RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 PPP6R1Q9UPN7 881 aa12.41□□□□□ -0.42
CHMP2A-205ENST00000600006 ZNF142P52746 1687 aaPredicted RBP12.41□□□□□ -0.42
CHMP2A-205ENST00000600006 MYO3AQ8NEV4 1616 aa12.4□□□□□ -0.42
CHMP2A-205ENST00000600006 GGT6Q6P531 493 aa12.4□□□□□ -0.42
CHMP2A-205ENST00000600006 ZMYM3Q14202 1370 aa12.4□□□□□ -0.42
CHMP2A-205ENST00000600006 DEPDC5O75140 1603 aa12.4□□□□□ -0.42
CHMP2A-205ENST00000600006 ADGRL2O95490 1459 aa12.4□□□□□ -0.43
CHMP2A-205ENST00000600006 ERBINQ96RT1 1412 aa12.39□□□□□ -0.43
CHMP2A-205ENST00000600006 KIF3BO15066 747 aa12.39□□□□□ -0.43
CHMP2A-205ENST00000600006 KIF15Q9NS87 1388 aa12.39□□□□□ -0.43
CHMP2A-205ENST00000600006 PTPRKQ15262 1439 aa12.38□□□□□ -0.43
CHMP2A-205ENST00000600006 PRDM15P57071 1507 aaPredicted RBP12.38□□□□□ -0.43
CHMP2A-205ENST00000600006 ABCC3O15438 1527 aa12.37□□□□□ -0.43
CHMP2A-205ENST00000600006 CEP152O94986 1710 aa12.37□□□□□ -0.43
CHMP2A-205ENST00000600006 PZPP20742 1482 aa12.37□□□□□ -0.43
CHMP2A-205ENST00000600006 STRCQ7RTU9 1775 aa12.36□□□□□ -0.43
CHMP2A-205ENST00000600006 HSPA2P54652 639 aa12.36□□□□□ -0.43
CHMP2A-205ENST00000600006 CAMSAP1Q5T5Y3 1602 aa12.36□□□□□ -0.43
CHMP2A-205ENST00000600006 CEP170BQ9Y4F5 1589 aaPredicted RBP12.35□□□□□ -0.43
CHMP2A-205ENST00000600006 ANKRD30AQ9BXX3 1397 aa12.35□□□□□ -0.43
CHMP2A-205ENST00000600006 NCOA1Q15788 1441 aa12.35□□□□□ -0.43
CHMP2A-205ENST00000600006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.32□□□□□ -0.44
CHMP2A-205ENST00000600006 SPATA31D1Q6ZQQ2 1576 aa12.32□□□□□ -0.44
CHMP2A-205ENST00000600006 VWDEQ8N2E2 1590 aa12.32□□□□□ -0.44
CHMP2A-205ENST00000600006 FAM50AQ14320 339 aaKnown RBP12.32□□□□□ -0.44
CHMP2A-205ENST00000600006 RRP7BPQ9NSQ0 103 aa12.31□□□□□ -0.44
CHMP2A-205ENST00000600006 WASHC2CQ9Y4E1 1318 aa12.31□□□□□ -0.44
CHMP2A-205ENST00000600006 A2ML1A8K2U0 1454 aa12.3□□□□□ -0.44
CHMP2A-205ENST00000600006 LMTK2Q8IWU2 1503 aa12.3□□□□□ -0.44
CHMP2A-205ENST00000600006 RRBP1Q9P2E9 1410 aaKnown RBP12.29□□□□□ -0.44
CHMP2A-205ENST00000600006 PLA2R1Q13018 1463 aa12.29□□□□□ -0.44
CHMP2A-205ENST00000600006 CHIC2Q9UKJ5 165 aa12.29□□□□□ -0.44
CHMP2A-205ENST00000600006 UNC13BO14795 1591 aa12.29□□□□□ -0.44
CHMP2A-205ENST00000600006 TNRQ92752 1358 aa12.29□□□□□ -0.44
CHMP2A-205ENST00000600006 ERVK-7P63135 1459 aa12.28□□□□□ -0.44
CHMP2A-205ENST00000600006 ROCK1Q13464 1354 aa12.28□□□□□ -0.44
CHMP2A-205ENST00000600006 ARHGAP31Q2M1Z3 1444 aa12.28□□□□□ -0.44
CHMP2A-205ENST00000600006 ANKRD50Q9ULJ7 1429 aa12.28□□□□□ -0.44
CHMP2A-205ENST00000600006 NLRP1Q9C000 1473 aa12.27□□□□□ -0.44
CHMP2A-205ENST00000600006 PPARGC1BQ86YN6 1023 aaKnown RBP12.27□□□□□ -0.45
CHMP2A-205ENST00000600006 POLR1AO95602 1720 aaPredicted RBP12.27□□□□□ -0.45
CHMP2A-205ENST00000600006 EFCAB6Q5THR3 1501 aa12.27□□□□□ -0.45
CHMP2A-205ENST00000600006 FBXO31Q5XUX0 539 aaPredicted RBP12.26□□□□□ -0.45
CHMP2A-205ENST00000600006 PTPRTO14522 1441 aa12.26□□□□□ -0.45
CHMP2A-205ENST00000600006 KANK1Q14678 1352 aa12.25□□□□□ -0.45
CHMP2A-205ENST00000600006 TET3O43151 1660 aa12.25□□□□□ -0.45
CHMP2A-205ENST00000600006 CFAP65Q6ZU64 1925 aaKnown RBP12.24□□□□□ -0.45
CHMP2A-205ENST00000600006 GCC2Q8IWJ2 1684 aa12.24□□□□□ -0.45
CHMP2A-205ENST00000600006 UBR1Q8IWV7 1749 aa12.23□□□□□ -0.45
CHMP2A-205ENST00000600006 UGGT1Q9NYU2 1555 aa12.23□□□□□ -0.45
CHMP2A-205ENST00000600006 IQGAP3Q86VI3 1631 aa12.22□□□□□ -0.45
CHMP2A-205ENST00000600006 NEURL4Q96JN8 1562 aa12.22□□□□□ -0.45
CHMP2A-205ENST00000600006 DMRT2Q9Y5R5 561 aa12.22□□□□□ -0.45
CHMP2A-205ENST00000600006 KDM5AP29375 1690 aaKnown RBP12.22□□□□□ -0.45
CHMP2A-205ENST00000600006 SYNMO15061 1565 aa12.21□□□□□ -0.46
CHMP2A-205ENST00000600006 RPRD2Q5VT52 1461 aaKnown RBP12.21□□□□□ -0.46
CHMP2A-205ENST00000600006 PIK3C2BO00750 1634 aa12.2□□□□□ -0.46
CHMP2A-205ENST00000600006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.2□□□□□ -0.461e-7■■■■□ 23.8
CHMP2A-205ENST00000600006 PKD2Q13563 968 aa12.19□□□□□ -0.46
CHMP2A-205ENST00000600006 E9PCH4 1651 aa12.19□□□□□ -0.46
CHMP2A-205ENST00000600006 NOS1P29475 1434 aa12.19□□□□□ -0.46
CHMP2A-205ENST00000600006 LTBP4Q8N2S1 1624 aa12.18□□□□□ -0.46
CHMP2A-205ENST00000600006 NCKAP5LQ9HCH0 1330 aa12.17□□□□□ -0.46
CHMP2A-205ENST00000600006 ITGAEP38570 1179 aa12.17□□□□□ -0.46
CHMP2A-205ENST00000600006 MED14O60244 1454 aa12.16□□□□□ -0.46
CHMP2A-205ENST00000600006 ADGRB3O60242 1522 aa12.16□□□□□ -0.46
CHMP2A-205ENST00000600006 SLIT1O75093 1534 aa12.16□□□□□ -0.46
CHMP2A-205ENST00000600006 IQGAP1P46940 1657 aa12.16□□□□□ -0.46
CHMP2A-205ENST00000600006 ARHGAP23Q9P227 1491 aa12.15□□□□□ -0.46
CHMP2A-205ENST00000600006 NAIPQ13075 1403 aa12.15□□□□□ -0.46
CHMP2A-205ENST00000600006 THEMISQ8N1K5 641 aaPredicted RBP12.15□□□□□ -0.46
CHMP2A-205ENST00000600006 HFM1A2PYH4 1435 aa12.14□□□□□ -0.47
CHMP2A-205ENST00000600006 ILDR1Q86SU0 546 aaPredicted RBP12.13□□□□□ -0.47
CHMP2A-205ENST00000600006 IQSEC2Q5JU85 1478 aa12.13□□□□□ -0.47
CHMP2A-205ENST00000600006 NPHP4O75161 1426 aaPredicted RBP12.12□□□□□ -0.47
CHMP2A-205ENST00000600006 SPHKAPQ2M3C7 1700 aa12.12□□□□□ -0.47
CHMP2A-205ENST00000600006 MYO5BQ9ULV0 1848 aa12.12□□□□□ -0.47
CHMP2A-205ENST00000600006 CERKQ8TCT0 537 aa12.12□□□□□ -0.47
CHMP2A-205ENST00000600006 SCAF11Q99590 1463 aaKnown RBP12.12□□□□□ -0.47
CHMP2A-205ENST00000600006 NUP155O75694 1391 aa12.11□□□□□ -0.47
CHMP2A-205ENST00000600006 FBXO41Q8TF61 875 aa12.11□□□□□ -0.47
CHMP2A-205ENST00000600006 TMEM131LA2VDJ0 1609 aa12.11□□□□□ -0.47
CHMP2A-205ENST00000600006 ANKLE2Q86XL3 938 aa12.1□□□□□ -0.47
CHMP2A-205ENST00000600006 TMEM2Q9UHN6 1383 aa12.09□□□□□ -0.47
CHMP2A-205ENST00000600006 IDI1Q13907 227 aa12.09□□□□□ -0.47
CHMP2A-205ENST00000600006 ZNF335Q9H4Z2 1342 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-205ENST00000600006 CPS1P31327 1500 aa12.08□□□□□ -0.48
CHMP2A-205ENST00000600006 SLC52A1Q9NWF4 448 aa12.08□□□□□ -0.48
CHMP2A-205ENST00000600006 STRCP1A6NGW2 1772 aa12.07□□□□□ -0.48
CHMP2A-205ENST00000600006 TRPM2O94759 1503 aa12.06□□□□□ -0.48
CHMP2A-205ENST00000600006 ZFYVE9O95405 1425 aa12.05□□□□□ -0.48
CHMP2A-205ENST00000600006 LTKP29376 864 aa12.04□□□□□ -0.48
CHMP2A-205ENST00000600006 STAG3Q9UJ98 1225 aa12.04□□□□□ -0.48
CHMP2A-205ENST00000600006 CLTCL1P53675 1640 aa12.04□□□□□ -0.48
CHMP2A-205ENST00000600006 TXNDC2Q86VQ3 553 aa12.03□□□□□ -0.48
CHMP2A-205ENST00000600006 EID1Q9Y6B2 187 aa12.02□□□□□ -0.49
CHMP2A-205ENST00000600006 KIF1BO60333 1816 aa12.01□□□□□ -0.49
CHMP2A-205ENST00000600006 RIMS2Q9UQ26 1411 aa12.01□□□□□ -0.49
CHMP2A-205ENST00000600006 NWD1Q149M9 1564 aa12.01□□□□□ -0.49
CHMP2A-205ENST00000600006 XIRP1Q702N8 1843 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms