RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 MED14O60244 1454 aa22.65■■□□□ 1.22
HOMER3-212ENST00000600077 NPHP4O75161 1426 aaPredicted RBP22.65■■□□□ 1.22
HOMER3-212ENST00000600077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.63■■□□□ 1.21
HOMER3-212ENST00000600077 GPATCH8Q9UKJ3 1502 aaKnown RBP22.62■■□□□ 1.21
HOMER3-212ENST00000600077 ADGBQ8N7X0 1667 aa22.62■■□□□ 1.21
HOMER3-212ENST00000600077 DEPDC5O75140 1603 aa22.61■■□□□ 1.21
HOMER3-212ENST00000600077 RNF17Q9BXT8 1623 aaKnown RBP22.6■■□□□ 1.21
HOMER3-212ENST00000600077 CASKIN1Q8WXD9 1431 aa22.6■■□□□ 1.21
HOMER3-212ENST00000600077 FBXO31Q5XUX0 539 aaPredicted RBP22.6■■□□□ 1.21
HOMER3-212ENST00000600077 LRRC7Q96NW7 1537 aa22.6■■□□□ 1.21
HOMER3-212ENST00000600077 CFDP1Q9UEE9 299 aaPredicted RBP22.59■■□□□ 1.21
HOMER3-212ENST00000600077 FAM135AQ9P2D6 1515 aa22.58■■□□□ 1.21
HOMER3-212ENST00000600077 PZPP20742 1482 aa22.58■■□□□ 1.2
HOMER3-212ENST00000600077 NLRP1Q9C000 1473 aa22.58■■□□□ 1.2
HOMER3-212ENST00000600077 SYNMO15061 1565 aa22.57■■□□□ 1.2
HOMER3-212ENST00000600077 UGGT1Q9NYU2 1555 aa22.56■■□□□ 1.2
HOMER3-212ENST00000600077 EHMT2Q96KQ7 1210 aa22.55■■□□□ 1.2
HOMER3-212ENST00000600077 MIA2Q96PC5 1412 aa22.55■■□□□ 1.2
HOMER3-212ENST00000600077 IQGAP1P46940 1657 aa22.55■■□□□ 1.2
HOMER3-212ENST00000600077 POTEAQ6S8J7 498 aa22.54■■□□□ 1.2
HOMER3-212ENST00000600077 DHX29Q7Z478 1369 aaKnown RBP22.53■■□□□ 1.2
HOMER3-212ENST00000600077 KDM5DQ9BY66 1539 aa22.52■■□□□ 1.19
HOMER3-212ENST00000600077 RTEL1-TNFRSF6BF6WH68 1400 aa22.51■■□□□ 1.19
HOMER3-212ENST00000600077 WASHC2CQ9Y4E1 1318 aa22.51■■□□□ 1.19
HOMER3-212ENST00000600077 CCNB3Q8WWL7 1395 aa22.5■■□□□ 1.19
HOMER3-212ENST00000600077 KIF3BO15066 747 aa22.5■■□□□ 1.19
HOMER3-212ENST00000600077 STRCP1A6NGW2 1772 aa22.49■■□□□ 1.19
HOMER3-212ENST00000600077 FAM135BQ49AJ0 1406 aa22.46■■□□□ 1.19
HOMER3-212ENST00000600077 FYCO1Q9BQS8 1478 aa22.46■■□□□ 1.19
HOMER3-212ENST00000600077 MBD5Q9P267 1494 aa22.41■■□□□ 1.18
HOMER3-212ENST00000600077 ZNF644Q9H582 1327 aaPredicted RBP22.37■■□□□ 1.17
HOMER3-212ENST00000600077 ZC3H13Q5T200 1668 aaKnown RBP22.36■■□□□ 1.17
HOMER3-212ENST00000600077 RSPH4AQ5TD94 716 aa22.34■■□□□ 1.17
HOMER3-212ENST00000600077 MTUS2Q5JR59 1369 aa22.34■■□□□ 1.17
HOMER3-212ENST00000600077 SCAF11Q99590 1463 aaKnown RBP22.34■■□□□ 1.17
HOMER3-212ENST00000600077 SETD1AO15047 1707 aaKnown RBP22.33■■□□□ 1.17
HOMER3-212ENST00000600077 UPF1Q92900 1129 aaKnown RBP eCLIP22.31■■□□□ 1.16
HOMER3-212ENST00000600077 XIRP1Q702N8 1843 aaKnown RBP22.31■■□□□ 1.16
HOMER3-212ENST00000600077 TXNDC2Q86VQ3 553 aa22.3■■□□□ 1.16
HOMER3-212ENST00000600077 CCDC141Q6ZP82 1450 aa22.28■■□□□ 1.16
HOMER3-212ENST00000600077 EID1Q9Y6B2 187 aa22.27■■□□□ 1.16
HOMER3-212ENST00000600077 ERVK-7P63135 1459 aa22.27■■□□□ 1.16
HOMER3-212ENST00000600077 TIAM1Q13009 1591 aa22.26■■□□□ 1.15
HOMER3-212ENST00000600077 LTKP29376 864 aa22.26■■□□□ 1.15
HOMER3-212ENST00000600077 LRRC9Q6ZRR7 1453 aa22.26■■□□□ 1.15
HOMER3-212ENST00000600077 ROBO1Q9Y6N7 1651 aa22.26■■□□□ 1.15
HOMER3-212ENST00000600077 UBR1Q8IWV7 1749 aa22.25■■□□□ 1.15
HOMER3-212ENST00000600077 TMEM94Q12767 1356 aa22.25■■□□□ 1.15
HOMER3-212ENST00000600077 JCADQ9P266 1359 aa22.25■■□□□ 1.15
HOMER3-212ENST00000600077 ARHGAP23Q9P227 1491 aa22.24■■□□□ 1.15
HOMER3-212ENST00000600077 SLIT1O75093 1534 aa22.24■■□□□ 1.15
HOMER3-212ENST00000600077 ABCC3O15438 1527 aa22.23■■□□□ 1.15
HOMER3-212ENST00000600077 TSPY4P0CV99 314 aa22.22■■□□□ 1.15
HOMER3-212ENST00000600077 TSPY10P0CW01 314 aa22.22■■□□□ 1.15
HOMER3-212ENST00000600077 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
HOMER3-212ENST00000600077 ZNF772Q68DY9 489 aaPredicted RBP22.22■■□□□ 1.15
HOMER3-212ENST00000600077 NCOA2Q15596 1464 aa22.21■■□□□ 1.15
HOMER3-212ENST00000600077 KCNA6P17658 529 aa22.2■■□□□ 1.14
HOMER3-212ENST00000600077 PROSER2Q86WR7 435 aaPredicted RBP22.19■■□□□ 1.14
HOMER3-212ENST00000600077 EHBP1L1Q8N3D4 1523 aa22.17■■□□□ 1.14
HOMER3-212ENST00000600077 CEP162Q5TB80 1403 aa22.17■■□□□ 1.14
HOMER3-212ENST00000600077 TRIM52Q96A61 297 aa22.16■■□□□ 1.14
HOMER3-212ENST00000600077 SPATA31A6Q5VVP1 1343 aa22.15■■□□□ 1.14
HOMER3-212ENST00000600077 CAMSAP2Q08AD1 1489 aa22.15■■□□□ 1.14
HOMER3-212ENST00000600077 PHLPP1O60346 1717 aa22.14■■□□□ 1.14
HOMER3-212ENST00000600077 MEX3CQ5U5Q3 659 aaKnown RBP22.14■■□□□ 1.13
HOMER3-212ENST00000600077 SLAIN2Q9P270 581 aa22.14■■□□□ 1.13
HOMER3-212ENST00000600077 MAP3K1Q13233 1512 aa22.14■■□□□ 1.13
HOMER3-212ENST00000600077 MSH6P52701 1360 aa22.13■■□□□ 1.13
HOMER3-212ENST00000600077 TMEM2Q9UHN6 1383 aa22.12■■□□□ 1.13
HOMER3-212ENST00000600077 PRDM15P57071 1507 aaPredicted RBP22.11■■□□□ 1.13
HOMER3-212ENST00000600077 RXRBP28702 533 aa22.11■■□□□ 1.13
HOMER3-212ENST00000600077 ARHGEF5Q12774 1597 aa22.11■■□□□ 1.13
HOMER3-212ENST00000600077 EIF2AK4Q9P2K8 1649 aaKnown RBP22.1■■□□□ 1.13
HOMER3-212ENST00000600077 CFAP65Q6ZU64 1925 aaKnown RBP22.1■■□□□ 1.13
HOMER3-212ENST00000600077 FGD6Q6ZV73 1430 aa22.1■■□□□ 1.13
HOMER3-212ENST00000600077 STAG3Q9UJ98 1225 aa22.1■■□□□ 1.13
HOMER3-212ENST00000600077 NKTRP30414 1462 aaKnown RBP22.09■■□□□ 1.13
HOMER3-212ENST00000600077 RBM33Q96EV2 1170 aaKnown RBP22.08■■□□□ 1.13
HOMER3-212ENST00000600077 ARHGAP31Q2M1Z3 1444 aa22.07■■□□□ 1.12
HOMER3-212ENST00000600077 CDK12Q9NYV4 1490 aaPredicted RBP22.07■■□□□ 1.12
HOMER3-212ENST00000600077 SLC26A8Q96RN1 970 aa22.05■■□□□ 1.12
HOMER3-212ENST00000600077 CEP152O94986 1710 aa22.05■■□□□ 1.12
HOMER3-212ENST00000600077 LRP6O75581 1613 aa22.05■■□□□ 1.12
HOMER3-212ENST00000600077 COL16A1Q07092 1604 aaPredicted RBP22.04■■□□□ 1.12
HOMER3-212ENST00000600077 MROH1Q8NDA8 1641 aa22.04■■□□□ 1.12
HOMER3-212ENST00000600077 TET3O43151 1660 aa22.03■■□□□ 1.12
HOMER3-212ENST00000600077 NWD1Q149M9 1564 aa22.02■■□□□ 1.12
HOMER3-212ENST00000600077 MAST1Q9Y2H9 1570 aa22.02■■□□□ 1.12
HOMER3-212ENST00000600077 PIK3C2BO00750 1634 aa22.02■■□□□ 1.11
HOMER3-212ENST00000600077 KDM5AP29375 1690 aaKnown RBP22.01■■□□□ 1.11
HOMER3-212ENST00000600077 EFCAB6Q5THR3 1501 aa22.01■■□□□ 1.11
HOMER3-212ENST00000600077 FOXD1Q16676 465 aa21.99■■□□□ 1.11
HOMER3-212ENST00000600077 BCANQ96GW7 911 aa21.96■■□□□ 1.11
HOMER3-212ENST00000600077 NCOA3Q9Y6Q9 1424 aa21.96■■□□□ 1.11
HOMER3-212ENST00000600077 DUOX2Q9NRD8 1548 aa21.96■■□□□ 1.11
HOMER3-212ENST00000600077 SHPRHQ149N8 1683 aa21.95■■□□□ 1.1
HOMER3-212ENST00000600077 IDI1Q13907 227 aa21.95■■□□□ 1.1
HOMER3-212ENST00000600077 AHDC1Q5TGY3 1603 aaPredicted RBP21.92■■□□□ 1.1
HOMER3-212ENST00000600077 CADPS2Q86UW7 1296 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms