RNA–Protein interactions for RNA: ENST00000598329.2

SYMPK-210, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 1,000 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-210ENST00000598329 PTPRKQ15262 1439 aa19.28■□□□□ 0.68
SYMPK-210ENST00000598329 PPARGC1BQ86YN6 1023 aaKnown RBP19.28■□□□□ 0.68
SYMPK-210ENST00000598329 LMTK3Q96Q04 1460 aa19.28■□□□□ 0.68
SYMPK-210ENST00000598329 NPATQ14207 1427 aa19.27■□□□□ 0.68
SYMPK-210ENST00000598329 SETD1BQ9UPS6 1966 aaKnown RBP19.27■□□□□ 0.68
SYMPK-210ENST00000598329 RNF17Q9BXT8 1623 aaKnown RBP19.27■□□□□ 0.68
SYMPK-210ENST00000598329 RRP7BPQ9NSQ0 103 aa19.27■□□□□ 0.68
SYMPK-210ENST00000598329 ROCK1Q13464 1354 aa19.26■□□□□ 0.67
SYMPK-210ENST00000598329 C3P01024 1663 aa19.25■□□□□ 0.67
SYMPK-210ENST00000598329 KDM5DQ9BY66 1539 aa19.25■□□□□ 0.67
SYMPK-210ENST00000598329 CHIC2Q9UKJ5 165 aa19.24■□□□□ 0.67
SYMPK-210ENST00000598329 MROH1Q8NDA8 1641 aa19.22■□□□□ 0.67
SYMPK-210ENST00000598329 WASHC2CQ9Y4E1 1318 aa19.22■□□□□ 0.67
SYMPK-210ENST00000598329 CLTCQ00610 1675 aaKnown RBP19.2■□□□□ 0.66
SYMPK-210ENST00000598329 PRDM15P57071 1507 aaPredicted RBP19.19■□□□□ 0.66
SYMPK-210ENST00000598329 PZPP20742 1482 aa19.18■□□□□ 0.66
SYMPK-210ENST00000598329 ABCC3O15438 1527 aa19.18■□□□□ 0.66
SYMPK-210ENST00000598329 ANKRD50Q9ULJ7 1429 aa19.17■□□□□ 0.66
SYMPK-210ENST00000598329 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
SYMPK-210ENST00000598329 DEPDC5O75140 1603 aa19.17■□□□□ 0.66
SYMPK-210ENST00000598329 PREX1Q8TCU6 1659 aa19.17■□□□□ 0.66
SYMPK-210ENST00000598329 UHRF1BP1Q6BDS2 1440 aa19.17■□□□□ 0.66
SYMPK-210ENST00000598329 ARHGAP31Q2M1Z3 1444 aa19.16■□□□□ 0.66
SYMPK-210ENST00000598329 VWDEQ8N2E2 1590 aa19.15■□□□□ 0.66
SYMPK-210ENST00000598329 ZC3H13Q5T200 1668 aaKnown RBP19.14■□□□□ 0.66
SYMPK-210ENST00000598329 LMTK2Q8IWU2 1503 aa19.14■□□□□ 0.65
SYMPK-210ENST00000598329 FBXO31Q5XUX0 539 aaPredicted RBP19.12■□□□□ 0.65
SYMPK-210ENST00000598329 HSPA2P54652 639 aa19.11■□□□□ 0.65
SYMPK-210ENST00000598329 KANK1Q14678 1352 aa19.09■□□□□ 0.65
SYMPK-210ENST00000598329 TNRQ92752 1358 aa19.08■□□□□ 0.65
SYMPK-210ENST00000598329 SPATA31D1Q6ZQQ2 1576 aa19.07■□□□□ 0.64
SYMPK-210ENST00000598329 ITGAEP38570 1179 aa19.06■□□□□ 0.64
SYMPK-210ENST00000598329 A2ML1A8K2U0 1454 aa19.05■□□□□ 0.64
SYMPK-210ENST00000598329 ERVK-7P63135 1459 aa19.05■□□□□ 0.64
SYMPK-210ENST00000598329 NLRP1Q9C000 1473 aa19.05■□□□□ 0.64
SYMPK-210ENST00000598329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.05■□□□□ 0.64
SYMPK-210ENST00000598329 ZNF142P52746 1687 aaPredicted RBP19.05■□□□□ 0.64
SYMPK-210ENST00000598329 CAMSAP1Q5T5Y3 1602 aa19.04■□□□□ 0.64
SYMPK-210ENST00000598329 NAIPQ13075 1403 aa19.04■□□□□ 0.64
SYMPK-210ENST00000598329 MYO3AQ8NEV4 1616 aa19.03■□□□□ 0.64
SYMPK-210ENST00000598329 UNC13BO14795 1591 aa19.03■□□□□ 0.64
SYMPK-210ENST00000598329 CEP170BQ9Y4F5 1589 aaPredicted RBP19.03■□□□□ 0.64
SYMPK-210ENST00000598329 HFM1A2PYH4 1435 aa19.03■□□□□ 0.64
SYMPK-210ENST00000598329 CEP152O94986 1710 aa19.03■□□□□ 0.64
SYMPK-210ENST00000598329 PLA2R1Q13018 1463 aa19.02■□□□□ 0.63
SYMPK-210ENST00000598329 RPRD2Q5VT52 1461 aaKnown RBP19.01■□□□□ 0.63
SYMPK-210ENST00000598329 DMRT2Q9Y5R5 561 aa19■□□□□ 0.63
SYMPK-210ENST00000598329 EFCAB6Q5THR3 1501 aa19■□□□□ 0.63
SYMPK-210ENST00000598329 NOS1P29475 1434 aa19■□□□□ 0.63
SYMPK-210ENST00000598329 STRCQ7RTU9 1775 aa18.98■□□□□ 0.63
SYMPK-210ENST00000598329 PTPRTO14522 1441 aa18.98■□□□□ 0.63
SYMPK-210ENST00000598329 PKD2Q13563 968 aa18.96■□□□□ 0.63
SYMPK-210ENST00000598329 THEMISQ8N1K5 641 aaPredicted RBP18.96■□□□□ 0.63
SYMPK-210ENST00000598329 IQGAP3Q86VI3 1631 aa18.96■□□□□ 0.63
SYMPK-210ENST00000598329 NUP155O75694 1391 aa18.95■□□□□ 0.62
SYMPK-210ENST00000598329 TET3O43151 1660 aa18.95■□□□□ 0.62
SYMPK-210ENST00000598329 SLC52A1Q9NWF4 448 aa18.93■□□□□ 0.62
SYMPK-210ENST00000598329 UGGT1Q9NYU2 1555 aa18.93■□□□□ 0.62
SYMPK-210ENST00000598329 GCC2Q8IWJ2 1684 aa18.92■□□□□ 0.62
SYMPK-210ENST00000598329 IDI1Q13907 227 aa18.91■□□□□ 0.62
SYMPK-210ENST00000598329 SYNMO15061 1565 aa18.89■□□□□ 0.62
SYMPK-210ENST00000598329 NCKAP5LQ9HCH0 1330 aa18.89■□□□□ 0.61
SYMPK-210ENST00000598329 ACIN1Q9UKV3 1341 aaKnown RBP18.88■□□□□ 0.61
SYMPK-210ENST00000598329 MED14O60244 1454 aa18.87■□□□□ 0.61
SYMPK-210ENST00000598329 KDM5AP29375 1690 aaKnown RBP18.87■□□□□ 0.61
SYMPK-210ENST00000598329 CFAP65Q6ZU64 1925 aaKnown RBP18.87■□□□□ 0.61
SYMPK-210ENST00000598329 ANKLE2Q86XL3 938 aa18.87■□□□□ 0.61
SYMPK-210ENST00000598329 ARHGAP23Q9P227 1491 aa18.87■□□□□ 0.61
SYMPK-210ENST00000598329 E9PCH4 1651 aa18.85■□□□□ 0.61
SYMPK-210ENST00000598329 SLIT1O75093 1534 aa18.85■□□□□ 0.61
SYMPK-210ENST00000598329 UBR1Q8IWV7 1749 aa18.85■□□□□ 0.61
SYMPK-210ENST00000598329 NEURL4Q96JN8 1562 aa18.83■□□□□ 0.6
SYMPK-210ENST00000598329 PIK3C2BO00750 1634 aa18.82■□□□□ 0.6
SYMPK-210ENST00000598329 TMEM2Q9UHN6 1383 aa18.81■□□□□ 0.6
SYMPK-210ENST00000598329 SETD5Q9C0A6 1442 aa18.81■□□□□ 0.6
SYMPK-210ENST00000598329 HRCP23327 699 aa18.8■□□□□ 0.6
SYMPK-210ENST00000598329 LTKP29376 864 aa18.79■□□□□ 0.6
SYMPK-210ENST00000598329 ADGRB3O60242 1522 aa18.79■□□□□ 0.6
SYMPK-210ENST00000598329 SCAF11Q99590 1463 aaKnown RBP18.77■□□□□ 0.6
SYMPK-210ENST00000598329 NPHP4O75161 1426 aaPredicted RBP18.77■□□□□ 0.6
SYMPK-210ENST00000598329 TRIM52Q96A61 297 aa18.77■□□□□ 0.6
SYMPK-210ENST00000598329 LTBP4Q8N2S1 1624 aa18.77■□□□□ 0.6
SYMPK-210ENST00000598329 POLR1AO95602 1720 aaPredicted RBP18.77■□□□□ 0.59
SYMPK-210ENST00000598329 SLC4A1APQ9BWU0 796 aaKnown RBP18.76■□□□□ 0.59
SYMPK-210ENST00000598329 TMEM131LA2VDJ0 1609 aa18.75■□□□□ 0.59
SYMPK-210ENST00000598329 TXNDC2Q86VQ3 553 aa18.75■□□□□ 0.59
SYMPK-210ENST00000598329 STAG3Q9UJ98 1225 aa18.75■□□□□ 0.59
SYMPK-210ENST00000598329 EID1Q9Y6B2 187 aa18.75■□□□□ 0.59
SYMPK-210ENST00000598329 ZFYVE9O95405 1425 aa18.74■□□□□ 0.59
SYMPK-210ENST00000598329 ILDR1Q86SU0 546 aaPredicted RBP18.74■□□□□ 0.59
SYMPK-210ENST00000598329 CERKQ8TCT0 537 aa18.74■□□□□ 0.59
SYMPK-210ENST00000598329 RAB3GAP2Q9H2M9 1393 aa18.72■□□□□ 0.59
SYMPK-210ENST00000598329 MPHOSPH9Q99550 1183 aa18.72■□□□□ 0.59
SYMPK-210ENST00000598329 TRPM2O94759 1503 aa18.72■□□□□ 0.59
SYMPK-210ENST00000598329 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.59
SYMPK-210ENST00000598329 ZNF335Q9H4Z2 1342 aaPredicted RBP18.71■□□□□ 0.59
SYMPK-210ENST00000598329 HDGFP51858 240 aaKnown RBP18.7■□□□□ 0.58
SYMPK-210ENST00000598329 IQGAP1P46940 1657 aa18.69■□□□□ 0.58
SYMPK-210ENST00000598329 IQSEC2Q5JU85 1478 aa18.69■□□□□ 0.58
SYMPK-210ENST00000598329 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms