RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 TSPY4P0CV99 314 aa27.37■■□□□ 1.97
SMG9-210ENST00000600097 TSPY10P0CW01 314 aa27.37■■□□□ 1.97
SMG9-210ENST00000600097 WASHC2CQ9Y4E1 1318 aa27.37■■□□□ 1.97
SMG9-210ENST00000600097 KDM5DQ9BY66 1539 aa27.36■■□□□ 1.97
SMG9-210ENST00000600097 TNRQ92752 1358 aa27.36■■□□□ 1.97
SMG9-210ENST00000600097 PZPP20742 1482 aa27.35■■□□□ 1.97
SMG9-210ENST00000600097 DNMT1P26358 1616 aaKnown RBP27.34■■□□□ 1.97
SMG9-210ENST00000600097 FBXO31Q5XUX0 539 aaPredicted RBP27.34■■□□□ 1.97
SMG9-210ENST00000600097 ARHGEF5Q12774 1597 aa27.33■■□□□ 1.97
SMG9-210ENST00000600097 UBAP1LF5GYI3 381 aa27.32■■□□□ 1.96
SMG9-210ENST00000600097 ILDR2Q71H61 639 aa27.3■■□□□ 1.96
SMG9-210ENST00000600097 VPS8Q8N3P4 1428 aa27.3■■□□□ 1.96
SMG9-210ENST00000600097 LRRC9Q6ZRR7 1453 aa27.29■■□□□ 1.96
SMG9-210ENST00000600097 SPATA31D1Q6ZQQ2 1576 aa27.26■■□□□ 1.96
SMG9-210ENST00000600097 MIA2Q96PC5 1412 aa27.26■■□□□ 1.95
SMG9-210ENST00000600097 THEMISQ8N1K5 641 aaPredicted RBP27.26■■□□□ 1.95
SMG9-210ENST00000600097 NLRP1Q9C000 1473 aa27.25■■□□□ 1.95
SMG9-210ENST00000600097 ANKLE2Q86XL3 938 aa27.24■■□□□ 1.95
SMG9-210ENST00000600097 SOCS7O14512 581 aa27.22■■□□□ 1.95
SMG9-210ENST00000600097 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.21■■□□□ 1.95
SMG9-210ENST00000600097 MAP3K1Q13233 1512 aa27.21■■□□□ 1.95
SMG9-210ENST00000600097 POLR1AO95602 1720 aaPredicted RBP27.2■■□□□ 1.94
SMG9-210ENST00000600097 NEURL4Q96JN8 1562 aa27.2■■□□□ 1.94
SMG9-210ENST00000600097 MAST1Q9Y2H9 1570 aa27.2■■□□□ 1.94
SMG9-210ENST00000600097 LOC105371045A0A1W2PR82 267 aa27.19■■□□□ 1.94
SMG9-210ENST00000600097 CPS1P31327 1500 aa27.19■■□□□ 1.94
SMG9-210ENST00000600097 UGGT1Q9NYU2 1555 aa27.18■■□□□ 1.94
SMG9-210ENST00000600097 RNF17Q9BXT8 1623 aaKnown RBP27.17■■□□□ 1.94
SMG9-210ENST00000600097 SHANK2Q9UPX8 1470 aa27.17■■□□□ 1.94
SMG9-210ENST00000600097 KANK4Q5T7N3 995 aaPredicted RBP27.16■■□□□ 1.94
SMG9-210ENST00000600097 MYOM3Q5VTT5 1437 aa27.16■■□□□ 1.94
SMG9-210ENST00000600097 ABCC3O15438 1527 aa27.15■■□□□ 1.94
SMG9-210ENST00000600097 MED14O60244 1454 aa27.13■■□□□ 1.93
SMG9-210ENST00000600097 EIF2AK4Q9P2K8 1649 aaKnown RBP27.13■■□□□ 1.93
SMG9-210ENST00000600097 TOM1O60784 492 aa27.13■■□□□ 1.93
SMG9-210ENST00000600097 ZC3H13Q5T200 1668 aaKnown RBP27.13■■□□□ 1.93
SMG9-210ENST00000600097 NPHP4O75161 1426 aaPredicted RBP27.13■■□□□ 1.93
SMG9-210ENST00000600097 DEPDC5O75140 1603 aa27.11■■□□□ 1.93
SMG9-210ENST00000600097 SCAF1Q9H7N4 1312 aaKnown RBP27.08■■□□□ 1.93
SMG9-210ENST00000600097 ERVK-7P63135 1459 aa27.07■■□□□ 1.92
SMG9-210ENST00000600097 DUOX2Q9NRD8 1548 aa27.07■■□□□ 1.92
SMG9-210ENST00000600097 VWDEQ8N2E2 1590 aa27.07■■□□□ 1.92
SMG9-210ENST00000600097 PIP4K2BP78356 416 aa27.06■■□□□ 1.92
SMG9-210ENST00000600097 MROH1Q8NDA8 1641 aa27.05■■□□□ 1.92
SMG9-210ENST00000600097 HSPA1LP34931 641 aa27.02■■□□□ 1.92
SMG9-210ENST00000600097 KIF15Q9NS87 1388 aa27.01■■□□□ 1.91
SMG9-210ENST00000600097 APLP2Q06481 763 aa27.01■■□□□ 1.91
SMG9-210ENST00000600097 IQGAP1P46940 1657 aa27.01■■□□□ 1.91
SMG9-210ENST00000600097 ERBINQ96RT1 1412 aa26.99■■□□□ 1.91
SMG9-210ENST00000600097 ABCC5O15440 1437 aa26.98■■□□□ 1.91
SMG9-210ENST00000600097 ARHGAP31Q2M1Z3 1444 aa26.98■■□□□ 1.91
SMG9-210ENST00000600097 CEP152O94986 1710 aa26.96■■□□□ 1.91
SMG9-210ENST00000600097 RRP7BPQ9NSQ0 103 aa26.96■■□□□ 1.91
SMG9-210ENST00000600097 PRDM15P57071 1507 aaPredicted RBP26.95■■□□□ 1.91
SMG9-210ENST00000600097 SCAF11Q99590 1463 aaKnown RBP26.93■■□□□ 1.9
SMG9-210ENST00000600097 UBR1Q8IWV7 1749 aa26.93■■□□□ 1.9
SMG9-210ENST00000600097 PTPN23Q9H3S7 1636 aa26.92■■□□□ 1.9
SMG9-210ENST00000600097 DAPK1P53355 1430 aa26.91■■□□□ 1.9
SMG9-210ENST00000600097 LRRC7Q96NW7 1537 aa26.91■■□□□ 1.9
SMG9-210ENST00000600097 KANK1Q14678 1352 aa26.91■■□□□ 1.9
SMG9-210ENST00000600097 CROCC2H7BZ55 1655 aa26.9■■□□□ 1.9
SMG9-210ENST00000600097 ARHGAP23Q9P227 1491 aa26.9■■□□□ 1.9
SMG9-210ENST00000600097 TXNDC2Q86VQ3 553 aa26.9■■□□□ 1.9
SMG9-210ENST00000600097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.9■■□□□ 1.9
SMG9-210ENST00000600097 SLIT1O75093 1534 aa26.9■■□□□ 1.9
SMG9-210ENST00000600097 FGD6Q6ZV73 1430 aa26.89■■□□□ 1.89
SMG9-210ENST00000600097 SYNMO15061 1565 aa26.88■■□□□ 1.89
SMG9-210ENST00000600097 CFAP65Q6ZU64 1925 aaKnown RBP26.88■■□□□ 1.89
SMG9-210ENST00000600097 LTKP29376 864 aa26.88■■□□□ 1.89
SMG9-210ENST00000600097 EID1Q9Y6B2 187 aa26.88■■□□□ 1.89
SMG9-210ENST00000600097 ALKQ9UM73 1620 aa26.87■■□□□ 1.89
SMG9-210ENST00000600097 MED1Q15648 1581 aaPredicted RBP26.87■■□□□ 1.89
SMG9-210ENST00000600097 ANKRD30AQ9BXX3 1397 aa26.86■■□□□ 1.89
SMG9-210ENST00000600097 STRCP1A6NGW2 1772 aa26.85■■□□□ 1.89
SMG9-210ENST00000600097 STAG3Q9UJ98 1225 aa26.83■■□□□ 1.89
SMG9-210ENST00000600097 TMEM2Q9UHN6 1383 aa26.82■■□□□ 1.88
SMG9-210ENST00000600097 CHIC2Q9UKJ5 165 aa26.81■■□□□ 1.88
SMG9-210ENST00000600097 LMTK2Q8IWU2 1503 aa26.8■■□□□ 1.88
SMG9-210ENST00000600097 PIK3C2BO00750 1634 aa26.78■■□□□ 1.88
SMG9-210ENST00000600097 IDI1Q13907 227 aa26.77■■□□□ 1.88
SMG9-210ENST00000600097 PHF23Q9BUL5 403 aaPredicted RBP26.76■■□□□ 1.87
SMG9-210ENST00000600097 EFCAB6Q5THR3 1501 aa26.75■■□□□ 1.87
SMG9-210ENST00000600097 KDM5AP29375 1690 aaKnown RBP26.74■■□□□ 1.87
SMG9-210ENST00000600097 ADGRL2O95490 1459 aa26.72■■□□□ 1.87
SMG9-210ENST00000600097 NOS1P29475 1434 aa26.72■■□□□ 1.87
SMG9-210ENST00000600097 SENP3Q9H4L4 574 aaPredicted RBP26.71■■□□□ 1.87
SMG9-210ENST00000600097 SLC52A1Q9NWF4 448 aa26.71■■□□□ 1.87
SMG9-210ENST00000600097 KCNA6P17658 529 aa26.68■■□□□ 1.86
SMG9-210ENST00000600097 FAM50AQ14320 339 aaKnown RBP26.67■■□□□ 1.86
SMG9-210ENST00000600097 ANKRD50Q9ULJ7 1429 aa26.65■■□□□ 1.86
SMG9-210ENST00000600097 TMEM94Q12767 1356 aa26.65■■□□□ 1.86
SMG9-210ENST00000600097 RPRD2Q5VT52 1461 aaKnown RBP26.64■■□□□ 1.86
SMG9-210ENST00000600097 SLC26A8Q96RN1 970 aa26.64■■□□□ 1.86
SMG9-210ENST00000600097 ADGRB3O60242 1522 aa26.64■■□□□ 1.85
SMG9-210ENST00000600097 FAM135BQ49AJ0 1406 aa26.64■■□□□ 1.85
SMG9-210ENST00000600097 TET3O43151 1660 aa26.63■■□□□ 1.85
SMG9-210ENST00000600097 XIRP1Q702N8 1843 aaKnown RBP26.62■■□□□ 1.85
SMG9-210ENST00000600097 PROSER2Q86WR7 435 aaPredicted RBP26.61■■□□□ 1.85
SMG9-210ENST00000600097 BCANQ96GW7 911 aa26.58■■□□□ 1.85
SMG9-210ENST00000600097 NKTRP30414 1462 aaKnown RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms