RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 DNMT1P26358 1616 aaKnown RBP16.78■□□□□ 0.28
CHMP2A-202ENST00000596708 LOC105371045A0A1W2PR82 267 aa16.77■□□□□ 0.28
CHMP2A-202ENST00000596708 A2ML1A8K2U0 1454 aa16.77■□□□□ 0.28
CHMP2A-202ENST00000596708 POLR1AO95602 1720 aaPredicted RBP16.76■□□□□ 0.27
CHMP2A-202ENST00000596708 WASHC2CQ9Y4E1 1318 aa16.76■□□□□ 0.27
CHMP2A-202ENST00000596708 TCOF1Q13428 1488 aaKnown RBP16.76■□□□□ 0.27
CHMP2A-202ENST00000596708 FBXO31Q5XUX0 539 aaPredicted RBP16.76■□□□□ 0.27
CHMP2A-202ENST00000596708 ARHGEF5Q12774 1597 aa16.75■□□□□ 0.27
CHMP2A-202ENST00000596708 KDM5DQ9BY66 1539 aa16.75■□□□□ 0.27
CHMP2A-202ENST00000596708 TNRQ92752 1358 aa16.74■□□□□ 0.27
CHMP2A-202ENST00000596708 VPS8Q8N3P4 1428 aa16.73■□□□□ 0.27
CHMP2A-202ENST00000596708 UBAP1LF5GYI3 381 aa16.73■□□□□ 0.27
CHMP2A-202ENST00000596708 LRRC9Q6ZRR7 1453 aa16.73■□□□□ 0.27
CHMP2A-202ENST00000596708 FAM135AQ9P2D6 1515 aa16.72■□□□□ 0.27
CHMP2A-202ENST00000596708 PZPP20742 1482 aa16.72■□□□□ 0.27
CHMP2A-202ENST00000596708 ILDR2Q71H61 639 aa16.69■□□□□ 0.26
CHMP2A-202ENST00000596708 SPATA31D1Q6ZQQ2 1576 aa16.68■□□□□ 0.26
CHMP2A-202ENST00000596708 KANK4Q5T7N3 995 aaPredicted RBP16.68■□□□□ 0.26
CHMP2A-202ENST00000596708 ANKLE2Q86XL3 938 aa16.67■□□□□ 0.26
CHMP2A-202ENST00000596708 THEMISQ8N1K5 641 aaPredicted RBP16.67■□□□□ 0.26
CHMP2A-202ENST00000596708 MIA2Q96PC5 1412 aa16.67■□□□□ 0.26
CHMP2A-202ENST00000596708 MAST1Q9Y2H9 1570 aa16.67■□□□□ 0.26
CHMP2A-202ENST00000596708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.66■□□□□ 0.26
CHMP2A-202ENST00000596708 CEP152O94986 1710 aa16.66■□□□□ 0.26
CHMP2A-202ENST00000596708 NEURL4Q96JN8 1562 aa16.66■□□□□ 0.26
CHMP2A-202ENST00000596708 RNF17Q9BXT8 1623 aaKnown RBP16.66■□□□□ 0.26
CHMP2A-202ENST00000596708 ZC3H13Q5T200 1668 aaKnown RBP16.65■□□□□ 0.26
CHMP2A-202ENST00000596708 UGGT1Q9NYU2 1555 aa16.65■□□□□ 0.26
CHMP2A-202ENST00000596708 MAP3K1Q13233 1512 aa16.65■□□□□ 0.26
CHMP2A-202ENST00000596708 EIF2AK4Q9P2K8 1649 aaKnown RBP16.64■□□□□ 0.25
CHMP2A-202ENST00000596708 NLRP1Q9C000 1473 aa16.64■□□□□ 0.25
CHMP2A-202ENST00000596708 MYOM3Q5VTT5 1437 aa16.63■□□□□ 0.25
CHMP2A-202ENST00000596708 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
CHMP2A-202ENST00000596708 ABCC3O15438 1527 aa16.62■□□□□ 0.25
CHMP2A-202ENST00000596708 APLP2Q06481 763 aa16.62■□□□□ 0.25
CHMP2A-202ENST00000596708 SHANK2Q9UPX8 1470 aa16.61■□□□□ 0.25
CHMP2A-202ENST00000596708 CPS1P31327 1500 aa16.61■□□□□ 0.25
CHMP2A-202ENST00000596708 DEPDC5O75140 1603 aa16.6■□□□□ 0.25
CHMP2A-202ENST00000596708 SOCS7O14512 581 aa16.6■□□□□ 0.25
CHMP2A-202ENST00000596708 TOM1O60784 492 aa16.6■□□□□ 0.25
CHMP2A-202ENST00000596708 PIP4K2BP78356 416 aa16.6■□□□□ 0.25
CHMP2A-202ENST00000596708 NPHP4O75161 1426 aaPredicted RBP16.6■□□□□ 0.25
CHMP2A-202ENST00000596708 IQGAP1P46940 1657 aa16.59■□□□□ 0.25
CHMP2A-202ENST00000596708 DUOX2Q9NRD8 1548 aa16.59■□□□□ 0.25
CHMP2A-202ENST00000596708 MROH1Q8NDA8 1641 aa16.58■□□□□ 0.24
CHMP2A-202ENST00000596708 CROCC2H7BZ55 1655 aa16.58■□□□□ 0.24
CHMP2A-202ENST00000596708 PTPN23Q9H3S7 1636 aa16.57■□□□□ 0.24
CHMP2A-202ENST00000596708 MED14O60244 1454 aa16.57■□□□□ 0.24
CHMP2A-202ENST00000596708 ERVK-7P63135 1459 aa16.57■□□□□ 0.24
CHMP2A-202ENST00000596708 VWDEQ8N2E2 1590 aa16.56■□□□□ 0.24
CHMP2A-202ENST00000596708 RRP7BPQ9NSQ0 103 aa16.56■□□□□ 0.24
CHMP2A-202ENST00000596708 UBR1Q8IWV7 1749 aa16.56■□□□□ 0.24
CHMP2A-202ENST00000596708 STRCP1A6NGW2 1772 aa16.55■□□□□ 0.24
CHMP2A-202ENST00000596708 HSPA1LP34931 641 aa16.54■□□□□ 0.24
CHMP2A-202ENST00000596708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.54■□□□□ 0.244e-8■■■■□ 21.9
CHMP2A-202ENST00000596708 KIF15Q9NS87 1388 aa16.53■□□□□ 0.24
CHMP2A-202ENST00000596708 ABCC5O15440 1437 aa16.53■□□□□ 0.24
CHMP2A-202ENST00000596708 ERBINQ96RT1 1412 aa16.51■□□□□ 0.23
CHMP2A-202ENST00000596708 CHIC2Q9UKJ5 165 aa16.5■□□□□ 0.23
CHMP2A-202ENST00000596708 DAPK1P53355 1430 aa16.5■□□□□ 0.23
CHMP2A-202ENST00000596708 PRDM15P57071 1507 aaPredicted RBP16.5■□□□□ 0.23
CHMP2A-202ENST00000596708 TXNDC2Q86VQ3 553 aa16.49■□□□□ 0.23
CHMP2A-202ENST00000596708 KANK1Q14678 1352 aa16.49■□□□□ 0.23
CHMP2A-202ENST00000596708 STAG3Q9UJ98 1225 aa16.48■□□□□ 0.23
CHMP2A-202ENST00000596708 ARHGAP31Q2M1Z3 1444 aa16.47■□□□□ 0.23
CHMP2A-202ENST00000596708 FGD6Q6ZV73 1430 aa16.47■□□□□ 0.23
CHMP2A-202ENST00000596708 SENP3Q9H4L4 574 aaPredicted RBP16.47■□□□□ 0.23
CHMP2A-202ENST00000596708 PIK3C2BO00750 1634 aa16.47■□□□□ 0.23
CHMP2A-202ENST00000596708 SCAF11Q99590 1463 aaKnown RBP16.47■□□□□ 0.23
CHMP2A-202ENST00000596708 LRRC7Q96NW7 1537 aa16.46■□□□□ 0.23
CHMP2A-202ENST00000596708 LTKP29376 864 aa16.46■□□□□ 0.23
CHMP2A-202ENST00000596708 EID1Q9Y6B2 187 aa16.46■□□□□ 0.23
CHMP2A-202ENST00000596708 ANKRD30AQ9BXX3 1397 aa16.46■□□□□ 0.23
CHMP2A-202ENST00000596708 SYNMO15061 1565 aa16.46■□□□□ 0.23
CHMP2A-202ENST00000596708 ALKQ9UM73 1620 aa16.45■□□□□ 0.22
CHMP2A-202ENST00000596708 MED1Q15648 1581 aaPredicted RBP16.44■□□□□ 0.22
CHMP2A-202ENST00000596708 SLIT1O75093 1534 aa16.44■□□□□ 0.22
CHMP2A-202ENST00000596708 ARHGAP23Q9P227 1491 aa16.43■□□□□ 0.22
CHMP2A-202ENST00000596708 XIRP1Q702N8 1843 aaKnown RBP16.43■□□□□ 0.22
CHMP2A-202ENST00000596708 FAM50AQ14320 339 aaKnown RBP16.41■□□□□ 0.22
CHMP2A-202ENST00000596708 IDI1Q13907 227 aa16.4■□□□□ 0.22
CHMP2A-202ENST00000596708 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
CHMP2A-202ENST00000596708 KDM5AP29375 1690 aaKnown RBP16.4■□□□□ 0.22
CHMP2A-202ENST00000596708 TMEM2Q9UHN6 1383 aa16.39■□□□□ 0.21
CHMP2A-202ENST00000596708 EFCAB6Q5THR3 1501 aa16.39■□□□□ 0.21
CHMP2A-202ENST00000596708 LMTK2Q8IWU2 1503 aa16.39■□□□□ 0.21
CHMP2A-202ENST00000596708 MYO5BQ9ULV0 1848 aa16.38■□□□□ 0.21
CHMP2A-202ENST00000596708 BCANQ96GW7 911 aa16.35■□□□□ 0.21
CHMP2A-202ENST00000596708 ADGRL2O95490 1459 aa16.35■□□□□ 0.21
CHMP2A-202ENST00000596708 SLC26A8Q96RN1 970 aa16.33■□□□□ 0.2
CHMP2A-202ENST00000596708 SLC52A1Q9NWF4 448 aa16.33■□□□□ 0.2
CHMP2A-202ENST00000596708 NOS1P29475 1434 aa16.33■□□□□ 0.2
CHMP2A-202ENST00000596708 ADGRB3O60242 1522 aa16.32■□□□□ 0.2
CHMP2A-202ENST00000596708 KCNA6P17658 529 aa16.32■□□□□ 0.2
CHMP2A-202ENST00000596708 PROSER2Q86WR7 435 aaPredicted RBP16.32■□□□□ 0.2
CHMP2A-202ENST00000596708 ANKRD50Q9ULJ7 1429 aa16.32■□□□□ 0.2
CHMP2A-202ENST00000596708 GCC2Q8IWJ2 1684 aa16.31■□□□□ 0.2
CHMP2A-202ENST00000596708 TET3O43151 1660 aa16.3■□□□□ 0.2
CHMP2A-202ENST00000596708 TMEM94Q12767 1356 aa16.3■□□□□ 0.2
CHMP2A-202ENST00000596708 RBM33Q96EV2 1170 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms