RNA–Protein interactions for RNA: ENST00000596403.1

SIPA1L3-207, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 3

Gene SIPA1L3, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-207ENST00000596403 FAM135AQ9P2D6 1515 aa23.34■■□□□ 1.33
SIPA1L3-207ENST00000596403 TNRQ92752 1358 aa23.34■■□□□ 1.33
SIPA1L3-207ENST00000596403 TIAM1Q13009 1591 aa23.33■■□□□ 1.33
SIPA1L3-207ENST00000596403 TOM1O60784 492 aa23.33■■□□□ 1.33
SIPA1L3-207ENST00000596403 TSPY4P0CV99 314 aa23.33■■□□□ 1.33
SIPA1L3-207ENST00000596403 TSPY10P0CW01 314 aa23.33■■□□□ 1.33
SIPA1L3-207ENST00000596403 THEMISQ8N1K5 641 aaPredicted RBP23.32■■□□□ 1.32
SIPA1L3-207ENST00000596403 CCDC141Q6ZP82 1450 aa23.31■■□□□ 1.32
SIPA1L3-207ENST00000596403 ANKLE2Q86XL3 938 aa23.31■■□□□ 1.32
SIPA1L3-207ENST00000596403 SCAF1Q9H7N4 1312 aaKnown RBP23.29■■□□□ 1.32
SIPA1L3-207ENST00000596403 PZPP20742 1482 aa23.28■■□□□ 1.32
SIPA1L3-207ENST00000596403 KDM5DQ9BY66 1539 aa23.28■■□□□ 1.32
SIPA1L3-207ENST00000596403 FBXO31Q5XUX0 539 aaPredicted RBP23.27■■□□□ 1.32
SIPA1L3-207ENST00000596403 CPS1P31327 1500 aa23.27■■□□□ 1.32
SIPA1L3-207ENST00000596403 DNMT1P26358 1616 aaKnown RBP23.26■■□□□ 1.31
SIPA1L3-207ENST00000596403 NLRP1Q9C000 1473 aa23.24■■□□□ 1.31
SIPA1L3-207ENST00000596403 MIA2Q96PC5 1412 aa23.24■■□□□ 1.31
SIPA1L3-207ENST00000596403 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
SIPA1L3-207ENST00000596403 NCOA2Q15596 1464 aa23.24■■□□□ 1.31
SIPA1L3-207ENST00000596403 PIP4K2BP78356 416 aa23.22■■□□□ 1.31
SIPA1L3-207ENST00000596403 SHANK2Q9UPX8 1470 aa23.22■■□□□ 1.31
SIPA1L3-207ENST00000596403 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.2■■□□□ 1.3
SIPA1L3-207ENST00000596403 HSPA1LP34931 641 aa23.17■■□□□ 1.3
SIPA1L3-207ENST00000596403 NPHP4O75161 1426 aaPredicted RBP23.16■■□□□ 1.3
SIPA1L3-207ENST00000596403 UGGT1Q9NYU2 1555 aa23.16■■□□□ 1.3
SIPA1L3-207ENST00000596403 ARHGEF5Q12774 1597 aa23.15■■□□□ 1.3
SIPA1L3-207ENST00000596403 POLR1AO95602 1720 aaPredicted RBP23.14■■□□□ 1.3
SIPA1L3-207ENST00000596403 MED14O60244 1454 aa23.13■■□□□ 1.29
SIPA1L3-207ENST00000596403 NEURL4Q96JN8 1562 aa23.13■■□□□ 1.29
SIPA1L3-207ENST00000596403 DEPDC5O75140 1603 aa23.09■■□□□ 1.29
SIPA1L3-207ENST00000596403 PHF23Q9BUL5 403 aaPredicted RBP23.09■■□□□ 1.29
SIPA1L3-207ENST00000596403 LRRC9Q6ZRR7 1453 aa23.05■■□□□ 1.28
SIPA1L3-207ENST00000596403 VWDEQ8N2E2 1590 aa23.05■■□□□ 1.28
SIPA1L3-207ENST00000596403 ABCC3O15438 1527 aa23.04■■□□□ 1.28
SIPA1L3-207ENST00000596403 VPS8Q8N3P4 1428 aa23.04■■□□□ 1.28
SIPA1L3-207ENST00000596403 ZC3H13Q5T200 1668 aaKnown RBP23.03■■□□□ 1.28
SIPA1L3-207ENST00000596403 MAST1Q9Y2H9 1570 aa23.03■■□□□ 1.28
SIPA1L3-207ENST00000596403 MYOM3Q5VTT5 1437 aa23.02■■□□□ 1.28
SIPA1L3-207ENST00000596403 RNF17Q9BXT8 1623 aaKnown RBP23.02■■□□□ 1.28
SIPA1L3-207ENST00000596403 ERVK-7P63135 1459 aa23.02■■□□□ 1.28
SIPA1L3-207ENST00000596403 MED1Q15648 1581 aaPredicted RBP23.01■■□□□ 1.27
SIPA1L3-207ENST00000596403 EID1Q9Y6B2 187 aa23.01■■□□□ 1.27
SIPA1L3-207ENST00000596403 EIF2AK4Q9P2K8 1649 aaKnown RBP23■■□□□ 1.27
SIPA1L3-207ENST00000596403 IQGAP1P46940 1657 aa23■■□□□ 1.27
SIPA1L3-207ENST00000596403 MAP3K1Q13233 1512 aa22.98■■□□□ 1.27
SIPA1L3-207ENST00000596403 DUOX2Q9NRD8 1548 aa22.98■■□□□ 1.27
SIPA1L3-207ENST00000596403 TXNDC2Q86VQ3 553 aa22.97■■□□□ 1.27
SIPA1L3-207ENST00000596403 APLP2Q06481 763 aa22.96■■□□□ 1.27
SIPA1L3-207ENST00000596403 STAG3Q9UJ98 1225 aa22.96■■□□□ 1.27
SIPA1L3-207ENST00000596403 SCAF11Q99590 1463 aaKnown RBP22.96■■□□□ 1.27
SIPA1L3-207ENST00000596403 LRRC7Q96NW7 1537 aa22.96■■□□□ 1.27
SIPA1L3-207ENST00000596403 SYNMO15061 1565 aa22.94■■□□□ 1.26
SIPA1L3-207ENST00000596403 ARHGAP31Q2M1Z3 1444 aa22.94■■□□□ 1.26
SIPA1L3-207ENST00000596403 KANK1Q14678 1352 aa22.94■■□□□ 1.26
SIPA1L3-207ENST00000596403 KIF15Q9NS87 1388 aa22.93■■□□□ 1.26
SIPA1L3-207ENST00000596403 KANK4Q5T7N3 995 aaPredicted RBP22.92■■□□□ 1.26
SIPA1L3-207ENST00000596403 ERBINQ96RT1 1412 aa22.91■■□□□ 1.26
SIPA1L3-207ENST00000596403 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.25
SIPA1L3-207ENST00000596403 SENP3Q9H4L4 574 aaPredicted RBP22.89■■□□□ 1.25
SIPA1L3-207ENST00000596403 RRP7BPQ9NSQ0 103 aa22.89■■□□□ 1.25
SIPA1L3-207ENST00000596403 LTKP29376 864 aa22.88■■□□□ 1.25
SIPA1L3-207ENST00000596403 SLIT1O75093 1534 aa22.87■■□□□ 1.25
SIPA1L3-207ENST00000596403 ARHGAP23Q9P227 1491 aa22.87■■□□□ 1.25
SIPA1L3-207ENST00000596403 MROH1Q8NDA8 1641 aa22.86■■□□□ 1.25
SIPA1L3-207ENST00000596403 PRDM15P57071 1507 aaPredicted RBP22.85■■□□□ 1.25
SIPA1L3-207ENST00000596403 ALKQ9UM73 1620 aa22.85■■□□□ 1.25
SIPA1L3-207ENST00000596403 UBR1Q8IWV7 1749 aa22.84■■□□□ 1.25
SIPA1L3-207ENST00000596403 TMEM2Q9UHN6 1383 aa22.84■■□□□ 1.25
SIPA1L3-207ENST00000596403 ANKRD30AQ9BXX3 1397 aa22.82■■□□□ 1.24
SIPA1L3-207ENST00000596403 LOC105371045A0A1W2PR82 267 aa22.82■■□□□ 1.24
SIPA1L3-207ENST00000596403 CEP152O94986 1710 aa22.82■■□□□ 1.24
SIPA1L3-207ENST00000596403 ABCC5O15440 1437 aa22.82■■□□□ 1.24
SIPA1L3-207ENST00000596403 KCNA6P17658 529 aa22.79■■□□□ 1.24
SIPA1L3-207ENST00000596403 FAM135BQ49AJ0 1406 aa22.79■■□□□ 1.24
SIPA1L3-207ENST00000596403 DAPK1P53355 1430 aa22.78■■□□□ 1.24
SIPA1L3-207ENST00000596403 STRCP1A6NGW2 1772 aa22.78■■□□□ 1.24
SIPA1L3-207ENST00000596403 IDI1Q13907 227 aa22.77■■□□□ 1.24
SIPA1L3-207ENST00000596403 SLC52A1Q9NWF4 448 aa22.77■■□□□ 1.24
SIPA1L3-207ENST00000596403 HDGFP51858 240 aaKnown RBP22.76■■□□□ 1.23
SIPA1L3-207ENST00000596403 BCANQ96GW7 911 aa22.76■■□□□ 1.23
SIPA1L3-207ENST00000596403 EFCAB6Q5THR3 1501 aa22.76■■□□□ 1.23
SIPA1L3-207ENST00000596403 PROSER2Q86WR7 435 aaPredicted RBP22.75■■□□□ 1.23
SIPA1L3-207ENST00000596403 TMEM94Q12767 1356 aa22.75■■□□□ 1.23
SIPA1L3-207ENST00000596403 LMTK2Q8IWU2 1503 aa22.74■■□□□ 1.23
SIPA1L3-207ENST00000596403 PTPN23Q9H3S7 1636 aa22.74■■□□□ 1.23
SIPA1L3-207ENST00000596403 CFAP65Q6ZU64 1925 aaKnown RBP22.74■■□□□ 1.23
SIPA1L3-207ENST00000596403 CHIC2Q9UKJ5 165 aa22.73■■□□□ 1.23
SIPA1L3-207ENST00000596403 FGD6Q6ZV73 1430 aa22.73■■□□□ 1.23
SIPA1L3-207ENST00000596403 SLC26A8Q96RN1 970 aa22.71■■□□□ 1.23
SIPA1L3-207ENST00000596403 PIK3C2BO00750 1634 aa22.71■■□□□ 1.23
SIPA1L3-207ENST00000596403 KDM5AP29375 1690 aaKnown RBP22.71■■□□□ 1.23
SIPA1L3-207ENST00000596403 CROCC2H7BZ55 1655 aa22.7■■□□□ 1.22
SIPA1L3-207ENST00000596403 MSH6P52701 1360 aa22.68■■□□□ 1.22
SIPA1L3-207ENST00000596403 NOS1P29475 1434 aa22.67■■□□□ 1.22
SIPA1L3-207ENST00000596403 NKTRP30414 1462 aaKnown RBP22.66■■□□□ 1.22
SIPA1L3-207ENST00000596403 PPP1R15AO75807 674 aaPredicted RBP22.66■■□□□ 1.22
SIPA1L3-207ENST00000596403 RGS17Q9UGC6 210 aaPredicted RBP22.65■■□□□ 1.22
SIPA1L3-207ENST00000596403 RPRD2Q5VT52 1461 aaKnown RBP22.64■■□□□ 1.21
SIPA1L3-207ENST00000596403 ADGRB3O60242 1522 aa22.62■■□□□ 1.21
SIPA1L3-207ENST00000596403 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms