RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 ABCA10Q8WWZ4 1543 aa14.1□□□□□ -0.15
LINC00343-206ENST00000598478 MAPKBP1O60336 1514 aa14.09□□□□□ -0.15
LINC00343-206ENST00000598478 ADGRL1O94910 1474 aa14.08□□□□□ -0.16
LINC00343-206ENST00000598478 ZSWIM6Q9HCJ5 1215 aa14.08□□□□□ -0.16
LINC00343-206ENST00000598478 ERBB3P21860 1342 aa14.08□□□□□ -0.16
LINC00343-206ENST00000598478 ADCY10Q96PN6 1610 aa14.04□□□□□ -0.16
LINC00343-206ENST00000598478 GPR153Q6NV75 609 aa14.03□□□□□ -0.16
LINC00343-206ENST00000598478 JPH4Q96JJ6 628 aa14.02□□□□□ -0.17
LINC00343-206ENST00000598478 FHAD1B1AJZ9 1412 aa14□□□□□ -0.17
LINC00343-206ENST00000598478 VARS2Q5ST30 1063 aaKnown RBP14□□□□□ -0.17
LINC00343-206ENST00000598478 FBXO41Q8TF61 875 aa14□□□□□ -0.17
LINC00343-206ENST00000598478 C2orf72A6NCS6 295 aa13.96□□□□□ -0.17
LINC00343-206ENST00000598478 KIF3CO14782 793 aa13.96□□□□□ -0.17
LINC00343-206ENST00000598478 ARSIQ5FYB1 569 aa13.96□□□□□ -0.17
LINC00343-206ENST00000598478 PPRC1Q5VV67 1664 aaKnown RBP13.94□□□□□ -0.18
LINC00343-206ENST00000598478 WRNQ14191 1432 aaPredicted RBP eCLIP13.92□□□□□ -0.18
LINC00343-206ENST00000598478 RUSC2Q8N2Y8 1516 aa13.92□□□□□ -0.18
LINC00343-206ENST00000598478 PPP1R37O75864 691 aa13.91□□□□□ -0.18
LINC00343-206ENST00000598478 ERICH3Q5RHP9 1530 aa13.9□□□□□ -0.18
LINC00343-206ENST00000598478 KHSRPQ92945 711 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC00343-206ENST00000598478 COL17A1Q9UMD9 1497 aaPredicted RBP13.9□□□□□ -0.18
LINC00343-206ENST00000598478 ZNF687Q8N1G0 1237 aa13.89□□□□□ -0.19
LINC00343-206ENST00000598478 HS6ST3Q8IZP7 471 aa13.88□□□□□ -0.19
LINC00343-206ENST00000598478 TMC2Q8TDI7 906 aa13.88□□□□□ -0.19
LINC00343-206ENST00000598478 ZNF316A6NFI3 1004 aaPredicted RBP13.85□□□□□ -0.19
LINC00343-206ENST00000598478 LMTK3Q96Q04 1460 aa13.85□□□□□ -0.19
LINC00343-206ENST00000598478 TTBK1Q5TCY1 1321 aaPredicted RBP13.85□□□□□ -0.19
LINC00343-206ENST00000598478 ASXL2Q76L83 1435 aa13.82□□□□□ -0.2
LINC00343-206ENST00000598478 GLI2P10070 1586 aa13.82□□□□□ -0.2
LINC00343-206ENST00000598478 SLC34A2O95436 690 aa13.81□□□□□ -0.2
LINC00343-206ENST00000598478 CHGAP10645 457 aaKnown RBP13.81□□□□□ -0.2
LINC00343-206ENST00000598478 BIVM-ERCC5R4GMW8 1640 aa13.81□□□□□ -0.2
LINC00343-206ENST00000598478 TOP2BQ02880 1626 aa13.8□□□□□ -0.2
LINC00343-206ENST00000598478 NUDT7P0C024 238 aa13.8□□□□□ -0.2
LINC00343-206ENST00000598478 PCDHGA4Q9Y5G9 962 aa13.79□□□□□ -0.2
LINC00343-206ENST00000598478 ABCC2Q92887 1545 aa13.78□□□□□ -0.2
LINC00343-206ENST00000598478 CUL7Q14999 1698 aa13.78□□□□□ -0.2
LINC00343-206ENST00000598478 PTPRGP23470 1445 aa13.77□□□□□ -0.21
LINC00343-206ENST00000598478 PLB1Q6P1J6 1458 aa13.77□□□□□ -0.21
LINC00343-206ENST00000598478 ILDR2Q71H61 639 aa13.76□□□□□ -0.21
LINC00343-206ENST00000598478 MAP3K4Q9Y6R4 1608 aa13.75□□□□□ -0.21
LINC00343-206ENST00000598478 KIAA0586Q9BVV6 1533 aa13.75□□□□□ -0.21
LINC00343-206ENST00000598478 RNF166Q96A37 237 aaPredicted RBP13.73□□□□□ -0.21
LINC00343-206ENST00000598478 LHX6Q9UPM6 363 aa13.73□□□□□ -0.21
LINC00343-206ENST00000598478 EPRSP07814 1512 aaKnown RBP13.72□□□□□ -0.21
LINC00343-206ENST00000598478 TEX14Q8IWB6 1497 aa13.72□□□□□ -0.21
LINC00343-206ENST00000598478 SOCS7O14512 581 aa13.71□□□□□ -0.21
LINC00343-206ENST00000598478 MYT1LQ9UL68 1186 aa13.71□□□□□ -0.21
LINC00343-206ENST00000598478 NKX1-1Q15270 411 aaPredicted RBP13.7□□□□□ -0.22
LINC00343-206ENST00000598478 ANKRD13DQ6ZTN6 518 aa13.7□□□□□ -0.22
LINC00343-206ENST00000598478 KIF21BO75037 1637 aa13.69□□□□□ -0.22
LINC00343-206ENST00000598478 LSM11P83369 360 aaKnown RBP eCLIP13.68□□□□□ -0.22
LINC00343-206ENST00000598478 FOXK1P85037 733 aa13.68□□□□□ -0.22
LINC00343-206ENST00000598478 GPHNQ9NQX3 736 aaPredicted RBP13.68□□□□□ -0.22
LINC00343-206ENST00000598478 TNIKQ9UKE5 1360 aa13.68□□□□□ -0.22
LINC00343-206ENST00000598478 PLPP6Q8IY26 295 aa13.67□□□□□ -0.22
LINC00343-206ENST00000598478 PBX2P40425 430 aa13.66□□□□□ -0.22
LINC00343-206ENST00000598478 PTGER2P43116 358 aa13.66□□□□□ -0.22
LINC00343-206ENST00000598478 DISP3Q9P2K9 1392 aa13.66□□□□□ -0.22
LINC00343-206ENST00000598478 UHRF1BP1LA0JNW5 1464 aa13.66□□□□□ -0.22
LINC00343-206ENST00000598478 PTCD2Q8WV60 388 aaKnown RBP13.65□□□□□ -0.22
LINC00343-206ENST00000598478 DSG2Q14126 1118 aa13.64□□□□□ -0.23
LINC00343-206ENST00000598478 UACAQ9BZF9 1416 aa13.64□□□□□ -0.23
LINC00343-206ENST00000598478 RYDENQ9NUL5 291 aaKnown RBP13.63□□□□□ -0.23
LINC00343-206ENST00000598478 ZCCHC11Q5TAX3 1644 aaKnown RBP13.63□□□□□ -0.23
LINC00343-206ENST00000598478 CARMIL2Q6F5E8 1435 aa13.63□□□□□ -0.23
LINC00343-206ENST00000598478 PTPRMP28827 1452 aa13.62□□□□□ -0.23
LINC00343-206ENST00000598478 POTEEQ6S8J3 1075 aa13.62□□□□□ -0.23
LINC00343-206ENST00000598478 KDM5BQ9UGL1 1544 aa13.62□□□□□ -0.23
LINC00343-206ENST00000598478 IGF1RP08069 1367 aa13.61□□□□□ -0.23
LINC00343-206ENST00000598478 AXIN2Q9Y2T1 843 aa13.61□□□□□ -0.23
LINC00343-206ENST00000598478 PCF11O94913 1555 aaKnown RBP13.59□□□□□ -0.23
LINC00343-206ENST00000598478 PSDA5PKW4 1024 aaPredicted RBP13.59□□□□□ -0.23
LINC00343-206ENST00000598478 ADAMTSL3P82987 1691 aa13.58□□□□□ -0.24
LINC00343-206ENST00000598478 CERKQ8TCT0 537 aa13.56□□□□□ -0.24
LINC00343-206ENST00000598478 CD109Q6YHK3 1445 aa13.56□□□□□ -0.24
LINC00343-206ENST00000598478 WDR7Q9Y4E6 1490 aa13.55□□□□□ -0.24
LINC00343-206ENST00000598478 DISP1Q96F81 1524 aa13.55□□□□□ -0.24
LINC00343-206ENST00000598478 TBC1D12O60347 775 aa13.55□□□□□ -0.24
LINC00343-206ENST00000598478 MAGI3Q5TCQ9 1506 aa13.54□□□□□ -0.24
LINC00343-206ENST00000598478 IQGAP2Q13576 1575 aa13.54□□□□□ -0.24
LINC00343-206ENST00000598478 HSPA2P54652 639 aa13.54□□□□□ -0.24
LINC00343-206ENST00000598478 KCNH8Q96L42 1107 aa13.54□□□□□ -0.24
LINC00343-206ENST00000598478 ARHGAP33O14559 1287 aa13.53□□□□□ -0.24
LINC00343-206ENST00000598478 CRISPLD2Q9H0B8 497 aa13.53□□□□□ -0.24
LINC00343-206ENST00000598478 CFAP43Q8NDM7 1665 aa13.53□□□□□ -0.24
LINC00343-206ENST00000598478 MADDQ8WXG6 1647 aa13.51□□□□□ -0.25
LINC00343-206ENST00000598478 KIF27Q86VH2 1401 aa13.49□□□□□ -0.25
LINC00343-206ENST00000598478 SUPT5HO00267 1087 aaKnown RBP13.49□□□□□ -0.25
LINC00343-206ENST00000598478 OXER1Q8TDS5 423 aa13.49□□□□□ -0.25
LINC00343-206ENST00000598478 SPATA31D1Q6ZQQ2 1576 aa13.49□□□□□ -0.25
LINC00343-206ENST00000598478 CARMIL1Q5VZK9 1371 aa13.48□□□□□ -0.25
LINC00343-206ENST00000598478 BCORL1Q5H9F3 1711 aa13.48□□□□□ -0.25
LINC00343-206ENST00000598478 GTPBP6O43824 516 aaPredicted RBP13.48□□□□□ -0.25
LINC00343-206ENST00000598478 PPP4R3BQ5MIZ7 849 aa13.48□□□□□ -0.25
LINC00343-206ENST00000598478 PPP1R15BQ5SWA1 713 aa13.48□□□□□ -0.25
LINC00343-206ENST00000598478 UPF1Q92900 1129 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC00343-206ENST00000598478 ADGRD1Q6QNK2 874 aa13.47□□□□□ -0.25
LINC00343-206ENST00000598478 ARAP3Q8WWN8 1544 aa13.47□□□□□ -0.25
LINC00343-206ENST00000598478 NCKAP5LQ9HCH0 1330 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms