RNA–Protein interactions for RNA: ENST00000594497.1

CAPN12-203, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-203ENST00000594497 KANK4Q5T7N3 995 aaPredicted RBP25.57■■□□□ 1.68
CAPN12-203ENST00000594497 PLA2R1Q13018 1463 aa25.57■■□□□ 1.68
CAPN12-203ENST00000594497 LTBP4Q8N2S1 1624 aa25.55■■□□□ 1.68
CAPN12-203ENST00000594497 MYOM3Q5VTT5 1437 aa25.54■■□□□ 1.68
CAPN12-203ENST00000594497 MIA2Q96PC5 1412 aa25.54■■□□□ 1.68
CAPN12-203ENST00000594497 PZPP20742 1482 aa25.53■■□□□ 1.68
CAPN12-203ENST00000594497 NCKAP5LQ9HCH0 1330 aa25.52■■□□□ 1.68
CAPN12-203ENST00000594497 A2ML1A8K2U0 1454 aa25.52■■□□□ 1.68
CAPN12-203ENST00000594497 TCOF1Q13428 1488 aaKnown RBP25.51■■□□□ 1.67
CAPN12-203ENST00000594497 DNMT1P26358 1616 aaKnown RBP25.51■■□□□ 1.67
CAPN12-203ENST00000594497 PKD2Q13563 968 aa25.5■■□□□ 1.67
CAPN12-203ENST00000594497 RNF17Q9BXT8 1623 aaKnown RBP25.5■■□□□ 1.67
CAPN12-203ENST00000594497 WASHC2CQ9Y4E1 1318 aa25.5■■□□□ 1.67
CAPN12-203ENST00000594497 EIF2AK4Q9P2K8 1649 aaKnown RBP25.49■■□□□ 1.67
CAPN12-203ENST00000594497 TNRQ92752 1358 aa25.48■■□□□ 1.67
CAPN12-203ENST00000594497 IQSEC2Q5JU85 1478 aa25.47■■□□□ 1.67
CAPN12-203ENST00000594497 ZC3H13Q5T200 1668 aaKnown RBP25.46■■□□□ 1.67
CAPN12-203ENST00000594497 FBXO31Q5XUX0 539 aaPredicted RBP25.45■■□□□ 1.66
CAPN12-203ENST00000594497 POLR1AO95602 1720 aaPredicted RBP25.45■■□□□ 1.66
CAPN12-203ENST00000594497 APLP2Q06481 763 aa25.44■■□□□ 1.66
CAPN12-203ENST00000594497 CROCC2H7BZ55 1655 aa25.44■■□□□ 1.66
CAPN12-203ENST00000594497 PTPN23Q9H3S7 1636 aa25.41■■□□□ 1.66
CAPN12-203ENST00000594497 ABCC3O15438 1527 aa25.41■■□□□ 1.66
CAPN12-203ENST00000594497 DUOX2Q9NRD8 1548 aa25.4■■□□□ 1.66
CAPN12-203ENST00000594497 NLRP1Q9C000 1473 aa25.4■■□□□ 1.66
CAPN12-203ENST00000594497 ZNF335Q9H4Z2 1342 aaPredicted RBP25.39■■□□□ 1.66
CAPN12-203ENST00000594497 MROH1Q8NDA8 1641 aa25.39■■□□□ 1.66
CAPN12-203ENST00000594497 SHANK2Q9UPX8 1470 aa25.38■■□□□ 1.65
CAPN12-203ENST00000594497 CEP152O94986 1710 aa25.37■■□□□ 1.65
CAPN12-203ENST00000594497 NEURL4Q96JN8 1562 aa25.35■■□□□ 1.65
CAPN12-203ENST00000594497 SPATA31D1Q6ZQQ2 1576 aa25.35■■□□□ 1.65
CAPN12-203ENST00000594497 UGGT1Q9NYU2 1555 aa25.35■■□□□ 1.65
CAPN12-203ENST00000594497 ABCC5O15440 1437 aa25.34■■□□□ 1.65
CAPN12-203ENST00000594497 KIF15Q9NS87 1388 aa25.32■■□□□ 1.64
CAPN12-203ENST00000594497 FGD6Q6ZV73 1430 aa25.32■■□□□ 1.64
CAPN12-203ENST00000594497 CFAP65Q6ZU64 1925 aaKnown RBP25.31■■□□□ 1.64
CAPN12-203ENST00000594497 THEMISQ8N1K5 641 aaPredicted RBP25.31■■□□□ 1.64
CAPN12-203ENST00000594497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.31■■□□□ 1.643e-6■■□□□ 12.8
CAPN12-203ENST00000594497 DAPK1P53355 1430 aa25.3■■□□□ 1.64
CAPN12-203ENST00000594497 ERBINQ96RT1 1412 aa25.3■■□□□ 1.64
CAPN12-203ENST00000594497 ERVK-7P63135 1459 aa25.3■■□□□ 1.64
CAPN12-203ENST00000594497 PRDM15P57071 1507 aaPredicted RBP25.29■■□□□ 1.64
CAPN12-203ENST00000594497 DEPDC5O75140 1603 aa25.29■■□□□ 1.64
CAPN12-203ENST00000594497 ANKLE2Q86XL3 938 aa25.28■■□□□ 1.64
CAPN12-203ENST00000594497 RRP7BPQ9NSQ0 103 aa25.26■■□□□ 1.63
CAPN12-203ENST00000594497 MED14O60244 1454 aa25.24■■□□□ 1.63
CAPN12-203ENST00000594497 IQGAP1P46940 1657 aa25.23■■□□□ 1.63
CAPN12-203ENST00000594497 CPS1P31327 1500 aa25.23■■□□□ 1.63
CAPN12-203ENST00000594497 UBR1Q8IWV7 1749 aa25.23■■□□□ 1.63
CAPN12-203ENST00000594497 UBAP1LF5GYI3 381 aa25.22■■□□□ 1.63
CAPN12-203ENST00000594497 NPHP4O75161 1426 aaPredicted RBP25.21■■□□□ 1.63
CAPN12-203ENST00000594497 ARHGAP31Q2M1Z3 1444 aa25.2■■□□□ 1.63
CAPN12-203ENST00000594497 ANKRD30AQ9BXX3 1397 aa25.2■■□□□ 1.63
CAPN12-203ENST00000594497 VWDEQ8N2E2 1590 aa25.19■■□□□ 1.62
CAPN12-203ENST00000594497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.17■■□□□ 1.624e-11■□□□□ 10.9
CAPN12-203ENST00000594497 CHIC2Q9UKJ5 165 aa25.17■■□□□ 1.62
CAPN12-203ENST00000594497 KANK1Q14678 1352 aa25.17■■□□□ 1.62
CAPN12-203ENST00000594497 DISP3Q9P2K9 1392 aa25.16■■□□□ 1.62
CAPN12-203ENST00000594497 ADGRL2O95490 1459 aa25.13■■□□□ 1.61
CAPN12-203ENST00000594497 LMTK2Q8IWU2 1503 aa25.12■■□□□ 1.61
CAPN12-203ENST00000594497 PIK3C2BO00750 1634 aa25.11■■□□□ 1.61
CAPN12-203ENST00000594497 SLIT1O75093 1534 aa25.1■■□□□ 1.61
CAPN12-203ENST00000594497 SCAF11Q99590 1463 aaKnown RBP25.09■■□□□ 1.61
CAPN12-203ENST00000594497 STRCP1A6NGW2 1772 aa25.09■■□□□ 1.61
CAPN12-203ENST00000594497 FAM50AQ14320 339 aaKnown RBP25.09■■□□□ 1.61
CAPN12-203ENST00000594497 ARHGAP23Q9P227 1491 aa25.09■■□□□ 1.61
CAPN12-203ENST00000594497 KDM5AP29375 1690 aaKnown RBP25.07■■□□□ 1.6
CAPN12-203ENST00000594497 EFCAB6Q5THR3 1501 aa25.06■■□□□ 1.6
CAPN12-203ENST00000594497 SYNMO15061 1565 aa25.05■■□□□ 1.6
CAPN12-203ENST00000594497 TOM1O60784 492 aa25.05■■□□□ 1.6
CAPN12-203ENST00000594497 TXNDC2Q86VQ3 553 aa25.02■■□□□ 1.6
CAPN12-203ENST00000594497 SCAF1Q9H7N4 1312 aaKnown RBP25.02■■□□□ 1.6
CAPN12-203ENST00000594497 ANKRD50Q9ULJ7 1429 aa25.02■■□□□ 1.6
CAPN12-203ENST00000594497 LTKP29376 864 aa25.01■■□□□ 1.59
CAPN12-203ENST00000594497 PIP4K2BP78356 416 aa25.01■■□□□ 1.59
CAPN12-203ENST00000594497 STAG3Q9UJ98 1225 aa25■■□□□ 1.59
CAPN12-203ENST00000594497 EID1Q9Y6B2 187 aa25■■□□□ 1.59
CAPN12-203ENST00000594497 LRRC7Q96NW7 1537 aa25■■□□□ 1.59
CAPN12-203ENST00000594497 NOS1P29475 1434 aa24.99■■□□□ 1.59
CAPN12-203ENST00000594497 TMEM2Q9UHN6 1383 aa24.99■■□□□ 1.59
CAPN12-203ENST00000594497 ILDR2Q71H61 639 aa24.98■■□□□ 1.59
CAPN12-203ENST00000594497 IDI1Q13907 227 aa24.97■■□□□ 1.59
CAPN12-203ENST00000594497 ALKQ9UM73 1620 aa24.97■■□□□ 1.59
CAPN12-203ENST00000594497 TET3O43151 1660 aa24.96■■□□□ 1.59
CAPN12-203ENST00000594497 ADGRB3O60242 1522 aa24.96■■□□□ 1.59
CAPN12-203ENST00000594497 RPRD2Q5VT52 1461 aaKnown RBP24.96■■□□□ 1.59
CAPN12-203ENST00000594497 HSPA1LP34931 641 aa24.94■■□□□ 1.58
CAPN12-203ENST00000594497 GCC2Q8IWJ2 1684 aa24.94■■□□□ 1.58
CAPN12-203ENST00000594497 UNC13BO14795 1591 aa24.93■■□□□ 1.58
CAPN12-203ENST00000594497 SLC52A1Q9NWF4 448 aa24.91■■□□□ 1.58
CAPN12-203ENST00000594497 XIRP1Q702N8 1843 aaKnown RBP24.91■■□□□ 1.58
CAPN12-203ENST00000594497 ROCK1Q13464 1354 aa24.89■■□□□ 1.57
CAPN12-203ENST00000594497 MYO5BQ9ULV0 1848 aa24.89■■□□□ 1.57
CAPN12-203ENST00000594497 E9PCH4 1651 aa24.85■■□□□ 1.57
CAPN12-203ENST00000594497 MED1Q15648 1581 aaPredicted RBP24.84■■□□□ 1.57
CAPN12-203ENST00000594497 IQGAP3Q86VI3 1631 aa24.84■■□□□ 1.57
CAPN12-203ENST00000594497 SOCS7O14512 581 aa24.84■■□□□ 1.57
CAPN12-203ENST00000594497 TMEM131LA2VDJ0 1609 aa24.82■■□□□ 1.56
CAPN12-203ENST00000594497 SLC26A8Q96RN1 970 aa24.8■■□□□ 1.56
CAPN12-203ENST00000594497 ZFYVE9O95405 1425 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms