RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 KDM5DQ9BY66 1539 aa27.01■■□□□ 1.91
PNKP-210ENST00000597965 ARHGEF5Q12774 1597 aa27■■□□□ 1.91
PNKP-210ENST00000597965 WASHC2CQ9Y4E1 1318 aa26.99■■□□□ 1.91
PNKP-210ENST00000597965 DISP3Q9P2K9 1392 aa26.98■■□□□ 1.91
PNKP-210ENST00000597965 PZPP20742 1482 aa26.97■■□□□ 1.91
PNKP-210ENST00000597965 VPS8Q8N3P4 1428 aa26.97■■□□□ 1.91
PNKP-210ENST00000597965 TNRQ92752 1358 aa26.97■■□□□ 1.91
PNKP-210ENST00000597965 ZNF335Q9H4Z2 1342 aaPredicted RBP26.96■■□□□ 1.91
PNKP-210ENST00000597965 DNMT1P26358 1616 aaKnown RBP26.96■■□□□ 1.91
PNKP-210ENST00000597965 LRRC9Q6ZRR7 1453 aa26.94■■□□□ 1.9
PNKP-210ENST00000597965 MAP3K1Q13233 1512 aa26.9■■□□□ 1.9
PNKP-210ENST00000597965 NLRP1Q9C000 1473 aa26.89■■□□□ 1.9
PNKP-210ENST00000597965 UBAP1LF5GYI3 381 aa26.89■■□□□ 1.9
PNKP-210ENST00000597965 FBXO31Q5XUX0 539 aaPredicted RBP26.89■■□□□ 1.9
PNKP-210ENST00000597965 THEMISQ8N1K5 641 aaPredicted RBP26.89■■□□□ 1.9
PNKP-210ENST00000597965 POLR1AO95602 1720 aaPredicted RBP26.88■■□□□ 1.89
PNKP-210ENST00000597965 MIA2Q96PC5 1412 aa26.87■■□□□ 1.89
PNKP-210ENST00000597965 MAST1Q9Y2H9 1570 aa26.87■■□□□ 1.89
PNKP-210ENST00000597965 ANKLE2Q86XL3 938 aa26.86■■□□□ 1.89
PNKP-210ENST00000597965 ZC3H13Q5T200 1668 aaKnown RBP26.84■■□□□ 1.89
PNKP-210ENST00000597965 SPATA31D1Q6ZQQ2 1576 aa26.84■■□□□ 1.89
PNKP-210ENST00000597965 RNF17Q9BXT8 1623 aaKnown RBP26.83■■□□□ 1.88
PNKP-210ENST00000597965 EIF2AK4Q9P2K8 1649 aaKnown RBP26.83■■□□□ 1.88
PNKP-210ENST00000597965 CPS1P31327 1500 aa26.82■■□□□ 1.88
PNKP-210ENST00000597965 UGGT1Q9NYU2 1555 aa26.82■■□□□ 1.88
PNKP-210ENST00000597965 MYOM3Q5VTT5 1437 aa26.82■■□□□ 1.88
PNKP-210ENST00000597965 LOC105371045A0A1W2PR82 267 aa26.79■■□□□ 1.88
PNKP-210ENST00000597965 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.79■■□□□ 1.88
PNKP-210ENST00000597965 NEURL4Q96JN8 1562 aa26.78■■□□□ 1.88
PNKP-210ENST00000597965 DEPDC5O75140 1603 aa26.76■■□□□ 1.87
PNKP-210ENST00000597965 ABCC3O15438 1527 aa26.76■■□□□ 1.87
PNKP-210ENST00000597965 SHANK2Q9UPX8 1470 aa26.76■■□□□ 1.87
PNKP-210ENST00000597965 TOM1O60784 492 aa26.76■■□□□ 1.87
PNKP-210ENST00000597965 APLP2Q06481 763 aa26.76■■□□□ 1.87
PNKP-210ENST00000597965 KANK4Q5T7N3 995 aaPredicted RBP26.76■■□□□ 1.87
PNKP-210ENST00000597965 MED14O60244 1454 aa26.74■■□□□ 1.87
PNKP-210ENST00000597965 SOCS7O14512 581 aa26.74■■□□□ 1.87
PNKP-210ENST00000597965 ILDR2Q71H61 639 aa26.74■■□□□ 1.87
PNKP-210ENST00000597965 DUOX2Q9NRD8 1548 aa26.74■■□□□ 1.87
PNKP-210ENST00000597965 NPHP4O75161 1426 aaPredicted RBP26.72■■□□□ 1.87
PNKP-210ENST00000597965 ERVK-7P63135 1459 aa26.68■■□□□ 1.86
PNKP-210ENST00000597965 IQGAP1P46940 1657 aa26.66■■□□□ 1.86
PNKP-210ENST00000597965 SCAF1Q9H7N4 1312 aaKnown RBP26.66■■□□□ 1.86
PNKP-210ENST00000597965 ERBINQ96RT1 1412 aa26.65■■□□□ 1.86
PNKP-210ENST00000597965 KIF15Q9NS87 1388 aa26.65■■□□□ 1.86
PNKP-210ENST00000597965 VWDEQ8N2E2 1590 aa26.65■■□□□ 1.86
PNKP-210ENST00000597965 MROH1Q8NDA8 1641 aa26.65■■□□□ 1.86
PNKP-210ENST00000597965 CEP152O94986 1710 aa26.62■■□□□ 1.85
PNKP-210ENST00000597965 PIP4K2BP78356 416 aa26.62■■□□□ 1.85
PNKP-210ENST00000597965 ARHGAP31Q2M1Z3 1444 aa26.62■■□□□ 1.85
PNKP-210ENST00000597965 PRDM15P57071 1507 aaPredicted RBP26.61■■□□□ 1.85
PNKP-210ENST00000597965 CROCC2H7BZ55 1655 aa26.61■■□□□ 1.85
PNKP-210ENST00000597965 PTPN23Q9H3S7 1636 aa26.61■■□□□ 1.85
PNKP-210ENST00000597965 KANK1Q14678 1352 aa26.59■■□□□ 1.85
PNKP-210ENST00000597965 CFAP65Q6ZU64 1925 aaKnown RBP26.59■■□□□ 1.85
PNKP-210ENST00000597965 ABCC5O15440 1437 aa26.58■■□□□ 1.85
PNKP-210ENST00000597965 RRP7BPQ9NSQ0 103 aa26.58■■□□□ 1.85
PNKP-210ENST00000597965 UBR1Q8IWV7 1749 aa26.58■■□□□ 1.85
PNKP-210ENST00000597965 HSPA1LP34931 641 aa26.56■■□□□ 1.84
PNKP-210ENST00000597965 DAPK1P53355 1430 aa26.56■■□□□ 1.84
PNKP-210ENST00000597965 SCAF11Q99590 1463 aaKnown RBP26.55■■□□□ 1.84
PNKP-210ENST00000597965 SYNMO15061 1565 aa26.55■■□□□ 1.84
PNKP-210ENST00000597965 EID1Q9Y6B2 187 aa26.55■■□□□ 1.84
PNKP-210ENST00000597965 ANKRD30AQ9BXX3 1397 aa26.53■■□□□ 1.84
PNKP-210ENST00000597965 FGD6Q6ZV73 1430 aa26.53■■□□□ 1.84
PNKP-210ENST00000597965 SLIT1O75093 1534 aa26.52■■□□□ 1.84
PNKP-210ENST00000597965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.52■■□□□ 1.84
PNKP-210ENST00000597965 TXNDC2Q86VQ3 553 aa26.51■■□□□ 1.83
PNKP-210ENST00000597965 ARHGAP23Q9P227 1491 aa26.5■■□□□ 1.83
PNKP-210ENST00000597965 STAG3Q9UJ98 1225 aa26.5■■□□□ 1.83
PNKP-210ENST00000597965 LRRC7Q96NW7 1537 aa26.49■■□□□ 1.83
PNKP-210ENST00000597965 KDM5AP29375 1690 aaKnown RBP26.46■■□□□ 1.83
PNKP-210ENST00000597965 LMTK2Q8IWU2 1503 aa26.45■■□□□ 1.83
PNKP-210ENST00000597965 STRCP1A6NGW2 1772 aa26.45■■□□□ 1.82
PNKP-210ENST00000597965 LTKP29376 864 aa26.44■■□□□ 1.82
PNKP-210ENST00000597965 MED1Q15648 1581 aaPredicted RBP26.44■■□□□ 1.82
PNKP-210ENST00000597965 TMEM2Q9UHN6 1383 aa26.43■■□□□ 1.82
PNKP-210ENST00000597965 CHIC2Q9UKJ5 165 aa26.42■■□□□ 1.82
PNKP-210ENST00000597965 PIK3C2BO00750 1634 aa26.42■■□□□ 1.82
PNKP-210ENST00000597965 EFCAB6Q5THR3 1501 aa26.4■■□□□ 1.82
PNKP-210ENST00000597965 ALKQ9UM73 1620 aa26.4■■□□□ 1.82
PNKP-210ENST00000597965 ADGRL2O95490 1459 aa26.37■■□□□ 1.81
PNKP-210ENST00000597965 PHF23Q9BUL5 403 aaPredicted RBP26.37■■□□□ 1.81
PNKP-210ENST00000597965 SLC52A1Q9NWF4 448 aa26.37■■□□□ 1.81
PNKP-210ENST00000597965 IDI1Q13907 227 aa26.36■■□□□ 1.81
PNKP-210ENST00000597965 FAM50AQ14320 339 aaKnown RBP26.33■■□□□ 1.81
PNKP-210ENST00000597965 RPRD2Q5VT52 1461 aaKnown RBP26.33■■□□□ 1.81
PNKP-210ENST00000597965 NOS1P29475 1434 aa26.32■■□□□ 1.8
PNKP-210ENST00000597965 ANKRD50Q9ULJ7 1429 aa26.31■■□□□ 1.8
PNKP-210ENST00000597965 ADGRB3O60242 1522 aa26.29■■□□□ 1.8
PNKP-210ENST00000597965 KCNA6P17658 529 aa26.29■■□□□ 1.8
PNKP-210ENST00000597965 HDGFP51858 240 aaKnown RBP26.29■■□□□ 1.8
PNKP-210ENST00000597965 XIRP1Q702N8 1843 aaKnown RBP26.25■■□□□ 1.79
PNKP-210ENST00000597965 TET3O43151 1660 aa26.25■■□□□ 1.79
PNKP-210ENST00000597965 BCANQ96GW7 911 aa26.24■■□□□ 1.79
PNKP-210ENST00000597965 SENP3Q9H4L4 574 aaPredicted RBP26.24■■□□□ 1.79
PNKP-210ENST00000597965 FAM135BQ49AJ0 1406 aa26.23■■□□□ 1.79
PNKP-210ENST00000597965 TMEM94Q12767 1356 aa26.23■■□□□ 1.79
PNKP-210ENST00000597965 SLC26A8Q96RN1 970 aa26.23■■□□□ 1.79
PNKP-210ENST00000597965 PROSER2Q86WR7 435 aaPredicted RBP26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms