RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 DNMT1P26358 1616 aaKnown RBP24.89■■□□□ 1.57
IRF3-210ENST00000595240 CROCC2H7BZ55 1655 aa24.88■■□□□ 1.57
IRF3-210ENST00000595240 DUOX2Q9NRD8 1548 aa24.88■■□□□ 1.57
IRF3-210ENST00000595240 RNF17Q9BXT8 1623 aaKnown RBP24.88■■□□□ 1.57
IRF3-210ENST00000595240 KIF15Q9NS87 1388 aa24.88■■□□□ 1.57
IRF3-210ENST00000595240 EIF2AK4Q9P2K8 1649 aaKnown RBP24.87■■□□□ 1.57
IRF3-210ENST00000595240 ILDR1Q86SU0 546 aaPredicted RBP24.87■■□□□ 1.57
IRF3-210ENST00000595240 STRCQ7RTU9 1775 aa24.85■■□□□ 1.57
IRF3-210ENST00000595240 PZPP20742 1482 aa24.85■■□□□ 1.57
IRF3-210ENST00000595240 RRP7BPQ9NSQ0 103 aa24.84■■□□□ 1.57
IRF3-210ENST00000595240 DMRT2Q9Y5R5 561 aa24.84■■□□□ 1.57
IRF3-210ENST00000595240 MYO3AQ8NEV4 1616 aa24.83■■□□□ 1.57
IRF3-210ENST00000595240 NCOA1Q15788 1441 aa24.83■■□□□ 1.57
IRF3-210ENST00000595240 FBXO31Q5XUX0 539 aaPredicted RBP24.82■■□□□ 1.56
IRF3-210ENST00000595240 ERBINQ96RT1 1412 aa24.82■■□□□ 1.56
IRF3-210ENST00000595240 ABCC3O15438 1527 aa24.81■■□□□ 1.56
IRF3-210ENST00000595240 MROH1Q8NDA8 1641 aa24.81■■□□□ 1.56
IRF3-210ENST00000595240 ANKRD30AQ9BXX3 1397 aa24.8■■□□□ 1.56
IRF3-210ENST00000595240 CEP170BQ9Y4F5 1589 aaPredicted RBP24.8■■□□□ 1.56
IRF3-210ENST00000595240 TNRQ92752 1358 aa24.8■■□□□ 1.56
IRF3-210ENST00000595240 ZNF142P52746 1687 aaPredicted RBP24.79■■□□□ 1.56
IRF3-210ENST00000595240 FAM50AQ14320 339 aaKnown RBP24.79■■□□□ 1.56
IRF3-210ENST00000595240 CHIC2Q9UKJ5 165 aa24.79■■□□□ 1.56
IRF3-210ENST00000595240 PTPRTO14522 1441 aa24.78■■□□□ 1.56
IRF3-210ENST00000595240 CAMSAP1Q5T5Y3 1602 aa24.78■■□□□ 1.56
IRF3-210ENST00000595240 ZC3H13Q5T200 1668 aaKnown RBP24.76■■□□□ 1.55
IRF3-210ENST00000595240 A2ML1A8K2U0 1454 aa24.76■■□□□ 1.55
IRF3-210ENST00000595240 ADGRL2O95490 1459 aa24.76■■□□□ 1.55
IRF3-210ENST00000595240 PLA2R1Q13018 1463 aa24.75■■□□□ 1.55
IRF3-210ENST00000595240 PRDM15P57071 1507 aaPredicted RBP24.74■■□□□ 1.55
IRF3-210ENST00000595240 FBXO41Q8TF61 875 aa24.72■■□□□ 1.55
IRF3-210ENST00000595240 NCKAP5LQ9HCH0 1330 aa24.7■■□□□ 1.54
IRF3-210ENST00000595240 NLRP1Q9C000 1473 aa24.7■■□□□ 1.54
IRF3-210ENST00000595240 DEPDC5O75140 1603 aa24.69■■□□□ 1.54
IRF3-210ENST00000595240 PKD2Q13563 968 aa24.69■■□□□ 1.54
IRF3-210ENST00000595240 SPATA31D1Q6ZQQ2 1576 aa24.68■■□□□ 1.54
IRF3-210ENST00000595240 PPARGC1BQ86YN6 1023 aaKnown RBP24.68■■□□□ 1.54
IRF3-210ENST00000595240 CERKQ8TCT0 537 aa24.68■■□□□ 1.54
IRF3-210ENST00000595240 ERVK-7P63135 1459 aa24.67■■□□□ 1.54
IRF3-210ENST00000595240 ARHGAP31Q2M1Z3 1444 aa24.67■■□□□ 1.54
IRF3-210ENST00000595240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.66■■□□□ 1.54
IRF3-210ENST00000595240 CEP152O94986 1710 aa24.66■■□□□ 1.54
IRF3-210ENST00000595240 KANK1Q14678 1352 aa24.65■■□□□ 1.54
IRF3-210ENST00000595240 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.63■■□□□ 1.539e-6■□□□□ 9.6
IRF3-210ENST00000595240 VWDEQ8N2E2 1590 aa24.63■■□□□ 1.53
IRF3-210ENST00000595240 ANKRD50Q9ULJ7 1429 aa24.62■■□□□ 1.53
IRF3-210ENST00000595240 LMTK2Q8IWU2 1503 aa24.61■■□□□ 1.53
IRF3-210ENST00000595240 ROCK1Q13464 1354 aa24.6■■□□□ 1.53
IRF3-210ENST00000595240 THEMISQ8N1K5 641 aaPredicted RBP24.6■■□□□ 1.53
IRF3-210ENST00000595240 UGGT1Q9NYU2 1555 aa24.59■■□□□ 1.53
IRF3-210ENST00000595240 LTBP4Q8N2S1 1624 aa24.57■■□□□ 1.52
IRF3-210ENST00000595240 ANKLE2Q86XL3 938 aa24.54■■□□□ 1.52
IRF3-210ENST00000595240 NEURL4Q96JN8 1562 aa24.54■■□□□ 1.52
IRF3-210ENST00000595240 ZNF335Q9H4Z2 1342 aaPredicted RBP24.52■■□□□ 1.52
IRF3-210ENST00000595240 RRBP1Q9P2E9 1410 aaKnown RBP24.52■■□□□ 1.52
IRF3-210ENST00000595240 EFCAB6Q5THR3 1501 aa24.51■■□□□ 1.51
IRF3-210ENST00000595240 ITGAEP38570 1179 aa24.51■■□□□ 1.51
IRF3-210ENST00000595240 POLR1AO95602 1720 aaPredicted RBP24.49■■□□□ 1.51
IRF3-210ENST00000595240 MED14O60244 1454 aa24.48■■□□□ 1.51
IRF3-210ENST00000595240 CFAP65Q6ZU64 1925 aaKnown RBP24.48■■□□□ 1.51
IRF3-210ENST00000595240 NOS1P29475 1434 aa24.47■■□□□ 1.51
IRF3-210ENST00000595240 UNC13BO14795 1591 aa24.46■■□□□ 1.51
IRF3-210ENST00000595240 UBR1Q8IWV7 1749 aa24.46■■□□□ 1.51
IRF3-210ENST00000595240 IQSEC2Q5JU85 1478 aa24.45■■□□□ 1.51
IRF3-210ENST00000595240 NPHP4O75161 1426 aaPredicted RBP24.45■■□□□ 1.51
IRF3-210ENST00000595240 RPRD2Q5VT52 1461 aaKnown RBP24.45■■□□□ 1.5
IRF3-210ENST00000595240 SYNMO15061 1565 aa24.43■■□□□ 1.5
IRF3-210ENST00000595240 IDI1Q13907 227 aa24.43■■□□□ 1.5
IRF3-210ENST00000595240 ARHGAP23Q9P227 1491 aa24.43■■□□□ 1.5
IRF3-210ENST00000595240 SLIT1O75093 1534 aa24.41■■□□□ 1.5
IRF3-210ENST00000595240 TET3O43151 1660 aa24.41■■□□□ 1.5
IRF3-210ENST00000595240 PIK3C2BO00750 1634 aa24.4■■□□□ 1.5
IRF3-210ENST00000595240 SCAF11Q99590 1463 aaKnown RBP24.39■■□□□ 1.5
IRF3-210ENST00000595240 SLC52A1Q9NWF4 448 aa24.38■■□□□ 1.49
IRF3-210ENST00000595240 LTKP29376 864 aa24.37■■□□□ 1.49
IRF3-210ENST00000595240 NUP155O75694 1391 aa24.37■■□□□ 1.49
IRF3-210ENST00000595240 TMEM2Q9UHN6 1383 aa24.37■■□□□ 1.49
IRF3-210ENST00000595240 IQGAP1P46940 1657 aa24.37■■□□□ 1.49
IRF3-210ENST00000595240 TXNDC2Q86VQ3 553 aa24.36■■□□□ 1.49
IRF3-210ENST00000595240 STAG3Q9UJ98 1225 aa24.36■■□□□ 1.49
IRF3-210ENST00000595240 KDM5AP29375 1690 aaKnown RBP24.36■■□□□ 1.49
IRF3-210ENST00000595240 IQGAP3Q86VI3 1631 aa24.35■■□□□ 1.49
IRF3-210ENST00000595240 GCC2Q8IWJ2 1684 aa24.34■■□□□ 1.49
IRF3-210ENST00000595240 EID1Q9Y6B2 187 aa24.34■■□□□ 1.49
IRF3-210ENST00000595240 CPS1P31327 1500 aa24.34■■□□□ 1.49
IRF3-210ENST00000595240 ADGRB3O60242 1522 aa24.32■■□□□ 1.48
IRF3-210ENST00000595240 NAIPQ13075 1403 aa24.31■■□□□ 1.48
IRF3-210ENST00000595240 E9PCH4 1651 aa24.29■■□□□ 1.48
IRF3-210ENST00000595240 HFM1A2PYH4 1435 aa24.26■■□□□ 1.47
IRF3-210ENST00000595240 UBAP1LF5GYI3 381 aa24.24■■□□□ 1.47
IRF3-210ENST00000595240 TMEM131LA2VDJ0 1609 aa24.21■■□□□ 1.47
IRF3-210ENST00000595240 ZFYVE9O95405 1425 aa24.21■■□□□ 1.47
IRF3-210ENST00000595240 STRCP1A6NGW2 1772 aa24.19■■□□□ 1.46
IRF3-210ENST00000595240 LRRC7Q96NW7 1537 aa24.18■■□□□ 1.46
IRF3-210ENST00000595240 RIMS2Q9UQ26 1411 aa24.18■■□□□ 1.46
IRF3-210ENST00000595240 CHGAP10645 457 aaKnown RBP24.16■■□□□ 1.46
IRF3-210ENST00000595240 HDGFP51858 240 aaKnown RBP24.15■■□□□ 1.46
IRF3-210ENST00000595240 SLC26A8Q96RN1 970 aa24.15■■□□□ 1.46
IRF3-210ENST00000595240 PLEKHG1Q9ULL1 1385 aa24.14■■□□□ 1.45
IRF3-210ENST00000595240 MYO5BQ9ULV0 1848 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms