RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 KDM5DQ9BY66 1539 aa13.08□□□□□ -0.32
SNRPA-202ENST00000596860 RNF17Q9BXT8 1623 aaKnown RBP13.07□□□□□ -0.32
SNRPA-202ENST00000596860 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
SNRPA-202ENST00000596860 PRDM15P57071 1507 aaPredicted RBP13.04□□□□□ -0.32
SNRPA-202ENST00000596860 MYT1LQ9UL68 1186 aa13.04□□□□□ -0.32
SNRPA-202ENST00000596860 PPP6R1Q9UPN7 881 aa13.03□□□□□ -0.32
SNRPA-202ENST00000596860 VWDEQ8N2E2 1590 aa13.03□□□□□ -0.32
SNRPA-202ENST00000596860 IQGAP3Q86VI3 1631 aa13.02□□□□□ -0.32
SNRPA-202ENST00000596860 LMTK2Q8IWU2 1503 aa13.01□□□□□ -0.33
SNRPA-202ENST00000596860 MROH1Q8NDA8 1641 aa13.01□□□□□ -0.33
SNRPA-202ENST00000596860 ZC3H13Q5T200 1668 aaKnown RBP13.01□□□□□ -0.33
SNRPA-202ENST00000596860 CLSPNQ9HAW4 1339 aa13□□□□□ -0.33
SNRPA-202ENST00000596860 KANK1Q14678 1352 aa12.98□□□□□ -0.33
SNRPA-202ENST00000596860 TET3O43151 1660 aa12.97□□□□□ -0.33
SNRPA-202ENST00000596860 KIF3BO15066 747 aa12.97□□□□□ -0.33
SNRPA-202ENST00000596860 NUP155O75694 1391 aa12.96□□□□□ -0.33
SNRPA-202ENST00000596860 PZPP20742 1482 aa12.96□□□□□ -0.34
SNRPA-202ENST00000596860 SIGLEC1Q9BZZ2 1709 aa12.96□□□□□ -0.34
SNRPA-202ENST00000596860 DHX57Q6P158 1386 aaKnown RBP12.95□□□□□ -0.34
SNRPA-202ENST00000596860 RPRD2Q5VT52 1461 aaKnown RBP12.94□□□□□ -0.34
SNRPA-202ENST00000596860 ILDR1Q86SU0 546 aaPredicted RBP12.94□□□□□ -0.34
SNRPA-202ENST00000596860 TRIM52Q96A61 297 aa12.93□□□□□ -0.34
SNRPA-202ENST00000596860 PHF23Q9BUL5 403 aaPredicted RBP12.93□□□□□ -0.34
SNRPA-202ENST00000596860 ARHGAP31Q2M1Z3 1444 aa12.93□□□□□ -0.34
SNRPA-202ENST00000596860 CNTLNQ9NXG0 1405 aa12.93□□□□□ -0.34
SNRPA-202ENST00000596860 ABCC3O15438 1527 aa12.93□□□□□ -0.34
SNRPA-202ENST00000596860 EFCAB6Q5THR3 1501 aa12.93□□□□□ -0.34
SNRPA-202ENST00000596860 MROH2AA6NES4 1674 aa12.93□□□□□ -0.34
SNRPA-202ENST00000596860 MPHOSPH9Q99550 1183 aa12.92□□□□□ -0.34
SNRPA-202ENST00000596860 CEP152O94986 1710 aa12.91□□□□□ -0.34
SNRPA-202ENST00000596860 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
SNRPA-202ENST00000596860 CAMSAP1Q5T5Y3 1602 aa12.9□□□□□ -0.34
SNRPA-202ENST00000596860 SENP3Q9H4L4 574 aaPredicted RBP12.89□□□□□ -0.35
SNRPA-202ENST00000596860 E9PCH4 1651 aa12.89□□□□□ -0.35
SNRPA-202ENST00000596860 ADAMTSL3P82987 1691 aa12.89□□□□□ -0.35
SNRPA-202ENST00000596860 GGT6Q6P531 493 aa12.88□□□□□ -0.35
SNRPA-202ENST00000596860 WASHC2CQ9Y4E1 1318 aa12.88□□□□□ -0.35
SNRPA-202ENST00000596860 FER1L4A9Z1Z3 1794 aa12.87□□□□□ -0.35
SNRPA-202ENST00000596860 PTPRTO14522 1441 aa12.87□□□□□ -0.35
SNRPA-202ENST00000596860 SPHKAPQ2M3C7 1700 aa12.86□□□□□ -0.35
SNRPA-202ENST00000596860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.86□□□□□ -0.35
SNRPA-202ENST00000596860 CLTCQ00610 1675 aaKnown RBP12.86□□□□□ -0.35
SNRPA-202ENST00000596860 ANKRD30BQ9BXX2 1392 aa12.85□□□□□ -0.35
SNRPA-202ENST00000596860 PKD2Q13563 968 aa12.85□□□□□ -0.35
SNRPA-202ENST00000596860 CCER1Q8TC90 406 aaPredicted RBP12.85□□□□□ -0.35
SNRPA-202ENST00000596860 NEURL4Q96JN8 1562 aa12.85□□□□□ -0.35
SNRPA-202ENST00000596860 ARID4BQ4LE39 1312 aaPredicted RBP12.85□□□□□ -0.35
SNRPA-202ENST00000596860 TRPM2O94759 1503 aa12.84□□□□□ -0.35
SNRPA-202ENST00000596860 NPATQ14207 1427 aa12.84□□□□□ -0.35
SNRPA-202ENST00000596860 NOS1P29475 1434 aa12.83□□□□□ -0.36
SNRPA-202ENST00000596860 ESF1Q9H501 851 aaKnown RBP12.83□□□□□ -0.36
SNRPA-202ENST00000596860 SPATA31D1Q6ZQQ2 1576 aa12.82□□□□□ -0.36
SNRPA-202ENST00000596860 TIMELESSQ9UNS1 1208 aa12.82□□□□□ -0.36
SNRPA-202ENST00000596860 PTPRMP28827 1452 aa12.82□□□□□ -0.36
SNRPA-202ENST00000596860 PREX1Q8TCU6 1659 aa12.82□□□□□ -0.36
SNRPA-202ENST00000596860 ZMYM3Q14202 1370 aa12.81□□□□□ -0.36
SNRPA-202ENST00000596860 PLA2R1Q13018 1463 aa12.8□□□□□ -0.36
SNRPA-202ENST00000596860 PIK3C2BO00750 1634 aa12.8□□□□□ -0.36
SNRPA-202ENST00000596860 MADDQ8WXG6 1647 aa12.8□□□□□ -0.36
SNRPA-202ENST00000596860 SETD1BQ9UPS6 1966 aaKnown RBP12.8□□□□□ -0.36
SNRPA-202ENST00000596860 ZEB1P37275 1124 aaPredicted RBP12.79□□□□□ -0.36
SNRPA-202ENST00000596860 C3P01024 1663 aa12.79□□□□□ -0.36
SNRPA-202ENST00000596860 CCDC144AA2RUR9 1427 aa12.79□□□□□ -0.36
SNRPA-202ENST00000596860 ERVK-7P63135 1459 aa12.78□□□□□ -0.36
SNRPA-202ENST00000596860 KDM5AP29375 1690 aaKnown RBP12.78□□□□□ -0.36
SNRPA-202ENST00000596860 MLECQ14165 292 aa12.77□□□□□ -0.37
SNRPA-202ENST00000596860 SLC52A1Q9NWF4 448 aa12.77□□□□□ -0.37
SNRPA-202ENST00000596860 CFAP65Q6ZU64 1925 aaKnown RBP12.77□□□□□ -0.37
SNRPA-202ENST00000596860 RIMS1Q86UR5 1692 aaKnown RBP12.77□□□□□ -0.37
SNRPA-202ENST00000596860 KIF1BO60333 1816 aa12.76□□□□□ -0.37
SNRPA-202ENST00000596860 FBXO41Q8TF61 875 aa12.76□□□□□ -0.37
SNRPA-202ENST00000596860 SYNMO15061 1565 aa12.76□□□□□ -0.37
SNRPA-202ENST00000596860 CLTCL1P53675 1640 aa12.74□□□□□ -0.37
SNRPA-202ENST00000596860 STAC3Q96MF2 364 aa12.74□□□□□ -0.37
SNRPA-202ENST00000596860 NLRP1Q9C000 1473 aa12.73□□□□□ -0.37
SNRPA-202ENST00000596860 FOXD1Q16676 465 aa12.73□□□□□ -0.37
SNRPA-202ENST00000596860 ADGRB3O60242 1522 aa12.72□□□□□ -0.37
SNRPA-202ENST00000596860 SPATA31E1Q6ZUB1 1445 aa12.71□□□□□ -0.37
SNRPA-202ENST00000596860 TNRQ92752 1358 aa12.71□□□□□ -0.37
SNRPA-202ENST00000596860 LMTK3Q96Q04 1460 aa12.71□□□□□ -0.38
SNRPA-202ENST00000596860 TMEM131LA2VDJ0 1609 aa12.7□□□□□ -0.38
SNRPA-202ENST00000596860 TONSLQ96HA7 1378 aa12.69□□□□□ -0.38
SNRPA-202ENST00000596860 RPGRIP1LQ68CZ1 1315 aa12.68□□□□□ -0.38
SNRPA-202ENST00000596860 ZNF142P52746 1687 aaPredicted RBP12.68□□□□□ -0.38
SNRPA-202ENST00000596860 SIN3AQ96ST3 1273 aa12.68□□□□□ -0.38
SNRPA-202ENST00000596860 IFT172Q9UG01 1749 aa12.68□□□□□ -0.38
SNRPA-202ENST00000596860 MYO3AQ8NEV4 1616 aa12.67□□□□□ -0.38
SNRPA-202ENST00000596860 UGGT1Q9NYU2 1555 aa12.66□□□□□ -0.38
SNRPA-202ENST00000596860 IDI1Q13907 227 aa12.66□□□□□ -0.38
SNRPA-202ENST00000596860 FBXO31Q5XUX0 539 aaPredicted RBP12.66□□□□□ -0.38
SNRPA-202ENST00000596860 A2ML1A8K2U0 1454 aa12.65□□□□□ -0.38
SNRPA-202ENST00000596860 UBR1Q8IWV7 1749 aa12.65□□□□□ -0.38
SNRPA-202ENST00000596860 ZFYVE9O95405 1425 aa12.65□□□□□ -0.38
SNRPA-202ENST00000596860 PPLO60437 1756 aa12.65□□□□□ -0.38
SNRPA-202ENST00000596860 MYOM2P54296 1465 aa12.65□□□□□ -0.38
SNRPA-202ENST00000596860 UHRF1BP1Q6BDS2 1440 aa12.64□□□□□ -0.39
SNRPA-202ENST00000596860 NEUROD1Q13562 356 aa12.64□□□□□ -0.39
SNRPA-202ENST00000596860 MYO5BQ9ULV0 1848 aa12.64□□□□□ -0.39
SNRPA-202ENST00000596860 CEP170BQ9Y4F5 1589 aaPredicted RBP12.63□□□□□ -0.39
SNRPA-202ENST00000596860 L3MBTL2Q969R5 705 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms