RNA–Protein interactions for RNA: ENST00000597646.5

COPE-207, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 868 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-207ENST00000597646 KDM5DQ9BY66 1539 aa31.05■■■□□ 2.56
COPE-207ENST00000597646 FBXO31Q5XUX0 539 aaPredicted RBP31.04■■■□□ 2.56
COPE-207ENST00000597646 NCOA1Q15788 1441 aa31.03■■■□□ 2.56
COPE-207ENST00000597646 PTPRTO14522 1441 aa31.01■■■□□ 2.55
COPE-207ENST00000597646 NCKAP5LQ9HCH0 1330 aa31■■■□□ 2.55
COPE-207ENST00000597646 CEP170BQ9Y4F5 1589 aaPredicted RBP31■■■□□ 2.55
COPE-207ENST00000597646 FGD6Q6ZV73 1430 aa30.98■■■□□ 2.55
COPE-207ENST00000597646 FAM135AQ9P2D6 1515 aa30.98■■■□□ 2.55
COPE-207ENST00000597646 ZNF142P52746 1687 aaPredicted RBP30.98■■■□□ 2.55
COPE-207ENST00000597646 RRP7BPQ9NSQ0 103 aa30.98■■■□□ 2.55
COPE-207ENST00000597646 TNRQ92752 1358 aa30.97■■■□□ 2.55
COPE-207ENST00000597646 ABCC5O15440 1437 aa30.97■■■□□ 2.55
COPE-207ENST00000597646 PZPP20742 1482 aa30.95■■■□□ 2.55
COPE-207ENST00000597646 DUOX2Q9NRD8 1548 aa30.94■■■□□ 2.54
COPE-207ENST00000597646 CHIC2Q9UKJ5 165 aa30.94■■■□□ 2.54
COPE-207ENST00000597646 CROCC2H7BZ55 1655 aa30.93■■■□□ 2.54
COPE-207ENST00000597646 KIF15Q9NS87 1388 aa30.93■■■□□ 2.54
COPE-207ENST00000597646 DAPK1P53355 1430 aa30.93■■■□□ 2.54
COPE-207ENST00000597646 EIF2AK4Q9P2K8 1649 aaKnown RBP30.93■■■□□ 2.54
COPE-207ENST00000597646 RNF17Q9BXT8 1623 aaKnown RBP30.92■■■□□ 2.54
COPE-207ENST00000597646 PKD2Q13563 968 aa30.92■■■□□ 2.54
COPE-207ENST00000597646 A2ML1A8K2U0 1454 aa30.92■■■□□ 2.54
COPE-207ENST00000597646 SHANK2Q9UPX8 1470 aa30.91■■■□□ 2.54
COPE-207ENST00000597646 FAM50AQ14320 339 aaKnown RBP30.91■■■□□ 2.54
COPE-207ENST00000597646 TCOF1Q13428 1488 aaKnown RBP30.9■■■□□ 2.54
COPE-207ENST00000597646 DNMT1P26358 1616 aaKnown RBP30.9■■■□□ 2.54
COPE-207ENST00000597646 PLA2R1Q13018 1463 aa30.88■■■□□ 2.53
COPE-207ENST00000597646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.87■■■□□ 2.534e-6■■■□□ 15.1
COPE-207ENST00000597646 ABCC3O15438 1527 aa30.87■■■□□ 2.53
COPE-207ENST00000597646 ZC3H13Q5T200 1668 aaKnown RBP30.86■■■□□ 2.53
COPE-207ENST00000597646 ANKRD30AQ9BXX3 1397 aa30.84■■■□□ 2.53
COPE-207ENST00000597646 CEP152O94986 1710 aa30.83■■■□□ 2.53
COPE-207ENST00000597646 ERBINQ96RT1 1412 aa30.82■■■□□ 2.52
COPE-207ENST00000597646 CFAP65Q6ZU64 1925 aaKnown RBP30.81■■■□□ 2.52
COPE-207ENST00000597646 MROH1Q8NDA8 1641 aa30.81■■■□□ 2.52
COPE-207ENST00000597646 THEMISQ8N1K5 641 aaPredicted RBP30.8■■■□□ 2.52
COPE-207ENST00000597646 NLRP1Q9C000 1473 aa30.78■■■□□ 2.52
COPE-207ENST00000597646 ZNF335Q9H4Z2 1342 aaPredicted RBP30.77■■■□□ 2.52
COPE-207ENST00000597646 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.77■■■□□ 2.527e-11■■□□□ 12.1
COPE-207ENST00000597646 UGGT1Q9NYU2 1555 aa30.76■■■□□ 2.52
COPE-207ENST00000597646 KANK1Q14678 1352 aa30.76■■■□□ 2.51
COPE-207ENST00000597646 LTBP4Q8N2S1 1624 aa30.76■■■□□ 2.51
COPE-207ENST00000597646 ANKLE2Q86XL3 938 aa30.75■■■□□ 2.51
COPE-207ENST00000597646 PPARGC1BQ86YN6 1023 aaKnown RBP30.74■■■□□ 2.51
COPE-207ENST00000597646 ERVK-7P63135 1459 aa30.73■■■□□ 2.51
COPE-207ENST00000597646 SPATA31D1Q6ZQQ2 1576 aa30.72■■■□□ 2.51
COPE-207ENST00000597646 PRDM15P57071 1507 aaPredicted RBP30.72■■■□□ 2.51
COPE-207ENST00000597646 POLR1AO95602 1720 aaPredicted RBP30.71■■■□□ 2.51
COPE-207ENST00000597646 DEPDC5O75140 1603 aa30.65■■■□□ 2.5
COPE-207ENST00000597646 ADGRL2O95490 1459 aa30.64■■■□□ 2.5
COPE-207ENST00000597646 ARHGAP31Q2M1Z3 1444 aa30.63■■■□□ 2.49
COPE-207ENST00000597646 NEURL4Q96JN8 1562 aa30.62■■■□□ 2.49
COPE-207ENST00000597646 IQSEC2Q5JU85 1478 aa30.61■■■□□ 2.49
COPE-207ENST00000597646 ITGAEP38570 1179 aa30.6■■■□□ 2.49
COPE-207ENST00000597646 NPHP4O75161 1426 aaPredicted RBP30.59■■■□□ 2.49
COPE-207ENST00000597646 STAG3Q9UJ98 1225 aa30.59■■■□□ 2.49
COPE-207ENST00000597646 ANKRD50Q9ULJ7 1429 aa30.58■■■□□ 2.49
COPE-207ENST00000597646 UBAP1LF5GYI3 381 aa30.55■■■□□ 2.48
COPE-207ENST00000597646 UBR1Q8IWV7 1749 aa30.55■■■□□ 2.48
COPE-207ENST00000597646 LMTK2Q8IWU2 1503 aa30.52■■■□□ 2.48
COPE-207ENST00000597646 MED14O60244 1454 aa30.52■■■□□ 2.48
COPE-207ENST00000597646 VWDEQ8N2E2 1590 aa30.52■■■□□ 2.48
COPE-207ENST00000597646 IQGAP1P46940 1657 aa30.51■■■□□ 2.47
COPE-207ENST00000597646 TXNDC2Q86VQ3 553 aa30.5■■■□□ 2.47
COPE-207ENST00000597646 EID1Q9Y6B2 187 aa30.49■■■□□ 2.47
COPE-207ENST00000597646 PIK3C2BO00750 1634 aa30.47■■■□□ 2.47
COPE-207ENST00000597646 IDI1Q13907 227 aa30.47■■■□□ 2.47
COPE-207ENST00000597646 CPS1P31327 1500 aa30.46■■■□□ 2.47
COPE-207ENST00000597646 EFCAB6Q5THR3 1501 aa30.46■■■□□ 2.47
COPE-207ENST00000597646 LTKP29376 864 aa30.45■■■□□ 2.47
COPE-207ENST00000597646 SCAF11Q99590 1463 aaKnown RBP30.44■■■□□ 2.46
COPE-207ENST00000597646 ROCK1Q13464 1354 aa30.43■■■□□ 2.46
COPE-207ENST00000597646 SCAF1Q9H7N4 1312 aaKnown RBP30.43■■■□□ 2.46
COPE-207ENST00000597646 SLIT1O75093 1534 aa30.4■■■□□ 2.46
COPE-207ENST00000597646 SYNMO15061 1565 aa30.4■■■□□ 2.46
COPE-207ENST00000597646 ARHGAP23Q9P227 1491 aa30.39■■■□□ 2.46
COPE-207ENST00000597646 TMEM2Q9UHN6 1383 aa30.39■■■□□ 2.45
COPE-207ENST00000597646 NOS1P29475 1434 aa30.39■■■□□ 2.45
COPE-207ENST00000597646 PIP4K2BP78356 416 aa30.37■■■□□ 2.45
COPE-207ENST00000597646 SLC52A1Q9NWF4 448 aa30.37■■■□□ 2.45
COPE-207ENST00000597646 TET3O43151 1660 aa30.36■■■□□ 2.45
COPE-207ENST00000597646 TOM1O60784 492 aa30.36■■■□□ 2.45
COPE-207ENST00000597646 UNC13BO14795 1591 aa30.36■■■□□ 2.45
COPE-207ENST00000597646 RPRD2Q5VT52 1461 aaKnown RBP30.35■■■□□ 2.45
COPE-207ENST00000597646 GCC2Q8IWJ2 1684 aa30.33■■■□□ 2.45
COPE-207ENST00000597646 BCANQ96GW7 911 aa30.32■■■□□ 2.44
COPE-207ENST00000597646 KDM5AP29375 1690 aaKnown RBP30.32■■■□□ 2.44
COPE-207ENST00000597646 NUP155O75694 1391 aa30.31■■■□□ 2.44
COPE-207ENST00000597646 CHGAP10645 457 aaKnown RBP30.3■■■□□ 2.44
COPE-207ENST00000597646 STRCP1A6NGW2 1772 aa30.3■■■□□ 2.44
COPE-207ENST00000597646 ADGRB3O60242 1522 aa30.29■■■□□ 2.44
COPE-207ENST00000597646 SENP3Q9H4L4 574 aaPredicted RBP30.28■■■□□ 2.44
COPE-207ENST00000597646 DISP3Q9P2K9 1392 aa30.27■■■□□ 2.44
COPE-207ENST00000597646 LRRC7Q96NW7 1537 aa30.25■■■□□ 2.43
COPE-207ENST00000597646 IQGAP3Q86VI3 1631 aa30.25■■■□□ 2.43
COPE-207ENST00000597646 E9PCH4 1651 aa30.24■■■□□ 2.43
COPE-207ENST00000597646 SLC26A8Q96RN1 970 aa30.24■■■□□ 2.43
COPE-207ENST00000597646 RRBP1Q9P2E9 1410 aaKnown RBP30.23■■■□□ 2.43
COPE-207ENST00000597646 PPP1R15AO75807 674 aaPredicted RBP30.23■■■□□ 2.43
COPE-207ENST00000597646 HDGFP51858 240 aaKnown RBP30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms