RNA–Protein interactions for RNA: ENST00000594537.2

LTBP4-211, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-211ENST00000594537 DEPDC5O75140 1603 aa34.66■■■■□ 3.14
LTBP4-211ENST00000594537 PRDM15P57071 1507 aaPredicted RBP34.62■■■■□ 3.13
LTBP4-211ENST00000594537 GGT6Q6P531 493 aa34.6■■■■□ 3.13
LTBP4-211ENST00000594537 UNC13BO14795 1591 aa34.59■■■■□ 3.13
LTBP4-211ENST00000594537 HRCP23327 699 aa34.59■■■■□ 3.13
LTBP4-211ENST00000594537 ADAMTSL3P82987 1691 aa34.58■■■■□ 3.13
LTBP4-211ENST00000594537 MROH1Q8NDA8 1641 aa34.58■■■■□ 3.13
LTBP4-211ENST00000594537 KDM5DQ9BY66 1539 aa34.57■■■■□ 3.12
LTBP4-211ENST00000594537 KANK1Q14678 1352 aa34.57■■■■□ 3.12
LTBP4-211ENST00000594537 CNTLNQ9NXG0 1405 aa34.56■■■■□ 3.12
LTBP4-211ENST00000594537 MLECQ14165 292 aa34.56■■■■□ 3.12
LTBP4-211ENST00000594537 ZC3H13Q5T200 1668 aaKnown RBP34.54■■■■□ 3.12
LTBP4-211ENST00000594537 ESF1Q9H501 851 aaKnown RBP34.52■■■■□ 3.12
LTBP4-211ENST00000594537 VWDEQ8N2E2 1590 aa34.52■■■■□ 3.12
LTBP4-211ENST00000594537 RAB3GAP2Q9H2M9 1393 aa34.51■■■■□ 3.12
LTBP4-211ENST00000594537 FER1L4A9Z1Z3 1794 aa34.49■■■■□ 3.11
LTBP4-211ENST00000594537 LMTK2Q8IWU2 1503 aa34.48■■■■□ 3.11
LTBP4-211ENST00000594537 WASHC2CQ9Y4E1 1318 aa34.48■■■■□ 3.11
LTBP4-211ENST00000594537 MADDQ8WXG6 1647 aa34.47■■■■□ 3.11
LTBP4-211ENST00000594537 ABCC3O15438 1527 aa34.46■■■■□ 3.11
LTBP4-211ENST00000594537 IQGAP3Q86VI3 1631 aa34.45■■■■□ 3.11
LTBP4-211ENST00000594537 MROH2AA6NES4 1674 aa34.45■■■■□ 3.11
LTBP4-211ENST00000594537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.45■■■■□ 3.11
LTBP4-211ENST00000594537 NUP155O75694 1391 aa34.45■■■■□ 3.11
LTBP4-211ENST00000594537 PCGF6Q9BYE7 350 aa34.4■■■■□ 3.1
LTBP4-211ENST00000594537 CLTCQ00610 1675 aaKnown RBP34.4■■■■□ 3.1
LTBP4-211ENST00000594537 KDM4FA0A1W2PPD8 638 aa34.39■■■■□ 3.1
LTBP4-211ENST00000594537 TRIM52Q96A61 297 aa34.37■■■■□ 3.09
LTBP4-211ENST00000594537 RIMS1Q86UR5 1692 aaKnown RBP34.37■■■■□ 3.09
LTBP4-211ENST00000594537 ARHGAP31Q2M1Z3 1444 aa34.37■■■■□ 3.09
LTBP4-211ENST00000594537 CEP152O94986 1710 aa34.36■■■■□ 3.09
LTBP4-211ENST00000594537 TET3O43151 1660 aa34.35■■■■□ 3.09
LTBP4-211ENST00000594537 ZMYM3Q14202 1370 aa34.35■■■■□ 3.09
LTBP4-211ENST00000594537 CAMSAP1Q5T5Y3 1602 aa34.33■■■■□ 3.09
LTBP4-211ENST00000594537 EFCAB6Q5THR3 1501 aa34.32■■■■□ 3.08
LTBP4-211ENST00000594537 PTPRMP28827 1452 aa34.32■■■■□ 3.08
LTBP4-211ENST00000594537 RPRD2Q5VT52 1461 aaKnown RBP34.31■■■■□ 3.08
LTBP4-211ENST00000594537 PZPP20742 1482 aa34.3■■■■□ 3.08
LTBP4-211ENST00000594537 C3P01024 1663 aa34.26■■■■□ 3.08
LTBP4-211ENST00000594537 SLC4A1APQ9BWU0 796 aaKnown RBP34.25■■■■□ 3.07
LTBP4-211ENST00000594537 NPATQ14207 1427 aa34.24■■■■□ 3.07
LTBP4-211ENST00000594537 MPHOSPH9Q99550 1183 aa34.21■■■■□ 3.07
LTBP4-211ENST00000594537 E9PCH4 1651 aa34.18■■■■□ 3.06
LTBP4-211ENST00000594537 SPATA31D1Q6ZQQ2 1576 aa34.16■■■■□ 3.06
LTBP4-211ENST00000594537 ERVK-7P63135 1459 aa34.14■■■■□ 3.06
LTBP4-211ENST00000594537 PKD2Q13563 968 aa34.14■■■■□ 3.06
LTBP4-211ENST00000594537 CEBPAP49715 358 aaPredicted RBP34.13■■■■□ 3.05
LTBP4-211ENST00000594537 NOS1P29475 1434 aa34.13■■■■□ 3.05
LTBP4-211ENST00000594537 PREX1Q8TCU6 1659 aa34.12■■■■□ 3.05
LTBP4-211ENST00000594537 PTPRTO14522 1441 aa34.09■■■■□ 3.05
LTBP4-211ENST00000594537 SETD1BQ9UPS6 1966 aaKnown RBP34.09■■■■□ 3.05
LTBP4-211ENST00000594537 FBXO31Q5XUX0 539 aaPredicted RBP34.07■■■■□ 3.04
LTBP4-211ENST00000594537 TNRQ92752 1358 aa34.07■■■■□ 3.04
LTBP4-211ENST00000594537 SPHKAPQ2M3C7 1700 aa34.03■■■■□ 3.04
LTBP4-211ENST00000594537 SLC52A1Q9NWF4 448 aa34.02■■■■□ 3.04
LTBP4-211ENST00000594537 NLRP1Q9C000 1473 aa34.01■■■■□ 3.04
LTBP4-211ENST00000594537 TRPM2O94759 1503 aa34.01■■■■□ 3.04
LTBP4-211ENST00000594537 PLPPR3Q6T4P5 718 aa34■■■■□ 3.03
LTBP4-211ENST00000594537 SYNMO15061 1565 aa33.99■■■■□ 3.03
LTBP4-211ENST00000594537 CFAP65Q6ZU64 1925 aaKnown RBP33.99■■■■□ 3.03
LTBP4-211ENST00000594537 DHX57Q6P158 1386 aaKnown RBP33.98■■■■□ 3.03
LTBP4-211ENST00000594537 PLA2R1Q13018 1463 aa33.95■■■■□ 3.03
LTBP4-211ENST00000594537 UHRF1BP1Q6BDS2 1440 aa33.95■■■■□ 3.02
LTBP4-211ENST00000594537 MYO3AQ8NEV4 1616 aa33.94■■■■□ 3.02
LTBP4-211ENST00000594537 PIK3C2BO00750 1634 aa33.93■■■■□ 3.02
LTBP4-211ENST00000594537 FOXD1Q16676 465 aa33.92■■■■□ 3.02
LTBP4-211ENST00000594537 ANKRD30BQ9BXX2 1392 aa33.92■■■■□ 3.02
LTBP4-211ENST00000594537 A2ML1A8K2U0 1454 aa33.9■■■■□ 3.02
LTBP4-211ENST00000594537 ZNF142P52746 1687 aaPredicted RBP33.9■■■■□ 3.02
LTBP4-211ENST00000594537 KDM5AP29375 1690 aaKnown RBP33.88■■■■□ 3.01
LTBP4-211ENST00000594537 CCDC144AA2RUR9 1427 aa33.87■■■■□ 3.01
LTBP4-211ENST00000594537 CEP170BQ9Y4F5 1589 aaPredicted RBP33.87■■■■□ 3.01
LTBP4-211ENST00000594537 IDI1Q13907 227 aa33.87■■■■□ 3.01
LTBP4-211ENST00000594537 AEBP2Q6ZN18 517 aaPredicted RBP33.84■■■■□ 3.01
LTBP4-211ENST00000594537 CLTCL1P53675 1640 aa33.83■■■■□ 3.01
LTBP4-211ENST00000594537 CLSPNQ9HAW4 1339 aa33.81■■■■□ 3
LTBP4-211ENST00000594537 UGGT1Q9NYU2 1555 aa33.81■■■■□ 3
LTBP4-211ENST00000594537 ADGRB3O60242 1522 aa33.8■■■■□ 3
LTBP4-211ENST00000594537 NEURL4Q96JN8 1562 aa33.79■■■■□ 3
LTBP4-211ENST00000594537 LMTK3Q96Q04 1460 aa33.77■■■■□ 3
LTBP4-211ENST00000594537 THEMISQ8N1K5 641 aaPredicted RBP33.77■■■■□ 3
LTBP4-211ENST00000594537 UBR1Q8IWV7 1749 aa33.76■■■■□ 3
LTBP4-211ENST00000594537 KIF1BO60333 1816 aa33.75■■■□□ 2.99
LTBP4-211ENST00000594537 STAG3Q9UJ98 1225 aa33.75■■■□□ 2.99
LTBP4-211ENST00000594537 TMEM131LA2VDJ0 1609 aa33.75■■■□□ 2.99
LTBP4-211ENST00000594537 SPATA31E1Q6ZUB1 1445 aa33.68■■■□□ 2.98
LTBP4-211ENST00000594537 SLIT1O75093 1534 aa33.66■■■□□ 2.98
LTBP4-211ENST00000594537 CHGAP10645 457 aaKnown RBP33.65■■■□□ 2.98
LTBP4-211ENST00000594537 CCER1Q8TC90 406 aaPredicted RBP33.65■■■□□ 2.98
LTBP4-211ENST00000594537 ARHGAP23Q9P227 1491 aa33.64■■■□□ 2.98
LTBP4-211ENST00000594537 TMEM2Q9UHN6 1383 aa33.63■■■□□ 2.97
LTBP4-211ENST00000594537 RPGRIP1LQ68CZ1 1315 aa33.63■■■□□ 2.97
LTBP4-211ENST00000594537 HDGFP51858 240 aaKnown RBP33.63■■■□□ 2.97
LTBP4-211ENST00000594537 MYO5BQ9ULV0 1848 aa33.6■■■□□ 2.97
LTBP4-211ENST00000594537 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.58■■■□□ 2.97
LTBP4-211ENST00000594537 ZFYVE9O95405 1425 aa33.56■■■□□ 2.96
LTBP4-211ENST00000594537 ZNF326Q5BKZ1 582 aaKnown RBP33.56■■■□□ 2.96
LTBP4-211ENST00000594537 RIMS2Q9UQ26 1411 aa33.55■■■□□ 2.96
LTBP4-211ENST00000594537 STAC3Q96MF2 364 aa33.55■■■□□ 2.96
LTBP4-211ENST00000594537 EID1Q9Y6B2 187 aa33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms