RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 SHANK2Q9UPX8 1470 aa22.25■■□□□ 1.15
IRF3-224ENST00000599680 ZNF142P52746 1687 aaPredicted RBP22.24■■□□□ 1.15
IRF3-224ENST00000599680 TCOF1Q13428 1488 aaKnown RBP22.24■■□□□ 1.15
IRF3-224ENST00000599680 ZC3H13Q5T200 1668 aaKnown RBP22.23■■□□□ 1.15
IRF3-224ENST00000599680 DUOX2Q9NRD8 1548 aa22.23■■□□□ 1.15
IRF3-224ENST00000599680 DAPK1P53355 1430 aa22.22■■□□□ 1.15
IRF3-224ENST00000599680 PTPRKQ15262 1439 aa22.21■■□□□ 1.15
IRF3-224ENST00000599680 WASHC2CQ9Y4E1 1318 aa22.2■■□□□ 1.14
IRF3-224ENST00000599680 ABCC5O15440 1437 aa22.2■■□□□ 1.14
IRF3-224ENST00000599680 CEP152O94986 1710 aa22.2■■□□□ 1.14
IRF3-224ENST00000599680 CEP170BQ9Y4F5 1589 aaPredicted RBP22.18■■□□□ 1.14
IRF3-224ENST00000599680 KIF15Q9NS87 1388 aa22.17■■□□□ 1.14
IRF3-224ENST00000599680 DMRT2Q9Y5R5 561 aa22.17■■□□□ 1.14
IRF3-224ENST00000599680 CFAP65Q6ZU64 1925 aaKnown RBP22.16■■□□□ 1.14
IRF3-224ENST00000599680 CAMSAP1Q5T5Y3 1602 aa22.16■■□□□ 1.14
IRF3-224ENST00000599680 FAM50AQ14320 339 aaKnown RBP22.15■■□□□ 1.14
IRF3-224ENST00000599680 PZPP20742 1482 aa22.15■■□□□ 1.14
IRF3-224ENST00000599680 ILDR1Q86SU0 546 aaPredicted RBP22.14■■□□□ 1.13
IRF3-224ENST00000599680 MROH1Q8NDA8 1641 aa22.13■■□□□ 1.13
IRF3-224ENST00000599680 RRP7BPQ9NSQ0 103 aa22.13■■□□□ 1.13
IRF3-224ENST00000599680 ERBINQ96RT1 1412 aa22.13■■□□□ 1.13
IRF3-224ENST00000599680 ABCC3O15438 1527 aa22.12■■□□□ 1.13
IRF3-224ENST00000599680 CHIC2Q9UKJ5 165 aa22.12■■□□□ 1.13
IRF3-224ENST00000599680 ANKRD30AQ9BXX3 1397 aa22.12■■□□□ 1.13
IRF3-224ENST00000599680 NCOA1Q15788 1441 aa22.1■■□□□ 1.13
IRF3-224ENST00000599680 TNRQ92752 1358 aa22.1■■□□□ 1.13
IRF3-224ENST00000599680 DEPDC5O75140 1603 aa22.09■■□□□ 1.13
IRF3-224ENST00000599680 A2ML1A8K2U0 1454 aa22.09■■□□□ 1.13
IRF3-224ENST00000599680 PRDM15P57071 1507 aaPredicted RBP22.09■■□□□ 1.13
IRF3-224ENST00000599680 POLR1AO95602 1720 aaPredicted RBP22.08■■□□□ 1.12
IRF3-224ENST00000599680 PTPRTO14522 1441 aa22.07■■□□□ 1.12
IRF3-224ENST00000599680 FBXO31Q5XUX0 539 aaPredicted RBP22.07■■□□□ 1.12
IRF3-224ENST00000599680 ADGRL2O95490 1459 aa22.05■■□□□ 1.12
IRF3-224ENST00000599680 PLA2R1Q13018 1463 aa22.04■■□□□ 1.12
IRF3-224ENST00000599680 KANK1Q14678 1352 aa22.04■■□□□ 1.12
IRF3-224ENST00000599680 PPARGC1BQ86YN6 1023 aaKnown RBP22.03■■□□□ 1.12
IRF3-224ENST00000599680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.03■■□□□ 1.12
IRF3-224ENST00000599680 FBXO41Q8TF61 875 aa22.02■■□□□ 1.12
IRF3-224ENST00000599680 SPATA31D1Q6ZQQ2 1576 aa22.02■■□□□ 1.12
IRF3-224ENST00000599680 NLRP1Q9C000 1473 aa22.02■■□□□ 1.12
IRF3-224ENST00000599680 NCKAP5LQ9HCH0 1330 aa22■■□□□ 1.11
IRF3-224ENST00000599680 UGGT1Q9NYU2 1555 aa21.99■■□□□ 1.11
IRF3-224ENST00000599680 ERVK-7P63135 1459 aa21.99■■□□□ 1.11
IRF3-224ENST00000599680 PKD2Q13563 968 aa21.99■■□□□ 1.11
IRF3-224ENST00000599680 CERKQ8TCT0 537 aa21.99■■□□□ 1.11
IRF3-224ENST00000599680 THEMISQ8N1K5 641 aaPredicted RBP21.94■■□□□ 1.1
IRF3-224ENST00000599680 ARHGAP31Q2M1Z3 1444 aa21.94■■□□□ 1.1
IRF3-224ENST00000599680 ANKRD50Q9ULJ7 1429 aa21.94■■□□□ 1.1
IRF3-224ENST00000599680 UBR1Q8IWV7 1749 aa21.94■■□□□ 1.1
IRF3-224ENST00000599680 VWDEQ8N2E2 1590 aa21.93■■□□□ 1.1
IRF3-224ENST00000599680 LMTK2Q8IWU2 1503 aa21.92■■□□□ 1.1
IRF3-224ENST00000599680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.91■■□□□ 1.1
IRF3-224ENST00000599680 ITGAEP38570 1179 aa21.91■■□□□ 1.1
IRF3-224ENST00000599680 GCC2Q8IWJ2 1684 aa21.9■■□□□ 1.1
IRF3-224ENST00000599680 NEURL4Q96JN8 1562 aa21.9■■□□□ 1.1
IRF3-224ENST00000599680 EFCAB6Q5THR3 1501 aa21.9■■□□□ 1.1
IRF3-224ENST00000599680 LTBP4Q8N2S1 1624 aa21.89■■□□□ 1.09
IRF3-224ENST00000599680 UNC13BO14795 1591 aa21.89■■□□□ 1.09
IRF3-224ENST00000599680 TET3O43151 1660 aa21.88■■□□□ 1.09
IRF3-224ENST00000599680 ROCK1Q13464 1354 aa21.88■■□□□ 1.09
IRF3-224ENST00000599680 ANKLE2Q86XL3 938 aa21.88■■□□□ 1.09
IRF3-224ENST00000599680 PIK3C2BO00750 1634 aa21.88■■□□□ 1.09
IRF3-224ENST00000599680 IQGAP1P46940 1657 aa21.86■■□□□ 1.09
IRF3-224ENST00000599680 KDM5AP29375 1690 aaKnown RBP21.84■■□□□ 1.09
IRF3-224ENST00000599680 SYNMO15061 1565 aa21.82■■□□□ 1.08
IRF3-224ENST00000599680 ZNF335Q9H4Z2 1342 aaPredicted RBP21.82■■□□□ 1.08
IRF3-224ENST00000599680 IQSEC2Q5JU85 1478 aa21.82■■□□□ 1.08
IRF3-224ENST00000599680 IQGAP3Q86VI3 1631 aa21.81■■□□□ 1.08
IRF3-224ENST00000599680 STAG3Q9UJ98 1225 aa21.81■■□□□ 1.08
IRF3-224ENST00000599680 NPHP4O75161 1426 aaPredicted RBP21.8■■□□□ 1.08
IRF3-224ENST00000599680 RRBP1Q9P2E9 1410 aaKnown RBP21.8■■□□□ 1.08
IRF3-224ENST00000599680 MED14O60244 1454 aa21.8■■□□□ 1.08
IRF3-224ENST00000599680 RPRD2Q5VT52 1461 aaKnown RBP21.8■■□□□ 1.08
IRF3-224ENST00000599680 E9PCH4 1651 aa21.79■■□□□ 1.08
IRF3-224ENST00000599680 MYO5BQ9ULV0 1848 aa21.78■■□□□ 1.08
IRF3-224ENST00000599680 SLIT1O75093 1534 aa21.76■■□□□ 1.07
IRF3-224ENST00000599680 NOS1P29475 1434 aa21.76■■□□□ 1.07
IRF3-224ENST00000599680 SCAF11Q99590 1463 aaKnown RBP21.76■■□□□ 1.07
IRF3-224ENST00000599680 ADGRB3O60242 1522 aa21.75■■□□□ 1.07
IRF3-224ENST00000599680 EID1Q9Y6B2 187 aa21.74■■□□□ 1.07
IRF3-224ENST00000599680 CPS1P31327 1500 aa21.74■■□□□ 1.07
IRF3-224ENST00000599680 ARHGAP23Q9P227 1491 aa21.73■■□□□ 1.07
IRF3-224ENST00000599680 NUP155O75694 1391 aa21.72■■□□□ 1.07
IRF3-224ENST00000599680 IDI1Q13907 227 aa21.71■■□□□ 1.07
IRF3-224ENST00000599680 TXNDC2Q86VQ3 553 aa21.71■■□□□ 1.07
IRF3-224ENST00000599680 SLC52A1Q9NWF4 448 aa21.71■■□□□ 1.07
IRF3-224ENST00000599680 TMEM2Q9UHN6 1383 aa21.69■■□□□ 1.06
IRF3-224ENST00000599680 STRCP1A6NGW2 1772 aa21.69■■□□□ 1.06
IRF3-224ENST00000599680 SPHKAPQ2M3C7 1700 aa21.68■■□□□ 1.06
IRF3-224ENST00000599680 LTKP29376 864 aa21.66■■□□□ 1.06
IRF3-224ENST00000599680 TMEM131LA2VDJ0 1609 aa21.66■■□□□ 1.06
IRF3-224ENST00000599680 UBAP1LF5GYI3 381 aa21.64■■□□□ 1.05
IRF3-224ENST00000599680 NAIPQ13075 1403 aa21.63■■□□□ 1.05
IRF3-224ENST00000599680 CHGAP10645 457 aaKnown RBP21.61■■□□□ 1.05
IRF3-224ENST00000599680 HFM1A2PYH4 1435 aa21.59■■□□□ 1.05
IRF3-224ENST00000599680 BCANQ96GW7 911 aa21.59■■□□□ 1.05
IRF3-224ENST00000599680 PPP1R15AO75807 674 aaPredicted RBP21.57■■□□□ 1.04
IRF3-224ENST00000599680 HDGFP51858 240 aaKnown RBP21.57■■□□□ 1.04
IRF3-224ENST00000599680 KIF1BO60333 1816 aa21.57■■□□□ 1.04
IRF3-224ENST00000599680 RIMS2Q9UQ26 1411 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms