RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 MYO3AQ8NEV4 1616 aa17.95■□□□□ 0.46
HIF3A-217ENST00000600236 KDM5DQ9BY66 1539 aa17.95■□□□□ 0.46
HIF3A-217ENST00000600236 PLA2R1Q13018 1463 aa17.95■□□□□ 0.46
HIF3A-217ENST00000600236 PKD2Q13563 968 aa17.94■□□□□ 0.46
HIF3A-217ENST00000600236 CEP170BQ9Y4F5 1589 aaPredicted RBP17.94■□□□□ 0.46
HIF3A-217ENST00000600236 ZNF142P52746 1687 aaPredicted RBP17.93■□□□□ 0.46
HIF3A-217ENST00000600236 MAST1Q9Y2H9 1570 aa17.91■□□□□ 0.46
HIF3A-217ENST00000600236 A2ML1A8K2U0 1454 aa17.91■□□□□ 0.46
HIF3A-217ENST00000600236 PZPP20742 1482 aa17.91■□□□□ 0.46
HIF3A-217ENST00000600236 NCKAP5LQ9HCH0 1330 aa17.91■□□□□ 0.46
HIF3A-217ENST00000600236 TNRQ92752 1358 aa17.91■□□□□ 0.46
HIF3A-217ENST00000600236 TCOF1Q13428 1488 aaKnown RBP17.88■□□□□ 0.45
HIF3A-217ENST00000600236 FBXO31Q5XUX0 539 aaPredicted RBP17.86■□□□□ 0.45
HIF3A-217ENST00000600236 IQSEC2Q5JU85 1478 aa17.86■□□□□ 0.45
HIF3A-217ENST00000600236 LTBP4Q8N2S1 1624 aa17.85■□□□□ 0.45
HIF3A-217ENST00000600236 EIF2AK4Q9P2K8 1649 aaKnown RBP17.85■□□□□ 0.45
HIF3A-217ENST00000600236 DUOX2Q9NRD8 1548 aa17.84■□□□□ 0.45
HIF3A-217ENST00000600236 SHANK2Q9UPX8 1470 aa17.84■□□□□ 0.45
HIF3A-217ENST00000600236 RNF17Q9BXT8 1623 aaKnown RBP17.83■□□□□ 0.45
HIF3A-217ENST00000600236 NLRP1Q9C000 1473 aa17.83■□□□□ 0.45
HIF3A-217ENST00000600236 DNMT1P26358 1616 aaKnown RBP17.83■□□□□ 0.44
HIF3A-217ENST00000600236 THEMISQ8N1K5 641 aaPredicted RBP17.82■□□□□ 0.44
HIF3A-217ENST00000600236 ZC3H13Q5T200 1668 aaKnown RBP17.82■□□□□ 0.44
HIF3A-217ENST00000600236 KIF15Q9NS87 1388 aa17.81■□□□□ 0.44
HIF3A-217ENST00000600236 ZNF335Q9H4Z2 1342 aaPredicted RBP17.81■□□□□ 0.44
HIF3A-217ENST00000600236 PTPN23Q9H3S7 1636 aa17.81■□□□□ 0.44
HIF3A-217ENST00000600236 ABCC3O15438 1527 aa17.81■□□□□ 0.44
HIF3A-217ENST00000600236 ABCC5O15440 1437 aa17.81■□□□□ 0.44
HIF3A-217ENST00000600236 FGD6Q6ZV73 1430 aa17.81■□□□□ 0.44
HIF3A-217ENST00000600236 ERBINQ96RT1 1412 aa17.81■□□□□ 0.44
HIF3A-217ENST00000600236 ANKLE2Q86XL3 938 aa17.79■□□□□ 0.44
HIF3A-217ENST00000600236 DAPK1P53355 1430 aa17.79■□□□□ 0.44
HIF3A-217ENST00000600236 RRP7BPQ9NSQ0 103 aa17.78■□□□□ 0.44
HIF3A-217ENST00000600236 UGGT1Q9NYU2 1555 aa17.78■□□□□ 0.44
HIF3A-217ENST00000600236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.77■□□□□ 0.43
HIF3A-217ENST00000600236 SPATA31D1Q6ZQQ2 1576 aa17.76■□□□□ 0.43
HIF3A-217ENST00000600236 ANKRD30AQ9BXX3 1397 aa17.76■□□□□ 0.43
HIF3A-217ENST00000600236 ERVK-7P63135 1459 aa17.75■□□□□ 0.43
HIF3A-217ENST00000600236 KANK1Q14678 1352 aa17.75■□□□□ 0.43
HIF3A-217ENST00000600236 CROCC2H7BZ55 1655 aa17.74■□□□□ 0.43
HIF3A-217ENST00000600236 MROH1Q8NDA8 1641 aa17.74■□□□□ 0.43
HIF3A-217ENST00000600236 PRDM15P57071 1507 aaPredicted RBP17.73■□□□□ 0.43
HIF3A-217ENST00000600236 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.72■□□□□ 0.43
HIF3A-217ENST00000600236 POLR1AO95602 1720 aaPredicted RBP17.72■□□□□ 0.43
HIF3A-217ENST00000600236 ARHGAP31Q2M1Z3 1444 aa17.72■□□□□ 0.43
HIF3A-217ENST00000600236 NEURL4Q96JN8 1562 aa17.71■□□□□ 0.43
HIF3A-217ENST00000600236 UBAP1LF5GYI3 381 aa17.71■□□□□ 0.43
HIF3A-217ENST00000600236 CHIC2Q9UKJ5 165 aa17.71■□□□□ 0.43
HIF3A-217ENST00000600236 NPHP4O75161 1426 aaPredicted RBP17.71■□□□□ 0.43
HIF3A-217ENST00000600236 FAM50AQ14320 339 aaKnown RBP17.7■□□□□ 0.42
HIF3A-217ENST00000600236 CPS1P31327 1500 aa17.7■□□□□ 0.42
HIF3A-217ENST00000600236 MED14O60244 1454 aa17.69■□□□□ 0.42
HIF3A-217ENST00000600236 CEP152O94986 1710 aa17.68■□□□□ 0.42
HIF3A-217ENST00000600236 DEPDC5O75140 1603 aa17.68■□□□□ 0.42
HIF3A-217ENST00000600236 ADGRL2O95490 1459 aa17.65■□□□□ 0.42
HIF3A-217ENST00000600236 STAG3Q9UJ98 1225 aa17.64■□□□□ 0.41
HIF3A-217ENST00000600236 DISP3Q9P2K9 1392 aa17.64■□□□□ 0.41
HIF3A-217ENST00000600236 LMTK2Q8IWU2 1503 aa17.63■□□□□ 0.41
HIF3A-217ENST00000600236 TOM1O60784 492 aa17.63■□□□□ 0.41
HIF3A-217ENST00000600236 IQGAP1P46940 1657 aa17.62■□□□□ 0.41
HIF3A-217ENST00000600236 EID1Q9Y6B2 187 aa17.62■□□□□ 0.41
HIF3A-217ENST00000600236 SCAF11Q99590 1463 aaKnown RBP17.62■□□□□ 0.41
HIF3A-217ENST00000600236 ANKRD50Q9ULJ7 1429 aa17.61■□□□□ 0.41
HIF3A-217ENST00000600236 VWDEQ8N2E2 1590 aa17.61■□□□□ 0.41
HIF3A-217ENST00000600236 TXNDC2Q86VQ3 553 aa17.6■□□□□ 0.41
HIF3A-217ENST00000600236 SCAF1Q9H7N4 1312 aaKnown RBP17.6■□□□□ 0.41
HIF3A-217ENST00000600236 UBR1Q8IWV7 1749 aa17.6■□□□□ 0.41
HIF3A-217ENST00000600236 SLIT1O75093 1534 aa17.59■□□□□ 0.41
HIF3A-217ENST00000600236 ARHGAP23Q9P227 1491 aa17.59■□□□□ 0.41
HIF3A-217ENST00000600236 TMEM2Q9UHN6 1383 aa17.56■□□□□ 0.4
HIF3A-217ENST00000600236 PIP4K2BP78356 416 aa17.56■□□□□ 0.4
HIF3A-217ENST00000600236 EFCAB6Q5THR3 1501 aa17.56■□□□□ 0.4
HIF3A-217ENST00000600236 LTKP29376 864 aa17.55■□□□□ 0.4
HIF3A-217ENST00000600236 SLC52A1Q9NWF4 448 aa17.55■□□□□ 0.4
HIF3A-217ENST00000600236 RPRD2Q5VT52 1461 aaKnown RBP17.55■□□□□ 0.4
HIF3A-217ENST00000600236 NOS1P29475 1434 aa17.55■□□□□ 0.4
HIF3A-217ENST00000600236 PIK3C2BO00750 1634 aa17.54■□□□□ 0.4
HIF3A-217ENST00000600236 IDI1Q13907 227 aa17.54■□□□□ 0.4
HIF3A-217ENST00000600236 SYNMO15061 1565 aa17.53■□□□□ 0.4
HIF3A-217ENST00000600236 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
HIF3A-217ENST00000600236 CFAP65Q6ZU64 1925 aaKnown RBP17.52■□□□□ 0.4
HIF3A-217ENST00000600236 LRRC7Q96NW7 1537 aa17.52■□□□□ 0.39
HIF3A-217ENST00000600236 KDM5AP29375 1690 aaKnown RBP17.51■□□□□ 0.39
HIF3A-217ENST00000600236 ADGRB3O60242 1522 aa17.5■□□□□ 0.39
HIF3A-217ENST00000600236 HSPA1LP34931 641 aa17.49■□□□□ 0.39
HIF3A-217ENST00000600236 HDGFP51858 240 aaKnown RBP17.48■□□□□ 0.39
HIF3A-217ENST00000600236 TET3O43151 1660 aa17.46■□□□□ 0.39
HIF3A-217ENST00000600236 UNC13BO14795 1591 aa17.46■□□□□ 0.39
HIF3A-217ENST00000600236 ITGAEP38570 1179 aa17.46■□□□□ 0.39
HIF3A-217ENST00000600236 BCANQ96GW7 911 aa17.46■□□□□ 0.39
HIF3A-217ENST00000600236 ILDR2Q71H61 639 aa17.44■□□□□ 0.38
HIF3A-217ENST00000600236 STRCP1A6NGW2 1772 aa17.43■□□□□ 0.38
HIF3A-217ENST00000600236 PPP1R15AO75807 674 aaPredicted RBP17.43■□□□□ 0.38
HIF3A-217ENST00000600236 KCNA6P17658 529 aa17.43■□□□□ 0.38
HIF3A-217ENST00000600236 PPARGC1BQ86YN6 1023 aaKnown RBP17.43■□□□□ 0.38
HIF3A-217ENST00000600236 NUP155O75694 1391 aa17.42■□□□□ 0.38
HIF3A-217ENST00000600236 SLC26A8Q96RN1 970 aa17.42■□□□□ 0.38
HIF3A-217ENST00000600236 GCC2Q8IWJ2 1684 aa17.42■□□□□ 0.38
HIF3A-217ENST00000600236 CHGAP10645 457 aaKnown RBP17.41■□□□□ 0.38
HIF3A-217ENST00000600236 ALKQ9UM73 1620 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms