RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 DUOX2Q9NRD8 1548 aa24.49■■□□□ 1.51
ZNF550-207ENST00000595560 KDM5DQ9BY66 1539 aa24.48■■□□□ 1.51
ZNF550-207ENST00000595560 HSPA2P54652 639 aa24.45■■□□□ 1.5
ZNF550-207ENST00000595560 KIF15Q9NS87 1388 aa24.44■■□□□ 1.5
ZNF550-207ENST00000595560 ZC3H13Q5T200 1668 aaKnown RBP24.43■■□□□ 1.5
ZNF550-207ENST00000595560 PTPRKQ15262 1439 aa24.42■■□□□ 1.5
ZNF550-207ENST00000595560 MROH1Q8NDA8 1641 aa24.42■■□□□ 1.5
ZNF550-207ENST00000595560 ERBINQ96RT1 1412 aa24.41■■□□□ 1.5
ZNF550-207ENST00000595560 MYO3AQ8NEV4 1616 aa24.39■■□□□ 1.5
ZNF550-207ENST00000595560 ZNF142P52746 1687 aaPredicted RBP24.39■■□□□ 1.49
ZNF550-207ENST00000595560 ANKRD30AQ9BXX3 1397 aa24.39■■□□□ 1.49
ZNF550-207ENST00000595560 ADGRL2O95490 1459 aa24.38■■□□□ 1.49
ZNF550-207ENST00000595560 FAM50AQ14320 339 aaKnown RBP24.38■■□□□ 1.49
ZNF550-207ENST00000595560 WASHC2CQ9Y4E1 1318 aa24.37■■□□□ 1.49
ZNF550-207ENST00000595560 PZPP20742 1482 aa24.37■■□□□ 1.49
ZNF550-207ENST00000595560 NCOA1Q15788 1441 aa24.36■■□□□ 1.49
ZNF550-207ENST00000595560 ABCC3O15438 1527 aa24.36■■□□□ 1.49
ZNF550-207ENST00000595560 PRDM15P57071 1507 aaPredicted RBP24.36■■□□□ 1.49
ZNF550-207ENST00000595560 RRP7BPQ9NSQ0 103 aa24.36■■□□□ 1.49
ZNF550-207ENST00000595560 DEPDC5O75140 1603 aa24.35■■□□□ 1.49
ZNF550-207ENST00000595560 STRCQ7RTU9 1775 aa24.34■■□□□ 1.49
ZNF550-207ENST00000595560 CEP152O94986 1710 aa24.33■■□□□ 1.49
ZNF550-207ENST00000595560 CHIC2Q9UKJ5 165 aa24.33■■□□□ 1.49
ZNF550-207ENST00000595560 CEP170BQ9Y4F5 1589 aaPredicted RBP24.32■■□□□ 1.48
ZNF550-207ENST00000595560 CAMSAP1Q5T5Y3 1602 aa24.31■■□□□ 1.48
ZNF550-207ENST00000595560 PPARGC1BQ86YN6 1023 aaKnown RBP24.3■■□□□ 1.48
ZNF550-207ENST00000595560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.29■■□□□ 1.48
ZNF550-207ENST00000595560 TNRQ92752 1358 aa24.26■■□□□ 1.47
ZNF550-207ENST00000595560 FBXO31Q5XUX0 539 aaPredicted RBP24.25■■□□□ 1.47
ZNF550-207ENST00000595560 A2ML1A8K2U0 1454 aa24.25■■□□□ 1.47
ZNF550-207ENST00000595560 SPATA31D1Q6ZQQ2 1576 aa24.25■■□□□ 1.47
ZNF550-207ENST00000595560 VWDEQ8N2E2 1590 aa24.24■■□□□ 1.47
ZNF550-207ENST00000595560 ROCK1Q13464 1354 aa24.22■■□□□ 1.47
ZNF550-207ENST00000595560 PLA2R1Q13018 1463 aa24.21■■□□□ 1.47
ZNF550-207ENST00000595560 ANKRD50Q9ULJ7 1429 aa24.21■■□□□ 1.47
ZNF550-207ENST00000595560 LMTK2Q8IWU2 1503 aa24.2■■□□□ 1.47
ZNF550-207ENST00000595560 ERVK-7P63135 1459 aa24.2■■□□□ 1.47
ZNF550-207ENST00000595560 NLRP1Q9C000 1473 aa24.2■■□□□ 1.47
ZNF550-207ENST00000595560 ARHGAP31Q2M1Z3 1444 aa24.2■■□□□ 1.46
ZNF550-207ENST00000595560 RRBP1Q9P2E9 1410 aaKnown RBP24.2■■□□□ 1.46
ZNF550-207ENST00000595560 KANK1Q14678 1352 aa24.2■■□□□ 1.46
ZNF550-207ENST00000595560 DMRT2Q9Y5R5 561 aa24.2■■□□□ 1.46
ZNF550-207ENST00000595560 PTPRTO14522 1441 aa24.18■■□□□ 1.46
ZNF550-207ENST00000595560 CFAP65Q6ZU64 1925 aaKnown RBP24.18■■□□□ 1.46
ZNF550-207ENST00000595560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.16■■□□□ 1.46
ZNF550-207ENST00000595560 UNC13BO14795 1591 aa24.15■■□□□ 1.46
ZNF550-207ENST00000595560 EFCAB6Q5THR3 1501 aa24.13■■□□□ 1.45
ZNF550-207ENST00000595560 POLR1AO95602 1720 aaPredicted RBP24.13■■□□□ 1.45
ZNF550-207ENST00000595560 UGGT1Q9NYU2 1555 aa24.12■■□□□ 1.45
ZNF550-207ENST00000595560 ITGAEP38570 1179 aa24.1■■□□□ 1.45
ZNF550-207ENST00000595560 PKD2Q13563 968 aa24.1■■□□□ 1.45
ZNF550-207ENST00000595560 TET3O43151 1660 aa24.08■■□□□ 1.45
ZNF550-207ENST00000595560 NCKAP5LQ9HCH0 1330 aa24.08■■□□□ 1.44
ZNF550-207ENST00000595560 GCC2Q8IWJ2 1684 aa24.07■■□□□ 1.44
ZNF550-207ENST00000595560 UBR1Q8IWV7 1749 aa24.07■■□□□ 1.44
ZNF550-207ENST00000595560 THEMISQ8N1K5 641 aaPredicted RBP24.05■■□□□ 1.44
ZNF550-207ENST00000595560 RPRD2Q5VT52 1461 aaKnown RBP24.05■■□□□ 1.44
ZNF550-207ENST00000595560 NEURL4Q96JN8 1562 aa24.04■■□□□ 1.44
ZNF550-207ENST00000595560 IQGAP3Q86VI3 1631 aa24.04■■□□□ 1.44
ZNF550-207ENST00000595560 SYNMO15061 1565 aa24.03■■□□□ 1.44
ZNF550-207ENST00000595560 ILDR1Q86SU0 546 aaPredicted RBP24.02■■□□□ 1.44
ZNF550-207ENST00000595560 KDM5AP29375 1690 aaKnown RBP24.02■■□□□ 1.44
ZNF550-207ENST00000595560 NOS1P29475 1434 aa24.01■■□□□ 1.43
ZNF550-207ENST00000595560 PIK3C2BO00750 1634 aa24.01■■□□□ 1.43
ZNF550-207ENST00000595560 LTBP4Q8N2S1 1624 aa23.99■■□□□ 1.43
ZNF550-207ENST00000595560 CERKQ8TCT0 537 aa23.98■■□□□ 1.43
ZNF550-207ENST00000595560 E9PCH4 1651 aa23.97■■□□□ 1.43
ZNF550-207ENST00000595560 MED14O60244 1454 aa23.97■■□□□ 1.43
ZNF550-207ENST00000595560 ANKLE2Q86XL3 938 aa23.97■■□□□ 1.43
ZNF550-207ENST00000595560 FBXO41Q8TF61 875 aa23.97■■□□□ 1.43
ZNF550-207ENST00000595560 SLIT1O75093 1534 aa23.95■■□□□ 1.43
ZNF550-207ENST00000595560 NAIPQ13075 1403 aa23.95■■□□□ 1.42
ZNF550-207ENST00000595560 IQGAP1P46940 1657 aa23.94■■□□□ 1.42
ZNF550-207ENST00000595560 ARHGAP23Q9P227 1491 aa23.94■■□□□ 1.42
ZNF550-207ENST00000595560 NUP155O75694 1391 aa23.93■■□□□ 1.42
ZNF550-207ENST00000595560 HFM1A2PYH4 1435 aa23.93■■□□□ 1.42
ZNF550-207ENST00000595560 NPHP4O75161 1426 aaPredicted RBP23.92■■□□□ 1.42
ZNF550-207ENST00000595560 ADGRB3O60242 1522 aa23.91■■□□□ 1.42
ZNF550-207ENST00000595560 SCAF11Q99590 1463 aaKnown RBP23.9■■□□□ 1.42
ZNF550-207ENST00000595560 IDI1Q13907 227 aa23.9■■□□□ 1.42
ZNF550-207ENST00000595560 ZNF335Q9H4Z2 1342 aaPredicted RBP23.89■■□□□ 1.42
ZNF550-207ENST00000595560 SLC52A1Q9NWF4 448 aa23.89■■□□□ 1.41
ZNF550-207ENST00000595560 IQSEC2Q5JU85 1478 aa23.88■■□□□ 1.41
ZNF550-207ENST00000595560 TMEM2Q9UHN6 1383 aa23.87■■□□□ 1.41
ZNF550-207ENST00000595560 STAG3Q9UJ98 1225 aa23.85■■□□□ 1.41
ZNF550-207ENST00000595560 MYO5BQ9ULV0 1848 aa23.84■■□□□ 1.41
ZNF550-207ENST00000595560 SPHKAPQ2M3C7 1700 aa23.83■■□□□ 1.41
ZNF550-207ENST00000595560 TMEM131LA2VDJ0 1609 aa23.83■■□□□ 1.41
ZNF550-207ENST00000595560 LTKP29376 864 aa23.81■■□□□ 1.4
ZNF550-207ENST00000595560 TXNDC2Q86VQ3 553 aa23.81■■□□□ 1.4
ZNF550-207ENST00000595560 EID1Q9Y6B2 187 aa23.81■■□□□ 1.4
ZNF550-207ENST00000595560 CPS1P31327 1500 aa23.8■■□□□ 1.4
ZNF550-207ENST00000595560 STRCP1A6NGW2 1772 aa23.75■■□□□ 1.39
ZNF550-207ENST00000595560 ZFYVE9O95405 1425 aa23.75■■□□□ 1.39
ZNF550-207ENST00000595560 TRPM2O94759 1503 aa23.72■■□□□ 1.39
ZNF550-207ENST00000595560 RIMS2Q9UQ26 1411 aa23.7■■□□□ 1.38
ZNF550-207ENST00000595560 TRIM52Q96A61 297 aa23.7■■□□□ 1.38
ZNF550-207ENST00000595560 CLTCL1P53675 1640 aa23.69■■□□□ 1.38
ZNF550-207ENST00000595560 CHGAP10645 457 aaKnown RBP23.66■■□□□ 1.38
ZNF550-207ENST00000595560 PLEKHG1Q9ULL1 1385 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms