RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 KDM5DQ9BY66 1539 aa43.52■■■■■ 4.56
ZNF558-206ENST00000599938 KIF15Q9NS87 1388 aa43.52■■■■■ 4.56
ZNF558-206ENST00000599938 RNF17Q9BXT8 1623 aaKnown RBP43.51■■■■■ 4.56
ZNF558-206ENST00000599938 FAM50AQ14320 339 aaKnown RBP43.51■■■■■ 4.56
ZNF558-206ENST00000599938 NPATQ14207 1427 aa43.5■■■■■ 4.55
ZNF558-206ENST00000599938 PPARGC1BQ86YN6 1023 aaKnown RBP43.45■■■■■ 4.55
ZNF558-206ENST00000599938 RRP7BPQ9NSQ0 103 aa43.41■■■■■ 4.54
ZNF558-206ENST00000599938 ANKRD30AQ9BXX3 1397 aa43.41■■■■■ 4.54
ZNF558-206ENST00000599938 PTPRKQ15262 1439 aa43.4■■■■■ 4.54
ZNF558-206ENST00000599938 ERBINQ96RT1 1412 aa43.4■■■■■ 4.54
ZNF558-206ENST00000599938 CHIC2Q9UKJ5 165 aa43.4■■■■■ 4.54
ZNF558-206ENST00000599938 WASHC2CQ9Y4E1 1318 aa43.39■■■■■ 4.54
ZNF558-206ENST00000599938 MROH1Q8NDA8 1641 aa43.37■■■■■ 4.53
ZNF558-206ENST00000599938 ZC3H13Q5T200 1668 aaKnown RBP43.36■■■■■ 4.53
ZNF558-206ENST00000599938 ADGRL2O95490 1459 aa43.34■■■■■ 4.53
ZNF558-206ENST00000599938 MYO3AQ8NEV4 1616 aa43.33■■■■■ 4.53
ZNF558-206ENST00000599938 ABCC3O15438 1527 aa43.32■■■■■ 4.53
ZNF558-206ENST00000599938 NCOA1Q15788 1441 aa43.32■■■■■ 4.53
ZNF558-206ENST00000599938 PZPP20742 1482 aa43.32■■■■■ 4.52
ZNF558-206ENST00000599938 PRDM15P57071 1507 aaPredicted RBP43.27■■■■■ 4.52
ZNF558-206ENST00000599938 ZNF142P52746 1687 aaPredicted RBP43.26■■■■■ 4.52
ZNF558-206ENST00000599938 CEP152O94986 1710 aa43.25■■■■■ 4.51
ZNF558-206ENST00000599938 DEPDC5O75140 1603 aa43.23■■■■■ 4.51
ZNF558-206ENST00000599938 CEP170BQ9Y4F5 1589 aaPredicted RBP43.22■■■■■ 4.51
ZNF558-206ENST00000599938 CAMSAP1Q5T5Y3 1602 aa43.19■■■■■ 4.5
ZNF558-206ENST00000599938 STRCQ7RTU9 1775 aa43.18■■■■■ 4.5
ZNF558-206ENST00000599938 TNRQ92752 1358 aa43.17■■■■■ 4.5
ZNF558-206ENST00000599938 FBXO31Q5XUX0 539 aaPredicted RBP43.17■■■■■ 4.5
ZNF558-206ENST00000599938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.16■■■■■ 4.5
ZNF558-206ENST00000599938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP43.11■■■■■ 4.49
ZNF558-206ENST00000599938 KANK1Q14678 1352 aa43.1■■■■■ 4.49
ZNF558-206ENST00000599938 ANKRD50Q9ULJ7 1429 aa43.1■■■■■ 4.49
ZNF558-206ENST00000599938 A2ML1A8K2U0 1454 aa43.1■■■■■ 4.49
ZNF558-206ENST00000599938 RRBP1Q9P2E9 1410 aaKnown RBP43.07■■■■■ 4.49
ZNF558-206ENST00000599938 ROCK1Q13464 1354 aa43.07■■■■■ 4.49
ZNF558-206ENST00000599938 ITGAEP38570 1179 aa43.06■■■■■ 4.48
ZNF558-206ENST00000599938 SPATA31D1Q6ZQQ2 1576 aa43.06■■■■■ 4.48
ZNF558-206ENST00000599938 ERVK-7P63135 1459 aa43.05■■■■■ 4.48
ZNF558-206ENST00000599938 VWDEQ8N2E2 1590 aa43.02■■■■■ 4.48
ZNF558-206ENST00000599938 DMRT2Q9Y5R5 561 aa43.01■■■■■ 4.48
ZNF558-206ENST00000599938 NLRP1Q9C000 1473 aa43■■■■■ 4.47
ZNF558-206ENST00000599938 PLA2R1Q13018 1463 aa43■■■■■ 4.47
ZNF558-206ENST00000599938 ARHGAP31Q2M1Z3 1444 aa42.98■■■■■ 4.47
ZNF558-206ENST00000599938 LMTK2Q8IWU2 1503 aa42.98■■■■■ 4.47
ZNF558-206ENST00000599938 CFAP65Q6ZU64 1925 aaKnown RBP42.97■■■■■ 4.47
ZNF558-206ENST00000599938 PTPRTO14522 1441 aa42.94■■■■■ 4.46
ZNF558-206ENST00000599938 UNC13BO14795 1591 aa42.9■■■■■ 4.46
ZNF558-206ENST00000599938 EFCAB6Q5THR3 1501 aa42.9■■■■■ 4.46
ZNF558-206ENST00000599938 UGGT1Q9NYU2 1555 aa42.89■■■■■ 4.46
ZNF558-206ENST00000599938 NCKAP5LQ9HCH0 1330 aa42.86■■■■■ 4.45
ZNF558-206ENST00000599938 PKD2Q13563 968 aa42.83■■■■■ 4.45
ZNF558-206ENST00000599938 POLR1AO95602 1720 aaPredicted RBP42.8■■■■■ 4.44
ZNF558-206ENST00000599938 TET3O43151 1660 aa42.79■■■■■ 4.44
ZNF558-206ENST00000599938 THEMISQ8N1K5 641 aaPredicted RBP42.77■■■■■ 4.44
ZNF558-206ENST00000599938 GCC2Q8IWJ2 1684 aa42.73■■■■■ 4.43
ZNF558-206ENST00000599938 UBR1Q8IWV7 1749 aa42.73■■■■■ 4.43
ZNF558-206ENST00000599938 IQGAP3Q86VI3 1631 aa42.72■■■■■ 4.43
ZNF558-206ENST00000599938 RPRD2Q5VT52 1461 aaKnown RBP42.72■■■■■ 4.43
ZNF558-206ENST00000599938 ILDR1Q86SU0 546 aaPredicted RBP42.71■■■■■ 4.43
ZNF558-206ENST00000599938 SYNMO15061 1565 aa42.7■■■■■ 4.43
ZNF558-206ENST00000599938 NEURL4Q96JN8 1562 aa42.7■■■■■ 4.43
ZNF558-206ENST00000599938 NOS1P29475 1434 aa42.68■■■■■ 4.42
ZNF558-206ENST00000599938 PIK3C2BO00750 1634 aa42.68■■■■■ 4.42
ZNF558-206ENST00000599938 ANKLE2Q86XL3 938 aa42.64■■■■■ 4.42
ZNF558-206ENST00000599938 NUP155O75694 1391 aa42.64■■■■■ 4.42
ZNF558-206ENST00000599938 CERKQ8TCT0 537 aa42.63■■■■■ 4.41
ZNF558-206ENST00000599938 NAIPQ13075 1403 aa42.63■■■■■ 4.41
ZNF558-206ENST00000599938 E9PCH4 1651 aa42.6■■■■■ 4.41
ZNF558-206ENST00000599938 LTBP4Q8N2S1 1624 aa42.58■■■■■ 4.41
ZNF558-206ENST00000599938 FBXO41Q8TF61 875 aa42.57■■■■■ 4.41
ZNF558-206ENST00000599938 KDM5AP29375 1690 aaKnown RBP42.57■■■■■ 4.4
ZNF558-206ENST00000599938 HFM1A2PYH4 1435 aa42.56■■■■■ 4.4
ZNF558-206ENST00000599938 MED14O60244 1454 aa42.54■■■■■ 4.4
ZNF558-206ENST00000599938 NPHP4O75161 1426 aaPredicted RBP42.54■■■■■ 4.4
ZNF558-206ENST00000599938 SLIT1O75093 1534 aa42.53■■■■■ 4.4
ZNF558-206ENST00000599938 IDI1Q13907 227 aa42.53■■■■■ 4.4
ZNF558-206ENST00000599938 STAG3Q9UJ98 1225 aa42.53■■■■■ 4.4
ZNF558-206ENST00000599938 ADGRB3O60242 1522 aa42.52■■■■■ 4.4
ZNF558-206ENST00000599938 ARHGAP23Q9P227 1491 aa42.52■■■■■ 4.4
ZNF558-206ENST00000599938 ZNF335Q9H4Z2 1342 aaPredicted RBP42.51■■■■■ 4.4
ZNF558-206ENST00000599938 IQGAP1P46940 1657 aa42.51■■■■■ 4.4
ZNF558-206ENST00000599938 SCAF11Q99590 1463 aaKnown RBP42.5■■■■■ 4.39
ZNF558-206ENST00000599938 SLC52A1Q9NWF4 448 aa42.49■■■■■ 4.39
ZNF558-206ENST00000599938 TMEM2Q9UHN6 1383 aa42.44■■■■■ 4.38
ZNF558-206ENST00000599938 TXNDC2Q86VQ3 553 aa42.39■■■■■ 4.38
ZNF558-206ENST00000599938 EID1Q9Y6B2 187 aa42.39■■■■■ 4.38
ZNF558-206ENST00000599938 LTKP29376 864 aa42.37■■■■■ 4.37
ZNF558-206ENST00000599938 IQSEC2Q5JU85 1478 aa42.35■■■■■ 4.37
ZNF558-206ENST00000599938 SPHKAPQ2M3C7 1700 aa42.34■■■■■ 4.37
ZNF558-206ENST00000599938 MYO5BQ9ULV0 1848 aa42.34■■■■■ 4.37
ZNF558-206ENST00000599938 TMEM131LA2VDJ0 1609 aa42.32■■■■■ 4.37
ZNF558-206ENST00000599938 TRIM52Q96A61 297 aa42.29■■■■■ 4.36
ZNF558-206ENST00000599938 CPS1P31327 1500 aa42.28■■■■■ 4.36
ZNF558-206ENST00000599938 CHGAP10645 457 aaKnown RBP42.24■■■■■ 4.35
ZNF558-206ENST00000599938 ZFYVE9O95405 1425 aa42.2■■■■■ 4.35
ZNF558-206ENST00000599938 RIMS2Q9UQ26 1411 aa42.19■■■■■ 4.34
ZNF558-206ENST00000599938 TRPM2O94759 1503 aa42.17■■■■■ 4.34
ZNF558-206ENST00000599938 STRCP1A6NGW2 1772 aa42.15■■■■■ 4.34
ZNF558-206ENST00000599938 SLC4A1APQ9BWU0 796 aaKnown RBP42.14■■■■■ 4.34
ZNF558-206ENST00000599938 CLTCL1P53675 1640 aa42.12■■■■■ 4.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms