RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 FAM135AQ9P2D6 1515 aa21.99■■□□□ 1.11
VRK3-218ENST00000600031 MAGI2Q86UL8 1455 aa21.99■■□□□ 1.11
VRK3-218ENST00000600031 ABCA6Q8N139 1617 aa21.98■■□□□ 1.11
VRK3-218ENST00000600031 A2MP01023 1474 aa21.97■■□□□ 1.11
VRK3-218ENST00000600031 KIF3BO15066 747 aa21.95■■□□□ 1.11
VRK3-218ENST00000600031 IQGAP3Q86VI3 1631 aa21.95■■□□□ 1.1
VRK3-218ENST00000600031 EIF2AK4Q9P2K8 1649 aaKnown RBP21.95■■□□□ 1.1
VRK3-218ENST00000600031 COL17A1Q9UMD9 1497 aaPredicted RBP21.94■■□□□ 1.1
VRK3-218ENST00000600031 YEATS2Q9ULM3 1422 aa21.94■■□□□ 1.1
VRK3-218ENST00000600031 DEPDC5O75140 1603 aa21.93■■□□□ 1.1
VRK3-218ENST00000600031 ZMYM4Q5VZL5 1548 aa21.93■■□□□ 1.1
VRK3-218ENST00000600031 TIMELESSQ9UNS1 1208 aa21.93■■□□□ 1.1
VRK3-218ENST00000600031 DIP2CQ9Y2E4 1556 aa21.93■■□□□ 1.1
VRK3-218ENST00000600031 TRHP20396 242 aaPredicted RBP21.91■■□□□ 1.1
VRK3-218ENST00000600031 DIEXFQ68CQ4 756 aaKnown RBP21.89■■□□□ 1.09
VRK3-218ENST00000600031 TONSLQ96HA7 1378 aa21.89■■□□□ 1.09
VRK3-218ENST00000600031 MROH1Q8NDA8 1641 aa21.89■■□□□ 1.09
VRK3-218ENST00000600031 SCAF1Q9H7N4 1312 aaKnown RBP21.87■■□□□ 1.09
VRK3-218ENST00000600031 RPRD2Q5VT52 1461 aaKnown RBP21.87■■□□□ 1.09
VRK3-218ENST00000600031 VWDEQ8N2E2 1590 aa21.86■■□□□ 1.09
VRK3-218ENST00000600031 PRDM15P57071 1507 aaPredicted RBP21.86■■□□□ 1.09
VRK3-218ENST00000600031 RNF17Q9BXT8 1623 aaKnown RBP21.84■■□□□ 1.09
VRK3-218ENST00000600031 KANK1Q14678 1352 aa21.84■■□□□ 1.09
VRK3-218ENST00000600031 BCORL1Q5H9F3 1711 aa21.84■■□□□ 1.09
VRK3-218ENST00000600031 PPP1R15AO75807 674 aaPredicted RBP21.83■■□□□ 1.09
VRK3-218ENST00000600031 GGT6Q6P531 493 aa21.81■■□□□ 1.08
VRK3-218ENST00000600031 ATP10AO60312 1499 aa21.81■■□□□ 1.08
VRK3-218ENST00000600031 PLA2R1Q13018 1463 aa21.8■■□□□ 1.08
VRK3-218ENST00000600031 E9PCH4 1651 aa21.79■■□□□ 1.08
VRK3-218ENST00000600031 TET3O43151 1660 aa21.79■■□□□ 1.08
VRK3-218ENST00000600031 ZNF316A6NFI3 1004 aaPredicted RBP21.78■■□□□ 1.08
VRK3-218ENST00000600031 L3MBTL2Q969R5 705 aa21.78■■□□□ 1.08
VRK3-218ENST00000600031 CEP152O94986 1710 aa21.75■■□□□ 1.07
VRK3-218ENST00000600031 LMTK2Q8IWU2 1503 aa21.75■■□□□ 1.07
VRK3-218ENST00000600031 REREQ9P2R6 1566 aa21.75■■□□□ 1.07
VRK3-218ENST00000600031 ARHGEF40Q8TER5 1519 aa21.74■■□□□ 1.07
VRK3-218ENST00000600031 CCDC144AA2RUR9 1427 aa21.73■■□□□ 1.07
VRK3-218ENST00000600031 EFCAB6Q5THR3 1501 aa21.72■■□□□ 1.07
VRK3-218ENST00000600031 PELP1Q8IZL8 1130 aaKnown RBP21.71■■□□□ 1.07
VRK3-218ENST00000600031 WASHC2CQ9Y4E1 1318 aa21.71■■□□□ 1.07
VRK3-218ENST00000600031 SIGLEC1Q9BZZ2 1709 aa21.71■■□□□ 1.07
VRK3-218ENST00000600031 ABCC3O15438 1527 aa21.71■■□□□ 1.07
VRK3-218ENST00000600031 CENPBP07199 599 aaPredicted RBP21.7■■□□□ 1.06
VRK3-218ENST00000600031 AGLP35573 1532 aa21.7■■□□□ 1.06
VRK3-218ENST00000600031 PTPRTO14522 1441 aa21.69■■□□□ 1.06
VRK3-218ENST00000600031 SPHKAPQ2M3C7 1700 aa21.68■■□□□ 1.06
VRK3-218ENST00000600031 TRPM2O94759 1503 aa21.67■■□□□ 1.06
VRK3-218ENST00000600031 NPATQ14207 1427 aa21.65■■□□□ 1.06
VRK3-218ENST00000600031 CAMSAP1Q5T5Y3 1602 aa21.64■■□□□ 1.05
VRK3-218ENST00000600031 ZC3H13Q5T200 1668 aaKnown RBP21.63■■□□□ 1.05
VRK3-218ENST00000600031 NBPF8Q3BBV2 869 aa21.62■■□□□ 1.05
VRK3-218ENST00000600031 CLTCL1P53675 1640 aa21.61■■□□□ 1.05
VRK3-218ENST00000600031 CFAP65Q6ZU64 1925 aaKnown RBP21.61■■□□□ 1.05
VRK3-218ENST00000600031 RGL3Q3MIN7 710 aa21.6■■□□□ 1.05
VRK3-218ENST00000600031 MLECQ14165 292 aa21.59■■□□□ 1.05
VRK3-218ENST00000600031 DCAF11Q8TEB1 546 aa21.58■■□□□ 1.05
VRK3-218ENST00000600031 ARHGAP31Q2M1Z3 1444 aa21.58■■□□□ 1.04
VRK3-218ENST00000600031 UGGT1Q9NYU2 1555 aa21.58■■□□□ 1.04
VRK3-218ENST00000600031 SPATA31E1Q6ZUB1 1445 aa21.57■■□□□ 1.04
VRK3-218ENST00000600031 PPP6R1Q9UPN7 881 aa21.57■■□□□ 1.04
VRK3-218ENST00000600031 KDM2AQ9Y2K7 1162 aa21.56■■□□□ 1.04
VRK3-218ENST00000600031 ARID4BQ4LE39 1312 aaPredicted RBP21.54■■□□□ 1.04
VRK3-218ENST00000600031 ZNF326Q5BKZ1 582 aaKnown RBP21.54■■□□□ 1.04
VRK3-218ENST00000600031 NOS1P29475 1434 aa21.54■■□□□ 1.04
VRK3-218ENST00000600031 UHRF1BP1Q6BDS2 1440 aa21.53■■□□□ 1.04
VRK3-218ENST00000600031 CNTLNQ9NXG0 1405 aa21.53■■□□□ 1.04
VRK3-218ENST00000600031 CLTCQ00610 1675 aaKnown RBP21.53■■□□□ 1.04
VRK3-218ENST00000600031 SYNMO15061 1565 aa21.49■■□□□ 1.03
VRK3-218ENST00000600031 HIRIP3Q9BW71 556 aaPredicted RBP21.49■■□□□ 1.03
VRK3-218ENST00000600031 KIF1BO60333 1816 aa21.48■■□□□ 1.03
VRK3-218ENST00000600031 PREX1Q8TCU6 1659 aa21.47■■□□□ 1.03
VRK3-218ENST00000600031 FBXO31Q5XUX0 539 aaPredicted RBP21.47■■□□□ 1.03
VRK3-218ENST00000600031 NEURL4Q96JN8 1562 aa21.47■■□□□ 1.03
VRK3-218ENST00000600031 PRAG1Q86YV5 1406 aa21.46■■□□□ 1.03
VRK3-218ENST00000600031 PIK3C2BO00750 1634 aa21.45■■□□□ 1.02
VRK3-218ENST00000600031 ESF1Q9H501 851 aaKnown RBP21.44■■□□□ 1.02
VRK3-218ENST00000600031 MROH2AA6NES4 1674 aa21.44■■□□□ 1.02
VRK3-218ENST00000600031 GTF3C3Q9Y5Q9 886 aa21.44■■□□□ 1.02
VRK3-218ENST00000600031 ERVK-7P63135 1459 aa21.44■■□□□ 1.02
VRK3-218ENST00000600031 RALGAPBQ86X10 1494 aa21.44■■□□□ 1.02
VRK3-218ENST00000600031 ADGRB3O60242 1522 aa21.43■■□□□ 1.02
VRK3-218ENST00000600031 CHGAP10645 457 aaKnown RBP21.43■■□□□ 1.02
VRK3-218ENST00000600031 HSPA5P11021 654 aaKnown RBP21.42■■□□□ 1.02
VRK3-218ENST00000600031 IDI1Q13907 227 aa21.42■■□□□ 1.02
VRK3-218ENST00000600031 ZMYM3Q14202 1370 aa21.42■■□□□ 1.02
VRK3-218ENST00000600031 EIF4G2P78344 907 aaKnown RBP eCLIP21.41■■□□□ 1.02
VRK3-218ENST00000600031 SLC52A1Q9NWF4 448 aa21.4■■□□□ 1.02
VRK3-218ENST00000600031 TRPM1Q7Z4N2 1603 aa21.39■■□□□ 1.01
VRK3-218ENST00000600031 STAC3Q96MF2 364 aa21.38■■□□□ 1.01
VRK3-218ENST00000600031 SPATA31D1Q6ZQQ2 1576 aa21.38■■□□□ 1.01
VRK3-218ENST00000600031 MIER1Q8N108 512 aa21.37■■□□□ 1.01
VRK3-218ENST00000600031 MADDQ8WXG6 1647 aa21.36■■□□□ 1.01
VRK3-218ENST00000600031 IFT172Q9UG01 1749 aa21.36■■□□□ 1.01
VRK3-218ENST00000600031 NBPF1Q3BBV0 1214 aa21.35■■□□□ 1.01
VRK3-218ENST00000600031 CARD11Q9BXL7 1154 aa21.35■■□□□ 1.01
VRK3-218ENST00000600031 ROCK2O75116 1388 aaKnown RBP21.35■■□□□ 1.01
VRK3-218ENST00000600031 MYOM2P54296 1465 aa21.33■■□□□ 1.01
VRK3-218ENST00000600031 ADGRF5Q8IZF2 1346 aa21.33■■□□□ 1
VRK3-218ENST00000600031 USP47Q96K76 1375 aa21.33■■□□□ 1
VRK3-218ENST00000600031 TMEM131LA2VDJ0 1609 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms