST1Q9Y2H9 1570 aa17.7■□□□□ 0.42
CHMP2A-207ENST00000600804 TNRQ92752 1358 aa17.7■□□□□ 0.42
CHMP2A-207ENST00000600804 DEPDC5O75140 1603 aa17.7■□□□□ 0.42
CHMP2A-207ENST00000600804 MROH1Q8NDA8 1641 aa17.7■□□□□ 0.42
CHMP2A-207ENST00000600804 CPS1P31327 1500 aa17.69■□□□□ 0.42
CHMP2A-207ENST00000600804 IQGAP1P46940 1657 aa17.69■□□□□ 0.42
CHMP2A-207ENST00000600804 ZC3H13Q5T200 1668 aaKnown RBP17.69■□□□□ 0.42
CHMP2A-207ENST00000600804 KIF3BO15066 747 aa17.67■□□□□ 0.42
CHMP2A-207ENST00000600804 UGGT1Q9NYU2 1555 aa17.66■□□□□ 0.42
CHMP2A-207ENST00000600804 UBR1Q8IWV7 1749 aa17.66■□□□□ 0.42
CHMP2A-207ENST00000600804 XIRP1Q702N8 1843 aaKnown RBP17.65■□□□□ 0.42
CHMP2A-207ENST00000600804 EIF2AK4Q9P2K8 1649 aaKnown RBP17.65■□□□□ 0.42
CHMP2A-207ENST00000600804 MED14O60244 1454 aa17.65■□□□□ 0.42
CHMP2A-207ENST00000600804 TSPY4P0CV99 314 aa17.65■□□□□ 0.42
CHMP2A-207ENST00000600804 TSPY10P0CW01 314 aa17.65■□□□□ 0.42
CHMP2A-207ENST00000600804 TRIM26Q12899 539 aaPredicted RBP17.65■□□□□ 0.42
CHMP2A-207ENST00000600804 ABCC3O15438 1527 aa17.65■□□□□ 0.42
CHMP2A-207ENST00000600804 ADGRL2O95490 1459 aa17.64■□□□□ 0.41
CHMP2A-207ENST00000600804 ROCK1Q13464 1354 aa17.64■□□□□ 0.41
CHMP2A-207ENST00000600804 NLRP1Q9C000 1473 aa17.63■□□□□ 0.41
CHMP2A-207ENST00000600804 HSPA1LP34931 641 aa17.63■□□□□ 0.41
CHMP2A-207ENST00000600804 WASHC2CQ9Y4E1 1318 aa17.6■□□□□ 0.41
CHMP2A-207ENST00000600804 NPHP4O75161 1426 aaPredicted RBP17.6■□□□□ 0.41
CHMP2A-207ENST00000600804 SYNMO15061 1565 aa17.59■□□□□ 0.41
CHMP2A-207ENST00000600804 ERVK-7P63135 1459 aa17.58■□□□□ 0.41
CHMP2A-207ENST00000600804 ANKRD30AQ9BXX3 1397 aa17.58■□□□□ 0.4
CHMP2A-207ENST00000600804 PIP4K2BP78356 416 aa17.58■□□□□ 0.4
CHMP2A-207ENST00000600804 LRRC7Q96NW7 1537 aa17.57■□□□□ 0.4
CHMP2A-207ENST00000600804 SCAF1Q9H7N4 1312 aaKnown RBP17.55■□□□□ 0.4
CHMP2A-207ENST00000600804 ANKLE2Q86XL3 938 aa17.55■□□□□ 0.4
CHMP2A-207ENST00000600804 HFM1A2PYH4 1435 aa17.54■□□□□ 0.4
CHMP2A-207ENST00000600804 DUOX2Q9NRD8 1548 aa17.53■□□□□ 0.4
CHMP2A-207ENST00000600804 THEMISQ8N1K5 641 aaPredicted RBP17.53■□□□□ 0.4
CHMP2A-207ENST00000600804 KIF15Q9NS87 1388 aa17.53■□□□□ 0.4
CHMP2A-207ENST00000600804 PRDM15P57071 1507 aaPredicted RBP17.52■□□□□ 0.4
CHMP2A-207ENST00000600804 PIK3C2BO00750 1634 aa17.52■□□□□ 0.4
CHMP2A-207ENST00000600804 TOM1O60784 492 aa17.52■□□□□ 0.4
CHMP2A-207ENST00000600804 ITGAEP38570 1179 aa17.52■□□□□ 0.4
CHMP2A-207ENST00000600804 CHIC2Q9UKJ5 165 aa17.52■□□□□ 0.4
CHMP2A-207ENST00000600804 GCC2Q8IWJ2 1684 aa17.51■□□□□ 0.39
CHMP2A-207ENST00000600804 NAIPQ13075 1403 aa17.5■□□□□ 0.39
CHMP2A-207ENST00000600804 ERBINQ96RT1 1412 aa17.5■□□□□ 0.39
CHMP2A-207ENST00000600804 ARHGAP23Q9P227 1491 aa17.5■□□□□ 0.39
CHMP2A-207ENST00000600804 SLIT1O75093 1534 aa17.49■□□□□ 0.39
CHMP2A-207ENST00000600804 ANKRD50Q9ULJ7 1429 aa17.47■□□□□ 0.39
CHMP2A-207ENST00000600804 RRP7BPQ9NSQ0 103 aa17.47■□□□□ 0.39
CHMP2A-207ENST00000600804 ACIN1Q9UKV3 1341 aaKnown RBP17.47■□□□□ 0.39
CHMP2A-207ENST00000600804 SCAF11Q99590 1463 aaKnown RBP17.46■□□□□ 0.39
CHMP2A-207ENST00000600804 HRCP23327 699 aa17.45■□□□□ 0.38
CHMP2A-207ENST00000600804 KDM5AP29375 1690 aaKnown RBP17.45■□□□□ 0.38
CHMP2A-207ENST00000600804 LTKP29376 864 aa17.44■□□□□ 0.38
CHMP2A-207ENST00000600804 SETD5Q9C0A6 1442 aa17.44■□□□□ 0.38
CHMP2A-207ENST00000600804 MYO5BQ9ULV0 1848 aa17.44■□□□□ 0.38
CHMP2A-207ENST00000600804 ARHGAP31Q2M1Z3 1444 aa17.43■□□□□ 0.38
CHMP2A-207ENST00000600804 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
CHMP2A-207ENST00000600804 TET3O43151 1660 aa17.39■□□□□ 0.37
CHMP2A-207ENST00000600804 UNC13BO14795 1591 aa17.38■□□□□ 0.37
CHMP2A-207ENST00000600804 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
CHMP2A-207ENST00000600804 ROBO1Q9Y6N7 1651 aa17.38■□□□□ 0.37
CHMP2A-207ENST00000600804 RAB3GAP2Q9H2M9 1393 aa17.37■□□□□ 0.37
CHMP2A-207ENST00000600804 LMTK2Q8IWU2 1503 aa17.37■□□□□ 0.37
CHMP2A-207ENST00000600804 RGS17Q9UGC6 210 aaPredicted RBP17.36■□□□□ 0.37
CHMP2A-207ENST00000600804 EFCAB6Q5THR3 1501 aa17.36■□□□□ 0.37
CHMP2A-207ENST00000600804 NWD1Q149M9 1564 aa17.35■□□□□ 0.37
CHMP2A-207ENST00000600804 TXNDC2Q86VQ3 553 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms